RNA–Protein interactions for RNA: ENST00000616944.4

CBWD1-225, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-225ENST00000616944 HTR3AP46098 478 aa13.75□□□□□ -0.21
CBWD1-225ENST00000616944 CD97P48960 835 aa13.75□□□□□ -0.21
CBWD1-225ENST00000616944 ZNF41P51814 821 aaPredicted RBP13.75□□□□□ -0.21
CBWD1-225ENST00000616944 POLR2HP52434 150 aaKnown RBP13.75□□□□□ -0.21
CBWD1-225ENST00000616944 CTBP2P56545 445 aa13.75□□□□□ -0.21
CBWD1-225ENST00000616944 DSCR4P56555 118 aaPredicted RBP13.75□□□□□ -0.21
CBWD1-225ENST00000616944 PRKCDQ05655 676 aa13.75□□□□□ -0.21
CBWD1-225ENST00000616944 FOXF1Q12946 379 aa13.75□□□□□ -0.21
CBWD1-225ENST00000616944 TMEM44Q2T9K0 475 aa13.75□□□□□ -0.21
CBWD1-225ENST00000616944 SLC25A25Q6KCM7 469 aa13.75□□□□□ -0.21
CBWD1-225ENST00000616944 CD300LDQ6UXZ3 194 aa13.75□□□□□ -0.21
CBWD1-225ENST00000616944 PRICKLE2Q7Z3G6 844 aa13.75□□□□□ -0.21
CBWD1-225ENST00000616944 SULF2Q8IWU5 870 aa13.75□□□□□ -0.21
CBWD1-225ENST00000616944 PARP8Q8N3A8 854 aa13.75□□□□□ -0.21
CBWD1-225ENST00000616944 PFN4Q8NHR9 129 aa13.75□□□□□ -0.21
CBWD1-225ENST00000616944 RNF217Q8TC41 542 aa13.75□□□□□ -0.21
CBWD1-225ENST00000616944 POC1BQ8TC44 478 aa13.75□□□□□ -0.21
CBWD1-225ENST00000616944 ZFP64Q9NPA5 681 aa13.75□□□□□ -0.21
CBWD1-225ENST00000616944 KIF17Q9P2E2 1029 aa13.75□□□□□ -0.21
CBWD1-225ENST00000616944 C15orf41Q9Y2V0 281 aa13.75□□□□□ -0.21
CBWD1-225ENST00000616944 MED31Q9Y3C7 131 aa13.75□□□□□ -0.21
CBWD1-225ENST00000616944 TMED7-TICAM2A0A0A6YYA0 188 aa13.74□□□□□ -0.21
CBWD1-225ENST00000616944 ELOA3DA6NLF2 546 aaPredicted RBP13.74□□□□□ -0.21
CBWD1-225ENST00000616944 MITFO75030 526 aaPredicted RBP13.74□□□□□ -0.21
CBWD1-225ENST00000616944 NPIPB7O75200 414 aa13.74□□□□□ -0.21
CBWD1-225ENST00000616944 RFPL3SP0C7P2 107 aa13.74□□□□□ -0.21
CBWD1-225ENST00000616944 CD46P15529 392 aa13.74□□□□□ -0.21
CBWD1-225ENST00000616944 ADH6P28332 368 aa13.74□□□□□ -0.21
CBWD1-225ENST00000616944 APOBEC1P41238 236 aaKnown RBP13.74□□□□□ -0.21
CBWD1-225ENST00000616944 GSSP48637 474 aa13.74□□□□□ -0.21
CBWD1-225ENST00000616944 RFX4Q33E94 735 aa13.74□□□□□ -0.21
CBWD1-225ENST00000616944 ELOA3BQ3SY89 546 aa13.74□□□□□ -0.21
CBWD1-225ENST00000616944 BORAQ6PGQ7 559 aa13.74□□□□□ -0.21
CBWD1-225ENST00000616944 TTC33Q6PID6 262 aaPredicted RBP13.74□□□□□ -0.21
CBWD1-225ENST00000616944 KLHL17Q6TDP4 642 aa13.74□□□□□ -0.21
CBWD1-225ENST00000616944 GALNTL5Q7Z4T8 443 aa13.74□□□□□ -0.21
CBWD1-225ENST00000616944 ELOA3Q8NG57 546 aa13.74□□□□□ -0.21
CBWD1-225ENST00000616944 PIGXQ8TBF5 258 aa13.74□□□□□ -0.21
CBWD1-225ENST00000616944 DNAJC9Q8WXX5 260 aa13.74□□□□□ -0.21
CBWD1-225ENST00000616944 ZBTB8AQ96BR9 441 aa13.74□□□□□ -0.21
CBWD1-225ENST00000616944 FAM46AQ96IP4 442 aaKnown RBP13.74□□□□□ -0.21
CBWD1-225ENST00000616944 JSRP1Q96MG2 331 aaPredicted RBP13.74□□□□□ -0.21
CBWD1-225ENST00000616944 KLHL1Q9NR64 748 aa13.74□□□□□ -0.21
CBWD1-225ENST00000616944 KRT84Q9NSB2 600 aa13.74□□□□□ -0.21
CBWD1-225ENST00000616944 BOKQ9UMX3 212 aaPredicted RBP13.74□□□□□ -0.21
CBWD1-225ENST00000616944 POFUT2Q9Y2G5 429 aa13.74□□□□□ -0.21
CBWD1-225ENST00000616944 TMED7Q9Y3B3 224 aa13.74□□□□□ -0.21
CBWD1-225ENST00000616944 PKD1L2Q7Z442 2459 aa13.73□□□□□ -0.21
CBWD1-225ENST00000616944 TMEM8BA6NDV4 472 aa13.73□□□□□ -0.21
CBWD1-225ENST00000616944 E9PQ18 207 aa13.73□□□□□ -0.21
CBWD1-225ENST00000616944 EFNA2O43921 213 aa13.73□□□□□ -0.21
CBWD1-225ENST00000616944 ZIC3O60481 467 aa13.73□□□□□ -0.21
CBWD1-225ENST00000616944 TP53P04637 393 aaPredicted RBP13.73□□□□□ -0.21
CBWD1-225ENST00000616944 POU2F1P14859 743 aa13.73□□□□□ -0.21
CBWD1-225ENST00000616944 FPR3P25089 353 aa13.73□□□□□ -0.21
CBWD1-225ENST00000616944 DPP4P27487 766 aa13.73□□□□□ -0.21
CBWD1-225ENST00000616944 SRD5A2P31213 254 aa13.73□□□□□ -0.21
CBWD1-225ENST00000616944 IFNGR2P38484 337 aa13.73□□□□□ -0.21
CBWD1-225ENST00000616944 RAD23AP54725 363 aa13.73□□□□□ -0.21
CBWD1-225ENST00000616944 FOXK1P85037 733 aa13.73□□□□□ -0.21
CBWD1-225ENST00000616944 MERTKQ12866 999 aa13.73□□□□□ -0.21
CBWD1-225ENST00000616944 HYAL4Q2M3T9 481 aa13.73□□□□□ -0.21
CBWD1-225ENST00000616944 ZNF766Q5HY98 468 aa13.73□□□□□ -0.21
CBWD1-225ENST00000616944 TMPRSS11FQ6ZWK6 438 aa13.73□□□□□ -0.21
CBWD1-225ENST00000616944 RRM2BQ7LG56 351 aa13.73□□□□□ -0.21
CBWD1-225ENST00000616944 GALNT5Q7Z7M9 940 aa13.73□□□□□ -0.21
CBWD1-225ENST00000616944 GTPBP8Q8N3Z3 284 aaPredicted RBP13.73□□□□□ -0.21
CBWD1-225ENST00000616944 ZFP62Q8NB50 900 aaPredicted RBP13.73□□□□□ -0.21
CBWD1-225ENST00000616944 SLC39A7Q92504 469 aa13.73□□□□□ -0.21
CBWD1-225ENST00000616944 GTPBP3Q969Y2 492 aaKnown RBP13.73□□□□□ -0.21
CBWD1-225ENST00000616944 BPIFA2Q96DR5 249 aa13.73□□□□□ -0.21
CBWD1-225ENST00000616944 C5orf34Q96MH7 638 aa13.73□□□□□ -0.21
CBWD1-225ENST00000616944 MBOAT4Q96T53 435 aa13.73□□□□□ -0.21
CBWD1-225ENST00000616944 GABARAPL3Q9BY60 117 aa13.73□□□□□ -0.21
CBWD1-225ENST00000616944 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.73□□□□□ -0.21
CBWD1-225ENST00000616944 TOR3AQ9H497 397 aa13.73□□□□□ -0.21
CBWD1-225ENST00000616944 ZNF703Q9H7S9 590 aaPredicted RBP13.73□□□□□ -0.21
CBWD1-225ENST00000616944 PAPOLBQ9NRJ5 636 aaKnown RBP13.73□□□□□ -0.21
CBWD1-225ENST00000616944 REV1Q9UBZ9 1251 aa13.73□□□□□ -0.21
CBWD1-225ENST00000616944 MRPS18CQ9Y3D5 142 aaKnown RBP13.73□□□□□ -0.21
CBWD1-225ENST00000616944 LRRC42Q9Y546 428 aa13.73□□□□□ -0.21
CBWD1-225ENST00000616944 TMEM72A0PK05 275 aa13.72□□□□□ -0.21
CBWD1-225ENST00000616944 SHISA8B8ZZ34 492 aa13.72□□□□□ -0.21
CBWD1-225ENST00000616944 KPNA4O00629 521 aaPredicted RBP13.72□□□□□ -0.21
CBWD1-225ENST00000616944 CDC42EP2O14613 210 aa13.72□□□□□ -0.21
CBWD1-225ENST00000616944 SUSD5O60279 629 aa13.72□□□□□ -0.21
CBWD1-225ENST00000616944 GLSO94925 669 aaPredicted RBP13.72□□□□□ -0.21
CBWD1-225ENST00000616944 MAKP20794 623 aa13.72□□□□□ -0.21
CBWD1-225ENST00000616944 CXCR1P25024 350 aa13.72□□□□□ -0.21
CBWD1-225ENST00000616944 EIF1P41567 113 aaKnown RBP13.72□□□□□ -0.21
CBWD1-225ENST00000616944 GPR4P46093 362 aa13.72□□□□□ -0.21
CBWD1-225ENST00000616944 HSPA13P48723 471 aa13.72□□□□□ -0.21
CBWD1-225ENST00000616944 MAP2K6P52564 334 aa13.72□□□□□ -0.21
CBWD1-225ENST00000616944 TSPAN31Q12999 210 aa13.72□□□□□ -0.21
CBWD1-225ENST00000616944 TBR1Q16650 682 aa13.72□□□□□ -0.21
CBWD1-225ENST00000616944 MEX3DQ86XN8 651 aaKnown RBP13.72□□□□□ -0.21
CBWD1-225ENST00000616944 P3H2Q8IVL5 708 aa13.72□□□□□ -0.21
CBWD1-225ENST00000616944 TMEM178AQ8NBL3 297 aa13.72□□□□□ -0.21
CBWD1-225ENST00000616944 ADI1Q9BV57 179 aa13.72□□□□□ -0.21
CBWD1-225ENST00000616944 ZNF556Q9HAH1 456 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms