RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 ZNF385AQ96PM9 386 aaKnown RBP5.07□□□□□ -1.6
CPNE3-208ENST00000614678 RMND5AQ9H871 391 aa5.07□□□□□ -1.6
CPNE3-208ENST00000614678 MRPS18CQ9Y3D5 142 aaKnown RBP5.07□□□□□ -1.6
CPNE3-208ENST00000614678 IGKV1D-42A0A075B6H8 117 aa5.06□□□□□ -1.6
CPNE3-208ENST00000614678 TMED7-TICAM2A0A0A6YYA0 188 aa5.06□□□□□ -1.6
CPNE3-208ENST00000614678 LYZL6O75951 148 aa5.06□□□□□ -1.6
CPNE3-208ENST00000614678 ARAFP10398 606 aa5.06□□□□□ -1.6
CPNE3-208ENST00000614678 SLC6A2P23975 617 aa5.06□□□□□ -1.6
CPNE3-208ENST00000614678 RPS5P46782 204 aaKnown RBP5.06□□□□□ -1.6
CPNE3-208ENST00000614678 HSP90B2PQ58FF3 399 aa5.06□□□□□ -1.6
CPNE3-208ENST00000614678 TMEM200AQ86VY9 491 aa5.06□□□□□ -1.6
CPNE3-208ENST00000614678 MEIOBQ8N635 442 aa5.06□□□□□ -1.6
CPNE3-208ENST00000614678 LRRC17Q8N6Y2 441 aa5.06□□□□□ -1.6
CPNE3-208ENST00000614678 FAM86B1Q8N7N1 296 aa5.06□□□□□ -1.6
CPNE3-208ENST00000614678 TOR1AIP2Q8NFQ8 470 aa5.06□□□□□ -1.6
CPNE3-208ENST00000614678 OR52E4Q8NGH9 312 aa5.06□□□□□ -1.6
CPNE3-208ENST00000614678 RNF217Q8TC41 542 aa5.06□□□□□ -1.6
CPNE3-208ENST00000614678 C3orf49Q96BT1 292 aa5.06□□□□□ -1.6
CPNE3-208ENST00000614678 LRRC58Q96CX6 371 aa5.06□□□□□ -1.6
CPNE3-208ENST00000614678 PRRG4Q9BZD6 226 aa5.06□□□□□ -1.6
CPNE3-208ENST00000614678 MTHFD2LQ9H903 347 aaPredicted RBP5.06□□□□□ -1.6
CPNE3-208ENST00000614678 RHCGQ9UBD6 479 aa5.06□□□□□ -1.6
CPNE3-208ENST00000614678 ZNF629Q9UEG4 869 aaPredicted RBP5.06□□□□□ -1.6
CPNE3-208ENST00000614678 CHRNA9Q9UGM1 479 aa5.06□□□□□ -1.6
CPNE3-208ENST00000614678 TMED7Q9Y3B3 224 aa5.06□□□□□ -1.6
CPNE3-208ENST00000614678 CFAP73A6NFT4 308 aa5.06□□□□□ -1.6
CPNE3-208ENST00000614678 VGLL3A8MV65 326 aa5.06□□□□□ -1.6
CPNE3-208ENST00000614678 J3KTA2 159 aa5.06□□□□□ -1.6
CPNE3-208ENST00000614678 SYT5O00445 386 aa5.06□□□□□ -1.6
CPNE3-208ENST00000614678 KPNA4O00629 521 aaPredicted RBP5.06□□□□□ -1.6
CPNE3-208ENST00000614678 DVL2O14641 736 aa5.06□□□□□ -1.6
CPNE3-208ENST00000614678 ANGPT2O15123 496 aa5.06□□□□□ -1.6
CPNE3-208ENST00000614678 MFN2O95140 757 aa5.06□□□□□ -1.6
CPNE3-208ENST00000614678 CDH2P19022 906 aaPredicted RBP5.06□□□□□ -1.6
CPNE3-208ENST00000614678 SLC7A1P30825 629 aa5.06□□□□□ -1.6
CPNE3-208ENST00000614678 ERFP50548 548 aa5.06□□□□□ -1.6
CPNE3-208ENST00000614678 CRISP3P54108 245 aa5.06□□□□□ -1.6
CPNE3-208ENST00000614678 CEACAM7Q14002 265 aa5.06□□□□□ -1.6
CPNE3-208ENST00000614678 GCNT6Q5T4J0 391 aa5.06□□□□□ -1.6
CPNE3-208ENST00000614678 STAC2Q6ZMT1 411 aa5.06□□□□□ -1.6
CPNE3-208ENST00000614678 FCRLAQ7L513 359 aa5.06□□□□□ -1.6
CPNE3-208ENST00000614678 LINGO2Q7L985 606 aa5.06□□□□□ -1.6
CPNE3-208ENST00000614678 CHMP1BQ7LBR1 199 aa5.06□□□□□ -1.6
CPNE3-208ENST00000614678 VTCN1Q7Z7D3 282 aa5.06□□□□□ -1.6
CPNE3-208ENST00000614678 RNF128Q8TEB7 428 aa5.06□□□□□ -1.6
CPNE3-208ENST00000614678 ZBTB8AQ96BR9 441 aa5.06□□□□□ -1.6
CPNE3-208ENST00000614678 LURAP1Q96LR2 239 aa5.06□□□□□ -1.6
CPNE3-208ENST00000614678 MOGAT1Q96PD6 335 aa5.06□□□□□ -1.6
CPNE3-208ENST00000614678 CCDC134Q9H6E4 229 aa5.06□□□□□ -1.6
CPNE3-208ENST00000614678 PLEKHA6Q9Y2H5 1048 aa5.06□□□□□ -1.6
CPNE3-208ENST00000614678 PCDHGB3Q9Y5G1 929 aa5.06□□□□□ -1.6
CPNE3-208ENST00000614678 GPC6Q9Y625 555 aaPredicted RBP5.06□□□□□ -1.6
CPNE3-208ENST00000614678 V9GYQ6 96 aa5.06□□□□□ -1.6
CPNE3-208ENST00000614678 DSCAMO60469 2012 aa5.06□□□□□ -1.6
CPNE3-208ENST00000614678 CPSF4LA6NMK7 179 aaKnown RBP5.06□□□□□ -1.6
CPNE3-208ENST00000614678 HSPB2A8KAH6 182 aa5.06□□□□□ -1.6
CPNE3-208ENST00000614678 MRASO14807 208 aa5.06□□□□□ -1.6
CPNE3-208ENST00000614678 KRT75O95678 551 aa5.06□□□□□ -1.6
CPNE3-208ENST00000614678 TCN1P20061 433 aaPredicted RBP5.06□□□□□ -1.6
CPNE3-208ENST00000614678 AGAP20933 346 aa5.06□□□□□ -1.6
CPNE3-208ENST00000614678 ME2P23368 584 aa5.06□□□□□ -1.6
CPNE3-208ENST00000614678 RBMXP38159 391 aaKnown RBP5.06□□□□□ -1.6
CPNE3-208ENST00000614678 MRPL19P49406 292 aaKnown RBP5.06□□□□□ -1.6
CPNE3-208ENST00000614678 OR7A5Q15622 319 aa5.06□□□□□ -1.6
CPNE3-208ENST00000614678 HSPB2Q16082 182 aa5.06□□□□□ -1.6
CPNE3-208ENST00000614678 CYP51A1Q16850 503 aa5.06□□□□□ -1.6
CPNE3-208ENST00000614678 FAM214BQ7L5A3 538 aa5.06□□□□□ -1.6
CPNE3-208ENST00000614678 NATD1Q8N6N6 113 aa5.06□□□□□ -1.6
CPNE3-208ENST00000614678 SLC25A36Q96CQ1 311 aa5.06□□□□□ -1.6
CPNE3-208ENST00000614678 PTDSS2Q9BVG9 487 aa5.06□□□□□ -1.6
CPNE3-208ENST00000614678 A4GALTQ9NPC4 353 aa5.06□□□□□ -1.6
CPNE3-208ENST00000614678 KLHL14Q9P2G3 628 aa5.06□□□□□ -1.6
CPNE3-208ENST00000614678 LEF1Q9UJU2 399 aaPredicted RBP5.06□□□□□ -1.6
CPNE3-208ENST00000614678 TUBAL3A6NHL2 446 aa5.05□□□□□ -1.6
CPNE3-208ENST00000614678 H3BNH8 94 aa5.05□□□□□ -1.6
CPNE3-208ENST00000614678 SULT2B1O00204 365 aa5.05□□□□□ -1.6
CPNE3-208ENST00000614678 NME4O00746 187 aa5.05□□□□□ -1.6
CPNE3-208ENST00000614678 EIF4E2O60573 245 aaKnown RBP5.05□□□□□ -1.6
CPNE3-208ENST00000614678 CTAG2O75638 210 aa5.05□□□□□ -1.6
CPNE3-208ENST00000614678 SEC14L2O76054 403 aa5.05□□□□□ -1.6
CPNE3-208ENST00000614678 PLGP00747 810 aaPredicted RBP5.05□□□□□ -1.6
CPNE3-208ENST00000614678 BMP2P12643 396 aa5.05□□□□□ -1.6
CPNE3-208ENST00000614678 ZNF17P17021 662 aa5.05□□□□□ -1.6
CPNE3-208ENST00000614678 KIR2DL3P43628 341 aa5.05□□□□□ -1.6
CPNE3-208ENST00000614678 P2RY4P51582 365 aa5.05□□□□□ -1.6
CPNE3-208ENST00000614678 PCBP3P57721 371 aaKnown RBP5.05□□□□□ -1.6
CPNE3-208ENST00000614678 OTPQ5XKR4 325 aa5.05□□□□□ -1.6
CPNE3-208ENST00000614678 ESPNLQ6ZVH7 1005 aa5.05□□□□□ -1.6
CPNE3-208ENST00000614678 MTERF4Q7Z6M4 381 aaKnown RBP5.05□□□□□ -1.6
CPNE3-208ENST00000614678 GPAT4Q86UL3 456 aa5.05□□□□□ -1.6
CPNE3-208ENST00000614678 CXorf67Q86X51 503 aaPredicted RBP5.05□□□□□ -1.6
CPNE3-208ENST00000614678 PEX5LQ8IYB4 626 aa5.05□□□□□ -1.6
CPNE3-208ENST00000614678 ADAM19Q9H013 955 aa5.05□□□□□ -1.6
CPNE3-208ENST00000614678 MED4Q9NPJ6 270 aa5.05□□□□□ -1.6
CPNE3-208ENST00000614678 ACER3Q9NUN7 267 aa5.05□□□□□ -1.6
CPNE3-208ENST00000614678 ARL8BQ9NVJ2 186 aa5.05□□□□□ -1.6
CPNE3-208ENST00000614678 EGFL7Q9UHF1 273 aa5.05□□□□□ -1.6
CPNE3-208ENST00000614678 SH3GLB1Q9Y371 365 aa5.05□□□□□ -1.6
CPNE3-208ENST00000614678 AP4B1Q9Y6B7 739 aa5.05□□□□□ -1.6
CPNE3-208ENST00000614678 A0A1B0GWA3 101 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 114.6 ms