RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 CD163Q86VB7 1156 aa11.86□□□□□ -0.51
TCF4-248ENST00000616053 ACVR1CQ8NER5 493 aa11.86□□□□□ -0.51
TCF4-248ENST00000616053 SECTM1Q8WVN6 248 aa11.86□□□□□ -0.51
TCF4-248ENST00000616053 BRI3BPQ8WY22 251 aa11.86□□□□□ -0.51
TCF4-248ENST00000616053 CGREF1Q99674 301 aa11.86□□□□□ -0.51
TCF4-248ENST00000616053 GCGP01275 180 aa11.86□□□□□ -0.51
TCF4-248ENST00000616053 SGSHP51688 502 aa11.86□□□□□ -0.51
TCF4-248ENST00000616053 PIGFQ07326 219 aa11.86□□□□□ -0.51
TCF4-248ENST00000616053 VASH2Q86V25 355 aa11.86□□□□□ -0.51
TCF4-248ENST00000616053 RBM15BQ8NDT2 890 aaKnown RBP11.86□□□□□ -0.51
TCF4-248ENST00000616053 FYTTD1Q96QD9 318 aaKnown RBP11.86□□□□□ -0.51
TCF4-248ENST00000616053 FCRL5Q96RD9 977 aa11.86□□□□□ -0.51
TCF4-248ENST00000616053 APOOQ9BUR5 198 aa11.86□□□□□ -0.51
TCF4-248ENST00000616053 NAGKQ9UJ70 344 aa11.86□□□□□ -0.51
TCF4-248ENST00000616053 PIPP12273 146 aaPredicted RBP11.86□□□□□ -0.51
TCF4-248ENST00000616053 RPA2P15927 270 aa11.86□□□□□ -0.51
TCF4-248ENST00000616053 ZP2Q05996 745 aa11.86□□□□□ -0.51
TCF4-248ENST00000616053 SPOCK1Q08629 439 aa11.86□□□□□ -0.51
TCF4-248ENST00000616053 MEP1BQ16820 701 aa11.86□□□□□ -0.51
TCF4-248ENST00000616053 TAMM41Q96BW9 452 aa11.86□□□□□ -0.51
TCF4-248ENST00000616053 SPACA1Q9HBV2 294 aa11.86□□□□□ -0.51
TCF4-248ENST00000616053 UFSP2Q9NUQ7 469 aa11.86□□□□□ -0.51
TCF4-248ENST00000616053 DNMT3BQ9UBC3 853 aaKnown RBP11.86□□□□□ -0.51
TCF4-248ENST00000616053 FBXL17Q9UF56 701 aa11.86□□□□□ -0.51
TCF4-248ENST00000616053 CST3P01034 146 aaPredicted RBP11.86□□□□□ -0.51
TCF4-248ENST00000616053 HTRA3P83110 453 aa11.86□□□□□ -0.51
TCF4-248ENST00000616053 LIPKQ5VXJ0 399 aa11.86□□□□□ -0.51
TCF4-248ENST00000616053 OR4A4PQ8NGN8 299 aa11.86□□□□□ -0.51
TCF4-248ENST00000616053 HAS1Q92839 578 aa11.86□□□□□ -0.51
TCF4-248ENST00000616053 NT5C3BQ969T7 300 aa11.86□□□□□ -0.51
TCF4-248ENST00000616053 RDH14Q9HBH5 336 aa11.86□□□□□ -0.51
TCF4-248ENST00000616053 GALPQ9UBC7 116 aa11.86□□□□□ -0.51
TCF4-248ENST00000616053 XRCC2O43543 280 aa11.86□□□□□ -0.51
TCF4-248ENST00000616053 TNFSF15O95150 251 aa11.86□□□□□ -0.51
TCF4-248ENST00000616053 ETFAP13804 333 aa11.86□□□□□ -0.51
TCF4-248ENST00000616053 CLEC20AQ6ZU45 233 aa11.86□□□□□ -0.51
TCF4-248ENST00000616053 FBXO17Q96EF6 278 aa11.86□□□□□ -0.51
TCF4-248ENST00000616053 C8BP07358 591 aa11.86□□□□□ -0.51
TCF4-248ENST00000616053 TAS2R38P59533 333 aa11.86□□□□□ -0.51
TCF4-248ENST00000616053 TAS2R60P59551 318 aa11.86□□□□□ -0.51
TCF4-248ENST00000616053 DAG1Q14118 895 aa11.86□□□□□ -0.51
TCF4-248ENST00000616053 ENTPD8Q5MY95 495 aa11.86□□□□□ -0.51
TCF4-248ENST00000616053 THNSL2Q86YJ6 484 aa11.86□□□□□ -0.51
TCF4-248ENST00000616053 C3orf58Q8NDZ4 430 aa11.86□□□□□ -0.51
TCF4-248ENST00000616053 EMG1Q92979 244 aaKnown RBP11.86□□□□□ -0.51
TCF4-248ENST00000616053 SLCO1B3Q9NPD5 702 aa11.86□□□□□ -0.51
TCF4-248ENST00000616053 TIMM9Q9Y5J7 89 aa11.86□□□□□ -0.51
TCF4-248ENST00000616053 KCTD20Q7Z5Y7 419 aa11.85□□□□□ -0.51
TCF4-248ENST00000616053 MOB3BQ86TA1 216 aa11.85□□□□□ -0.51
TCF4-248ENST00000616053 MIB2Q96AX9 1013 aa11.85□□□□□ -0.51
TCF4-248ENST00000616053 INIPQ9NRY2 104 aa11.85□□□□□ -0.51
TCF4-248ENST00000616053 GABRQQ9UN88 632 aa11.85□□□□□ -0.51
TCF4-248ENST00000616053 Q9Y3F1 56 aa11.85□□□□□ -0.51
TCF4-248ENST00000616053 ASXL3Q9C0F0 2248 aa11.85□□□□□ -0.51
TCF4-248ENST00000616053 HIDE1A8MVS5 230 aa11.85□□□□□ -0.51
TCF4-248ENST00000616053 SOCS6O14544 535 aa11.85□□□□□ -0.51
TCF4-248ENST00000616053 TSEN54Q7Z6J9 526 aaKnown RBP11.85□□□□□ -0.51
TCF4-248ENST00000616053 OR5AS1Q8N127 324 aa11.85□□□□□ -0.51
TCF4-248ENST00000616053 SARAFQ96BY9 339 aa11.85□□□□□ -0.51
TCF4-248ENST00000616053 FBXO45P0C2W1 286 aa11.85□□□□□ -0.51
TCF4-248ENST00000616053 POU3F1Q03052 451 aaPredicted RBP11.85□□□□□ -0.51
TCF4-248ENST00000616053 MEX3DQ86XN8 651 aaKnown RBP11.85□□□□□ -0.51
TCF4-248ENST00000616053 TEX26Q8N6G2 289 aa11.85□□□□□ -0.51
TCF4-248ENST00000616053 MRIQ9BWK5 157 aa11.85□□□□□ -0.51
TCF4-248ENST00000616053 CACNG6Q9BXT2 260 aa11.85□□□□□ -0.51
TCF4-248ENST00000616053 GDE1Q9NZC3 331 aa11.85□□□□□ -0.51
TCF4-248ENST00000616053 TSPAN11A1L157 253 aa11.85□□□□□ -0.51
TCF4-248ENST00000616053 BLACEA4D250 179 aa11.85□□□□□ -0.51
TCF4-248ENST00000616053 KDM4EB2RXH2 506 aaPredicted RBP11.85□□□□□ -0.51
TCF4-248ENST00000616053 IQCF3P0C7M6 154 aa11.85□□□□□ -0.51
TCF4-248ENST00000616053 TRHRP34981 398 aaPredicted RBP11.85□□□□□ -0.51
TCF4-248ENST00000616053 VWA5B2Q8N398 1253 aa11.85□□□□□ -0.51
TCF4-248ENST00000616053 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.85□□□□□ -0.51
TCF4-248ENST00000616053 RTP4Q96DX8 246 aa11.85□□□□□ -0.51
TCF4-248ENST00000616053 SEC22AQ96IW7 307 aa11.85□□□□□ -0.51
TCF4-248ENST00000616053 OR4K3Q96R72 315 aa11.85□□□□□ -0.51
TCF4-248ENST00000616053 F8W036 122 aa11.85□□□□□ -0.51
TCF4-248ENST00000616053 GALR2O43603 387 aaPredicted RBP11.85□□□□□ -0.51
TCF4-248ENST00000616053 FOXD2O60548 495 aaPredicted RBP11.85□□□□□ -0.51
TCF4-248ENST00000616053 ARSBP15848 533 aa11.85□□□□□ -0.51
TCF4-248ENST00000616053 SOX18P35713 384 aa11.85□□□□□ -0.51
TCF4-248ENST00000616053 BLOC1S1P78537 153 aa11.85□□□□□ -0.51
TCF4-248ENST00000616053 PCGF3Q3KNV8 242 aa11.85□□□□□ -0.51
TCF4-248ENST00000616053 PLA1AQ53H76 456 aa11.85□□□□□ -0.51
TCF4-248ENST00000616053 HES5Q5TA89 166 aa11.85□□□□□ -0.51
TCF4-248ENST00000616053 FCRLBQ6BAA4 426 aa11.85□□□□□ -0.51
TCF4-248ENST00000616053 MOB1BQ7L9L4 216 aa11.85□□□□□ -0.51
TCF4-248ENST00000616053 SCRN2Q96FV2 425 aa11.85□□□□□ -0.51
TCF4-248ENST00000616053 GRAMD2BQ96HH9 432 aa11.85□□□□□ -0.51
TCF4-248ENST00000616053 ANKRD19PQ9H560 264 aa11.85□□□□□ -0.51
TCF4-248ENST00000616053 MEIS3P2A8K0S8 358 aa11.85□□□□□ -0.51
TCF4-248ENST00000616053 CREG1O75629 220 aa11.85□□□□□ -0.51
TCF4-248ENST00000616053 OR5H8P0DN80 308 aa11.85□□□□□ -0.51
TCF4-248ENST00000616053 PRSS3P35030 304 aa11.85□□□□□ -0.51
TCF4-248ENST00000616053 PRKCIP41743 596 aa11.85□□□□□ -0.51
TCF4-248ENST00000616053 SLC7A9P82251 487 aa11.85□□□□□ -0.51
TCF4-248ENST00000616053 SLC22A10Q63ZE4 541 aa11.85□□□□□ -0.51
TCF4-248ENST00000616053 ZNF382Q96SR6 550 aa11.85□□□□□ -0.51
TCF4-248ENST00000616053 WDR83Q9BRX9 315 aaKnown RBP11.85□□□□□ -0.51
TCF4-248ENST00000616053 CCDC106Q9BWC9 280 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms