RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 SLC35B4Q969S0 331 aa11.01□□□□□ -0.65
CBWD3-208ENST00000612050 SH3GL1Q99961 368 aa11.01□□□□□ -0.65
CBWD3-208ENST00000612050 CCDC106Q9BWC9 280 aa11.01□□□□□ -0.65
CBWD3-208ENST00000612050 TAPBPLQ9BX59 468 aa11.01□□□□□ -0.65
CBWD3-208ENST00000612050 TMEM120AQ9BXJ8 343 aa11.01□□□□□ -0.65
CBWD3-208ENST00000612050 SRXN1Q9BYN0 137 aa11.01□□□□□ -0.65
CBWD3-208ENST00000612050 EVA1AQ9H8M9 152 aa11.01□□□□□ -0.65
CBWD3-208ENST00000612050 BCL2L10Q9HD36 194 aa11.01□□□□□ -0.65
CBWD3-208ENST00000612050 NGBQ9NPG2 151 aa11.01□□□□□ -0.65
CBWD3-208ENST00000612050 TMED7Q9Y3B3 224 aa11.01□□□□□ -0.65
CBWD3-208ENST00000612050 HEATR5AQ86XA9 2040 aa11.01□□□□□ -0.65
CBWD3-208ENST00000612050 DSPPQ9NZW4 1301 aa11.01□□□□□ -0.65
CBWD3-208ENST00000612050 CELSR2Q9HCU4 2923 aa11.01□□□□□ -0.65
CBWD3-208ENST00000612050 CLDN24A6NM45 220 aa11.01□□□□□ -0.65
CBWD3-208ENST00000612050 ATP8B1O43520 1251 aa11.01□□□□□ -0.65
CBWD3-208ENST00000612050 CGAP01215 116 aa11.01□□□□□ -0.65
CBWD3-208ENST00000612050 FESP07332 822 aa11.01□□□□□ -0.65
CBWD3-208ENST00000612050 BMP2P12643 396 aa11.01□□□□□ -0.65
CBWD3-208ENST00000612050 IL32P24001 234 aa11.01□□□□□ -0.65
CBWD3-208ENST00000612050 GTF2E2P29084 291 aaKnown RBP11.01□□□□□ -0.65
CBWD3-208ENST00000612050 SHC1P29353 583 aa11.01□□□□□ -0.65
CBWD3-208ENST00000612050 TACR3P29371 465 aa11.01□□□□□ -0.65
CBWD3-208ENST00000612050 MVDP53602 400 aa11.01□□□□□ -0.65
CBWD3-208ENST00000612050 OR2B6P58173 313 aa11.01□□□□□ -0.65
CBWD3-208ENST00000612050 CDK6Q00534 326 aa11.01□□□□□ -0.65
CBWD3-208ENST00000612050 GUSBP1Q15486 140 aa11.01□□□□□ -0.65
CBWD3-208ENST00000612050 CYP51A1Q16850 503 aa11.01□□□□□ -0.65
CBWD3-208ENST00000612050 ZNF474Q6S9Z5 364 aaPredicted RBP11.01□□□□□ -0.65
CBWD3-208ENST00000612050 ZNF836Q6ZNA1 936 aa11.01□□□□□ -0.65
CBWD3-208ENST00000612050 MTDHQ86UE4 582 aaKnown RBP11.01□□□□□ -0.65
CBWD3-208ENST00000612050 SLC30A8Q8IWU4 369 aa11.01□□□□□ -0.65
CBWD3-208ENST00000612050 TUSC5Q8IXB3 177 aa11.01□□□□□ -0.65
CBWD3-208ENST00000612050 ZNF100Q8IYN0 542 aa11.01□□□□□ -0.65
CBWD3-208ENST00000612050 STEAP2Q8NFT2 490 aa11.01□□□□□ -0.65
CBWD3-208ENST00000612050 KLHDC3Q9BQ90 382 aa11.01□□□□□ -0.65
CBWD3-208ENST00000612050 OR10A4Q9H209 315 aa11.01□□□□□ -0.65
CBWD3-208ENST00000612050 COQ10BQ9H8M1 238 aa11.01□□□□□ -0.65
CBWD3-208ENST00000612050 TMEM181Q9P2C4 612 aa11.01□□□□□ -0.65
CBWD3-208ENST00000612050 TRAPPC4Q9Y296 219 aa11.01□□□□□ -0.65
CBWD3-208ENST00000612050 GPR52Q9Y2T5 361 aa11.01□□□□□ -0.65
CBWD3-208ENST00000612050 TESMINQ9Y4I5 508 aa11.01□□□□□ -0.65
CBWD3-208ENST00000612050 IGHV3-15A0A0B4J1V0 119 aa11□□□□□ -0.65
CBWD3-208ENST00000612050 EFNA2O43921 213 aa11□□□□□ -0.65
CBWD3-208ENST00000612050 CYTIPO60759 359 aa11□□□□□ -0.65
CBWD3-208ENST00000612050 PGM3O95394 542 aa11□□□□□ -0.65
CBWD3-208ENST00000612050 GPIP06744 558 aa11□□□□□ -0.65
CBWD3-208ENST00000612050 IDUAP35475 653 aa11□□□□□ -0.65
CBWD3-208ENST00000612050 CYLC2Q14093 348 aaPredicted RBP11□□□□□ -0.65
CBWD3-208ENST00000612050 SCARB2Q14108 478 aa11□□□□□ -0.65
CBWD3-208ENST00000612050 KEAP1Q14145 624 aa11□□□□□ -0.65
CBWD3-208ENST00000612050 RPS26P11Q5JNZ5 115 aaPredicted RBP11□□□□□ -0.65
CBWD3-208ENST00000612050 PAGE3Q5JUK9 113 aa11□□□□□ -0.65
CBWD3-208ENST00000612050 SSX8Q7RTT4 187 aa11□□□□□ -0.65
CBWD3-208ENST00000612050 GALNT5Q7Z7M9 940 aa11□□□□□ -0.65
CBWD3-208ENST00000612050 CDC20BQ86Y33 519 aa11□□□□□ -0.65
CBWD3-208ENST00000612050 PCYOX1LQ8NBM8 494 aa11□□□□□ -0.65
CBWD3-208ENST00000612050 C11orf65Q8NCR3 313 aa11□□□□□ -0.65
CBWD3-208ENST00000612050 HIPK4Q8NE63 616 aa11□□□□□ -0.65
CBWD3-208ENST00000612050 NFKBIDQ8NI38 313 aa11□□□□□ -0.65
CBWD3-208ENST00000612050 SLC26A7Q8TE54 656 aa11□□□□□ -0.65
CBWD3-208ENST00000612050 TMEM38AQ9H6F2 299 aa11□□□□□ -0.65
CBWD3-208ENST00000612050 BCO1Q9HAY6 547 aa11□□□□□ -0.65
CBWD3-208ENST00000612050 FGFR1OP2Q9NVK5 253 aa11□□□□□ -0.65
CBWD3-208ENST00000612050 VAPAQ9P0L0 249 aa11□□□□□ -0.65
CBWD3-208ENST00000612050 NOSIPQ9Y314 301 aaKnown RBP11□□□□□ -0.65
CBWD3-208ENST00000612050 MAST4O15021 2626 aa11□□□□□ -0.65
CBWD3-208ENST00000612050 ZNF724A8MTY0 619 aa10.99□□□□□ -0.65
CBWD3-208ENST00000612050 BBIP1A8MTZ0 92 aa10.99□□□□□ -0.65
CBWD3-208ENST00000612050 AP3D1O14617 1153 aa10.99□□□□□ -0.65
CBWD3-208ENST00000612050 C1QCP02747 245 aa10.99□□□□□ -0.65
CBWD3-208ENST00000612050 GKN3PP0CG01 181 aa10.99□□□□□ -0.65
CBWD3-208ENST00000612050 ARAFP10398 606 aa10.99□□□□□ -0.65
CBWD3-208ENST00000612050 CD1EP15812 388 aa10.99□□□□□ -0.65
CBWD3-208ENST00000612050 GPX2P18283 190 aa10.99□□□□□ -0.65
CBWD3-208ENST00000612050 PRKAR1BP31321 381 aa10.99□□□□□ -0.65
CBWD3-208ENST00000612050 KRTAP10-9P60411 292 aa10.99□□□□□ -0.65
CBWD3-208ENST00000612050 RBBP4Q09028 425 aa10.99□□□□□ -0.65
CBWD3-208ENST00000612050 P2RY6Q15077 328 aa10.99□□□□□ -0.65
CBWD3-208ENST00000612050 INTS11Q5TA45 600 aaKnown RBP10.99□□□□□ -0.65
CBWD3-208ENST00000612050 ADGRG3Q86Y34 549 aa10.99□□□□□ -0.65
CBWD3-208ENST00000612050 UBE2J2Q8N2K1 259 aa10.99□□□□□ -0.65
CBWD3-208ENST00000612050 KISS1RQ969F8 398 aaPredicted RBP10.99□□□□□ -0.65
CBWD3-208ENST00000612050 MAL2Q969L2 176 aa10.99□□□□□ -0.65
CBWD3-208ENST00000612050 ZC3HAV1LQ96H79 300 aaKnown RBP10.99□□□□□ -0.65
CBWD3-208ENST00000612050 WFIKKN1Q96NZ8 548 aa10.99□□□□□ -0.65
CBWD3-208ENST00000612050 PSD2Q9BQI7 771 aa10.99□□□□□ -0.65
CBWD3-208ENST00000612050 RLIMQ9NVW2 624 aa10.99□□□□□ -0.65
CBWD3-208ENST00000612050 PARPBPQ9NWS1 579 aa10.99□□□□□ -0.65
CBWD3-208ENST00000612050 SLC25A37Q9NYZ2 338 aa10.99□□□□□ -0.65
CBWD3-208ENST00000612050 OSGIN1Q9UJX0 560 aa10.99□□□□□ -0.65
CBWD3-208ENST00000612050 GMEB1Q9Y692 573 aa10.99□□□□□ -0.65
CBWD3-208ENST00000612050 CENPEQ02224 2701 aa10.99□□□□□ -0.65
CBWD3-208ENST00000612050 ELOA3DA6NLF2 546 aaPredicted RBP10.98□□□□□ -0.65
CBWD3-208ENST00000612050 A8MVM7 634 aa10.98□□□□□ -0.65
CBWD3-208ENST00000612050 SMAD9O15198 467 aaKnown RBP10.98□□□□□ -0.65
CBWD3-208ENST00000612050 AHSA1O95433 338 aa10.98□□□□□ -0.65
CBWD3-208ENST00000612050 CNOT4O95628 575 aaKnown RBP10.98□□□□□ -0.65
CBWD3-208ENST00000612050 NPPAP01160 153 aa10.98□□□□□ -0.65
CBWD3-208ENST00000612050 PSMB1P20618 241 aaKnown RBP10.98□□□□□ -0.65
CBWD3-208ENST00000612050 CRYGSP22914 178 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms