RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 MYDGFQ969H8 173 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 TMIGD2Q96BF3 282 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 MOAP1Q96BY2 351 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 SARAFQ96BY9 339 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 ZNF524Q96C55 264 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 ZG16BQ96DA0 208 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 TMCO6Q96DC7 493 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 NEURL3Q96EH8 262 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 LRRC46Q96FV0 321 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 DACH2Q96NX9 599 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 COL21A1Q96P44 957 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 OR7D2Q96RA2 312 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 ADOQ96SZ5 270 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 EPYCQ99645 322 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 SLC39A3Q9BRY0 314 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 SLC35A5Q9BS91 424 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 ACTRT3Q9BYD9 372 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 TSPAN10Q9H1Z9 355 aaPredicted RBP4.78□□□□□ -1.64
SHMT1-211ENST00000618902 MMP27Q9H306 513 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 OR51I1Q9H343 314 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 TP63Q9H3D4 680 aaPredicted RBP4.78□□□□□ -1.64
SHMT1-211ENST00000618902 GALNT9Q9HCQ5 603 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 NEUROD4Q9HD90 331 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 ZFP64Q9NPA5 681 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 ADPRHL2Q9NX46 363 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 THUMPD1Q9NXG2 353 aaKnown RBP4.78□□□□□ -1.64
SHMT1-211ENST00000618902 COQ3Q9NZJ6 369 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.78□□□□□ -1.64
SHMT1-211ENST00000618902 KCNE5Q9UJ90 142 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 ABCG2Q9UNQ0 655 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 ERGIC3Q9Y282 383 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 PCDHB14Q9Y5E9 798 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 ANKRD17O75179 2603 aaKnown RBP4.78□□□□□ -1.64
SHMT1-211ENST00000618902 ZFHX3Q15911 3703 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 POLQO75417 2590 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 OTOGQ6ZRI0 2925 aa4.78□□□□□ -1.64
SHMT1-211ENST00000618902 SH3D21A4FU49 640 aa4.77□□□□□ -1.65
SHMT1-211ENST00000618902 ARRDC5A6NEK1 342 aa4.77□□□□□ -1.65
SHMT1-211ENST00000618902 PRAMEF25A6NGN4 478 aa4.77□□□□□ -1.65
SHMT1-211ENST00000618902 DUXAA6NLW8 204 aa4.77□□□□□ -1.65
SHMT1-211ENST00000618902 AHRRA9YTQ3 701 aa4.77□□□□□ -1.65
SHMT1-211ENST00000618902 CLIC1O00299 241 aa4.77□□□□□ -1.65
SHMT1-211ENST00000618902 RFXANKO14593 260 aa4.77□□□□□ -1.65
SHMT1-211ENST00000618902 LRRTM2O43300 516 aa4.77□□□□□ -1.65
SHMT1-211ENST00000618902 TPST1O60507 370 aa4.77□□□□□ -1.65
SHMT1-211ENST00000618902 FCMRO60667 390 aa4.77□□□□□ -1.65
SHMT1-211ENST00000618902 BCAS1O75363 584 aaPredicted RBP4.77□□□□□ -1.65
SHMT1-211ENST00000618902 REM1O75628 298 aa4.77□□□□□ -1.65
SHMT1-211ENST00000618902 CBR3O75828 277 aa4.77□□□□□ -1.65
SHMT1-211ENST00000618902 SULT1C4O75897 302 aa4.77□□□□□ -1.65
SHMT1-211ENST00000618902 GABARAPO95166 117 aa4.77□□□□□ -1.65
SHMT1-211ENST00000618902 ATE1O95260 518 aa4.77□□□□□ -1.65
SHMT1-211ENST00000618902 UTS2O95399 124 aa4.77□□□□□ -1.65
SHMT1-211ENST00000618902 AGR2O95994 175 aa4.77□□□□□ -1.65
SHMT1-211ENST00000618902 NGFRP08138 427 aa4.77□□□□□ -1.65
SHMT1-211ENST00000618902 CHRM4P08173 479 aa4.77□□□□□ -1.65
SHMT1-211ENST00000618902 GUSBP08236 651 aa4.77□□□□□ -1.65
SHMT1-211ENST00000618902 GNAO1P09471 354 aa4.77□□□□□ -1.65
SHMT1-211ENST00000618902 OCM2P0CE71 109 aa4.77□□□□□ -1.65
SHMT1-211ENST00000618902 OCMP0CE72 109 aaPredicted RBP4.77□□□□□ -1.65
SHMT1-211ENST00000618902 ETFAP13804 333 aa4.77□□□□□ -1.65
SHMT1-211ENST00000618902 MATN1P21941 496 aa4.77□□□□□ -1.65
SHMT1-211ENST00000618902 KDELR2P33947 212 aa4.77□□□□□ -1.65
SHMT1-211ENST00000618902 PTGS2P35354 604 aa4.77□□□□□ -1.65
SHMT1-211ENST00000618902 KRT20P35900 424 aa4.77□□□□□ -1.65
SHMT1-211ENST00000618902 DCTP40126 519 aa4.77□□□□□ -1.65
SHMT1-211ENST00000618902 CASP3P42574 277 aa4.77□□□□□ -1.65
SHMT1-211ENST00000618902 RFX3P48380 749 aa4.77□□□□□ -1.65
SHMT1-211ENST00000618902 CLK3P49761 638 aaKnown RBP4.77□□□□□ -1.65
SHMT1-211ENST00000618902 ENTPD1P49961 510 aa4.77□□□□□ -1.65
SHMT1-211ENST00000618902 GZMMP51124 257 aa4.77□□□□□ -1.65
SHMT1-211ENST00000618902 BMXP51813 675 aa4.77□□□□□ -1.65
SHMT1-211ENST00000618902 PRR5P85299 388 aa4.77□□□□□ -1.65
SHMT1-211ENST00000618902 ZNF45Q02386 682 aa4.77□□□□□ -1.65
SHMT1-211ENST00000618902 SRSF1Q07955 248 aaKnown RBP eCLIP4.77□□□□□ -1.65
SHMT1-211ENST00000618902 CDK5R2Q13319 367 aa4.77□□□□□ -1.65
SHMT1-211ENST00000618902 MAPK14Q16539 360 aa4.77□□□□□ -1.65
SHMT1-211ENST00000618902 BCL2A1Q16548 175 aa4.77□□□□□ -1.65
SHMT1-211ENST00000618902 SYPL1Q16563 259 aa4.77□□□□□ -1.65
SHMT1-211ENST00000618902 VMACQ2NL98 169 aa4.77□□□□□ -1.65
SHMT1-211ENST00000618902 TIMM50Q3ZCQ8 353 aa4.77□□□□□ -1.65
SHMT1-211ENST00000618902 GLYR1Q49A26 553 aaPredicted RBP4.77□□□□□ -1.65
SHMT1-211ENST00000618902 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.77□□□□□ -1.65
SHMT1-211ENST00000618902 OTUD3Q5T2D3 398 aaPredicted RBP4.77□□□□□ -1.65
SHMT1-211ENST00000618902 KDM4DQ6B0I6 523 aa4.77□□□□□ -1.65
SHMT1-211ENST00000618902 XAF1Q6GPH4 301 aa4.77□□□□□ -1.65
SHMT1-211ENST00000618902 HEPHL1Q6MZM0 1159 aa4.77□□□□□ -1.65
SHMT1-211ENST00000618902 GDPGP1Q6ZNW5 385 aa4.77□□□□□ -1.65
SHMT1-211ENST00000618902 CBLL1Q75N03 491 aa4.77□□□□□ -1.65
SHMT1-211ENST00000618902 MARCH3Q86UD3 253 aa4.77□□□□□ -1.65
SHMT1-211ENST00000618902 MISPQ8IVT2 679 aa4.77□□□□□ -1.65
SHMT1-211ENST00000618902 TMEM251Q8N6I4 163 aa4.77□□□□□ -1.65
SHMT1-211ENST00000618902 COX18Q8N8Q8 333 aa4.77□□□□□ -1.65
SHMT1-211ENST00000618902 CDRT4Q8N9R6 151 aa4.77□□□□□ -1.65
SHMT1-211ENST00000618902 WDSUB1Q8N9V3 476 aa4.77□□□□□ -1.65
SHMT1-211ENST00000618902 ZBTB8BQ8NAP8 495 aaPredicted RBP4.77□□□□□ -1.65
SHMT1-211ENST00000618902 CHDHQ8NE62 594 aaPredicted RBP4.77□□□□□ -1.65
SHMT1-211ENST00000618902 OR4C3Q8NH37 302 aa4.77□□□□□ -1.65
SHMT1-211ENST00000618902 FAM57AQ8TBR7 257 aa4.77□□□□□ -1.65
SHMT1-211ENST00000618902 RNF217Q8TC41 542 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 145.7 ms