RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 TRAM2Q15035 370 aa7.27□□□□□ -1.25
PCDH9-205ENST00000614931 SNCBQ16143 134 aa7.27□□□□□ -1.25
PCDH9-205ENST00000614931 SLC25A53Q5H9E4 307 aa7.27□□□□□ -1.25
PCDH9-205ENST00000614931 ZNF766Q5HY98 468 aa7.27□□□□□ -1.25
PCDH9-205ENST00000614931 ALG10BQ5I7T1 473 aa7.27□□□□□ -1.25
PCDH9-205ENST00000614931 RNFT1Q5M7Z0 435 aa7.27□□□□□ -1.25
PCDH9-205ENST00000614931 OTUD3Q5T2D3 398 aaPredicted RBP7.27□□□□□ -1.25
PCDH9-205ENST00000614931 SHQ1Q6PI26 577 aaKnown RBP7.27□□□□□ -1.25
PCDH9-205ENST00000614931 STK32CQ86UX6 486 aa7.27□□□□□ -1.25
PCDH9-205ENST00000614931 SVOPLQ8N434 492 aa7.27□□□□□ -1.25
PCDH9-205ENST00000614931 CBR4Q8N4T8 237 aa7.27□□□□□ -1.25
PCDH9-205ENST00000614931 OR10G2Q8NGC3 310 aa7.27□□□□□ -1.25
PCDH9-205ENST00000614931 OR4K5Q8NGD3 323 aa7.27□□□□□ -1.25
PCDH9-205ENST00000614931 OR5M1Q8NGP8 315 aa7.27□□□□□ -1.25
PCDH9-205ENST00000614931 ZNF563Q8TA94 476 aa7.27□□□□□ -1.25
PCDH9-205ENST00000614931 GIPC3Q8TF64 312 aa7.27□□□□□ -1.25
PCDH9-205ENST00000614931 NR4A3Q92570 626 aa7.27□□□□□ -1.25
PCDH9-205ENST00000614931 SLC38A4Q969I6 547 aa7.27□□□□□ -1.25
PCDH9-205ENST00000614931 RELTQ969Z4 430 aa7.27□□□□□ -1.25
PCDH9-205ENST00000614931 C1GALT1C1Q96EU7 318 aa7.27□□□□□ -1.25
PCDH9-205ENST00000614931 GPA33Q99795 319 aa7.27□□□□□ -1.25
PCDH9-205ENST00000614931 NIPSNAP1Q9BPW8 284 aa7.27□□□□□ -1.25
PCDH9-205ENST00000614931 FAM173AQ9BQD7 235 aa7.27□□□□□ -1.25
PCDH9-205ENST00000614931 BDH2Q9BUT1 245 aa7.27□□□□□ -1.25
PCDH9-205ENST00000614931 ZNF426Q9BUY5 554 aa7.27□□□□□ -1.25
PCDH9-205ENST00000614931 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.27□□□□□ -1.25
PCDH9-205ENST00000614931 UBQLN3Q9H347 655 aa7.27□□□□□ -1.25
PCDH9-205ENST00000614931 ANKRD19PQ9H560 264 aa7.27□□□□□ -1.25
PCDH9-205ENST00000614931 MEPEQ9NQ76 525 aaPredicted RBP7.27□□□□□ -1.25
PCDH9-205ENST00000614931 SDHAF3Q9NRP4 125 aa7.27□□□□□ -1.25
PCDH9-205ENST00000614931 PDP1Q9P0J1 537 aaPredicted RBP7.27□□□□□ -1.25
PCDH9-205ENST00000614931 STOML1Q9UBI4 398 aa7.27□□□□□ -1.25
PCDH9-205ENST00000614931 RPS6KB2Q9UBS0 482 aa7.27□□□□□ -1.25
PCDH9-205ENST00000614931 C15orf41Q9Y2V0 281 aa7.27□□□□□ -1.25
PCDH9-205ENST00000614931 A0A087WUJ7 227 aa7.26□□□□□ -1.25
PCDH9-205ENST00000614931 TMED7-TICAM2A0A0A6YYA0 188 aa7.26□□□□□ -1.25
PCDH9-205ENST00000614931 ZC3H12DA2A288 527 aaKnown RBP7.26□□□□□ -1.25
PCDH9-205ENST00000614931 C7orf72A4D263 438 aa7.26□□□□□ -1.25
PCDH9-205ENST00000614931 FAM166BA8MTA8 275 aa7.26□□□□□ -1.25
PCDH9-205ENST00000614931 LRRN3E7EW58 273 aa7.26□□□□□ -1.25
PCDH9-205ENST00000614931 KPNA4O00629 521 aaPredicted RBP7.26□□□□□ -1.25
PCDH9-205ENST00000614931 CDK2AP1O14519 115 aa7.26□□□□□ -1.25
PCDH9-205ENST00000614931 KLF4O43474 513 aa7.26□□□□□ -1.25
PCDH9-205ENST00000614931 ZIC3O60481 467 aa7.26□□□□□ -1.25
PCDH9-205ENST00000614931 MITFO75030 526 aaPredicted RBP7.26□□□□□ -1.25
PCDH9-205ENST00000614931 WISP2O76076 250 aa7.26□□□□□ -1.25
PCDH9-205ENST00000614931 GLSO94925 669 aaPredicted RBP7.26□□□□□ -1.25
PCDH9-205ENST00000614931 CCNB2O95067 398 aa7.26□□□□□ -1.25
PCDH9-205ENST00000614931 AGFG2O95081 481 aa7.26□□□□□ -1.25
PCDH9-205ENST00000614931 RASAL1O95294 804 aa7.26□□□□□ -1.25
PCDH9-205ENST00000614931 TP53P04637 393 aaPredicted RBP7.26□□□□□ -1.25
PCDH9-205ENST00000614931 ALPLP05186 524 aa7.26□□□□□ -1.25
PCDH9-205ENST00000614931 CELA3AP09093 270 aa7.26□□□□□ -1.25
PCDH9-205ENST00000614931 THRBP10828 461 aa7.26□□□□□ -1.25
PCDH9-205ENST00000614931 HK1P19367 917 aa7.26□□□□□ -1.25
PCDH9-205ENST00000614931 FUT1P19526 365 aa7.26□□□□□ -1.25
PCDH9-205ENST00000614931 CCNA2P20248 432 aa7.26□□□□□ -1.25
PCDH9-205ENST00000614931 MAKP20794 623 aa7.26□□□□□ -1.25
PCDH9-205ENST00000614931 CBLP22681 906 aa7.26□□□□□ -1.25
PCDH9-205ENST00000614931 DPP4P27487 766 aa7.26□□□□□ -1.25
PCDH9-205ENST00000614931 SHC1P29353 583 aa7.26□□□□□ -1.25
PCDH9-205ENST00000614931 SLC1A3P43003 542 aa7.26□□□□□ -1.25
PCDH9-205ENST00000614931 OMPP47874 163 aa7.26□□□□□ -1.25
PCDH9-205ENST00000614931 AQP4P55087 323 aa7.26□□□□□ -1.25
PCDH9-205ENST00000614931 B3GALT5-AS1P59052 145 aa7.26□□□□□ -1.25
PCDH9-205ENST00000614931 PPP2R2BQ00005 443 aa7.26□□□□□ -1.25
PCDH9-205ENST00000614931 EGR4Q05215 589 aa7.26□□□□□ -1.25
PCDH9-205ENST00000614931 MERTKQ12866 999 aa7.26□□□□□ -1.25
PCDH9-205ENST00000614931 DAG1Q14118 895 aa7.26□□□□□ -1.25
PCDH9-205ENST00000614931 MICAQ29983 383 aa7.26□□□□□ -1.25
PCDH9-205ENST00000614931 TMEM44Q2T9K0 475 aa7.26□□□□□ -1.25
PCDH9-205ENST00000614931 EIF2S3LQ2VIR3 472 aaKnown RBP7.26□□□□□ -1.25
PCDH9-205ENST00000614931 DCST1Q5T197 706 aa7.26□□□□□ -1.25
PCDH9-205ENST00000614931 C1QL3Q5VWW1 255 aa7.26□□□□□ -1.25
PCDH9-205ENST00000614931 RPUSD3Q6P087 351 aaKnown RBP7.26□□□□□ -1.25
PCDH9-205ENST00000614931 PGBD2Q6P3X8 592 aa7.26□□□□□ -1.25
PCDH9-205ENST00000614931 FAHD1Q6P587 224 aa7.26□□□□□ -1.25
PCDH9-205ENST00000614931 POMZP3Q6PJE2 187 aa7.26□□□□□ -1.25
PCDH9-205ENST00000614931 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.26□□□□□ -1.25
PCDH9-205ENST00000614931 ZER1Q7Z7L7 766 aa7.26□□□□□ -1.25
PCDH9-205ENST00000614931 YRDCQ86U90 279 aaKnown RBP7.26□□□□□ -1.25
PCDH9-205ENST00000614931 PACS2Q86VP3 889 aa7.26□□□□□ -1.25
PCDH9-205ENST00000614931 ADGRG3Q86Y34 549 aa7.26□□□□□ -1.25
PCDH9-205ENST00000614931 HIPK1Q86Z02 1210 aa7.26□□□□□ -1.25
PCDH9-205ENST00000614931 NRMQ8IXM6 262 aa7.26□□□□□ -1.25
PCDH9-205ENST00000614931 GALNT4Q8N4A0 578 aa7.26□□□□□ -1.25
PCDH9-205ENST00000614931 TMEM251Q8N6I4 163 aa7.26□□□□□ -1.25
PCDH9-205ENST00000614931 OR1J4Q8NGS1 313 aa7.26□□□□□ -1.25
PCDH9-205ENST00000614931 PRR7Q8TB68 274 aa7.26□□□□□ -1.25
PCDH9-205ENST00000614931 RNF217Q8TC41 542 aa7.26□□□□□ -1.25
PCDH9-205ENST00000614931 SSC4DQ8WTU2 575 aa7.26□□□□□ -1.25
PCDH9-205ENST00000614931 DNAJA4Q8WW22 397 aaPredicted RBP7.26□□□□□ -1.25
PCDH9-205ENST00000614931 TMEM239Q8WW34 195 aa7.26□□□□□ -1.25
PCDH9-205ENST00000614931 ACOT11Q8WXI4 607 aaPredicted RBP7.26□□□□□ -1.25
PCDH9-205ENST00000614931 ST8SIA1Q92185 356 aa7.26□□□□□ -1.25
PCDH9-205ENST00000614931 DNAJA3Q96EY1 480 aa7.26□□□□□ -1.25
PCDH9-205ENST00000614931 NRBF2Q96F24 287 aa7.26□□□□□ -1.25
PCDH9-205ENST00000614931 C5orf34Q96MH7 638 aa7.26□□□□□ -1.25
PCDH9-205ENST00000614931 FEVQ99581 238 aa7.26□□□□□ -1.25
PCDH9-205ENST00000614931 PSD2Q9BQI7 771 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms