RNA–Protein interactions for RNA: ENST00000610756.4

TCF3-219, Transcript of transcription factor 3, humanhuman

TSL 1 (best)

Gene TCF3, Length 1,343 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-219ENST00000610756 ACAA2P42765 397 aaKnown RBP17.18■□□□□ 0.34
TCF3-219ENST00000610756 RNF220Q5VTB9 566 aa17.18■□□□□ 0.34
TCF3-219ENST00000610756 STAC2Q6ZMT1 411 aa17.18■□□□□ 0.34
TCF3-219ENST00000610756 MTDHQ86UE4 582 aaKnown RBP17.18■□□□□ 0.34
TCF3-219ENST00000610756 PSD2Q9BQI7 771 aa17.18■□□□□ 0.34
TCF3-219ENST00000610756 MED18Q9BUE0 208 aa17.18■□□□□ 0.34
TCF3-219ENST00000610756 KLHL4Q9C0H6 718 aa17.18■□□□□ 0.34
TCF3-219ENST00000610756 LIME1Q9H400 295 aa17.18■□□□□ 0.34
TCF3-219ENST00000610756 ZNF385DQ9H6B1 395 aa17.18■□□□□ 0.34
TCF3-219ENST00000610756 ARMC7Q9H6L4 198 aa17.18■□□□□ 0.34
TCF3-219ENST00000610756 KLHL28Q9NXS3 571 aa17.18■□□□□ 0.34
TCF3-219ENST00000610756 VAPAQ9P0L0 249 aa17.18■□□□□ 0.34
TCF3-219ENST00000610756 OSGIN1Q9UJX0 560 aa17.18■□□□□ 0.34
TCF3-219ENST00000610756 TRAPPC4Q9Y296 219 aa17.18■□□□□ 0.34
TCF3-219ENST00000610756 TRBV5-3A0A0A0MS03 114 aa17.17■□□□□ 0.34
TCF3-219ENST00000610756 IGHV3-15A0A0B4J1V0 119 aa17.17■□□□□ 0.34
TCF3-219ENST00000610756 SMAD9O15198 467 aaKnown RBP17.17■□□□□ 0.34
TCF3-219ENST00000610756 ZNF208O43345 1280 aa17.17■□□□□ 0.34
TCF3-219ENST00000610756 PGM3O95394 542 aa17.17■□□□□ 0.34
TCF3-219ENST00000610756 PMS2P2O95744 297 aa17.17■□□□□ 0.34
TCF3-219ENST00000610756 PPP3CBP16298 524 aa17.17■□□□□ 0.34
TCF3-219ENST00000610756 GPX2P18283 190 aa17.17■□□□□ 0.34
TCF3-219ENST00000610756 POLR2HP52434 150 aaKnown RBP17.17■□□□□ 0.34
TCF3-219ENST00000610756 RASGEF1BQ0VAM2 473 aa17.17■□□□□ 0.34
TCF3-219ENST00000610756 DLEU7Q6UYE1 221 aa17.17■□□□□ 0.34
TCF3-219ENST00000610756 ZNF836Q6ZNA1 936 aa17.17■□□□□ 0.34
TCF3-219ENST00000610756 C22orf34Q6ZV56 151 aa17.17■□□□□ 0.34
TCF3-219ENST00000610756 NUFIP2Q7Z417 695 aaKnown RBP17.17■□□□□ 0.34
TCF3-219ENST00000610756 CLIP4Q8N3C7 705 aa17.17■□□□□ 0.34
TCF3-219ENST00000610756 TSPEARQ8WU66 669 aa17.17■□□□□ 0.34
TCF3-219ENST00000610756 MAL2Q969L2 176 aa17.17■□□□□ 0.34
TCF3-219ENST00000610756 ARL5BQ96KC2 179 aa17.17■□□□□ 0.34
TCF3-219ENST00000610756 SPATA9Q9BWV2 254 aa17.17■□□□□ 0.34
TCF3-219ENST00000610756 OR10A4Q9H209 315 aa17.17■□□□□ 0.34
TCF3-219ENST00000610756 C12orf49Q9H741 205 aa17.17■□□□□ 0.34
TCF3-219ENST00000610756 PLEKHF2Q9H8W4 249 aa17.17■□□□□ 0.34
TCF3-219ENST00000610756 ST6GALNAC2Q9UJ37 374 aa17.17■□□□□ 0.34
TCF3-219ENST00000610756 ZNF443Q9Y2A4 671 aaPredicted RBP17.17■□□□□ 0.34
TCF3-219ENST00000610756 GPR52Q9Y2T5 361 aa17.17■□□□□ 0.34
TCF3-219ENST00000610756 CHST2Q9Y4C5 530 aa17.17■□□□□ 0.34
TCF3-219ENST00000610756 ABCA4P78363 2273 aa17.17■□□□□ 0.34
TCF3-219ENST00000610756 HRNRQ86YZ3 2850 aaPredicted RBP17.16■□□□□ 0.34
TCF3-219ENST00000610756 TMED7-TICAM2A0A0A6YYA0 188 aa17.16■□□□□ 0.34
TCF3-219ENST00000610756 ZNF724A8MTY0 619 aa17.16■□□□□ 0.34
TCF3-219ENST00000610756 DNPH1O43598 174 aa17.16■□□□□ 0.34
TCF3-219ENST00000610756 ETS2P15036 469 aa17.16■□□□□ 0.34
TCF3-219ENST00000610756 CRYGSP22914 178 aa17.16■□□□□ 0.34
TCF3-219ENST00000610756 TACR3P29371 465 aa17.16■□□□□ 0.34
TCF3-219ENST00000610756 IST1P53990 364 aa17.16■□□□□ 0.34
TCF3-219ENST00000610756 PDK3Q15120 406 aa17.16■□□□□ 0.34
TCF3-219ENST00000610756 RPS26P11Q5JNZ5 115 aaPredicted RBP17.16■□□□□ 0.34
TCF3-219ENST00000610756 TFAP2EQ6VUC0 442 aa17.16■□□□□ 0.34
TCF3-219ENST00000610756 SPNS3Q6ZMD2 512 aa17.16■□□□□ 0.34
TCF3-219ENST00000610756 ZNF550Q7Z398 422 aa17.16■□□□□ 0.34
TCF3-219ENST00000610756 BBS10Q8TAM1 723 aa17.16■□□□□ 0.34
TCF3-219ENST00000610756 SLC35B4Q969S0 331 aa17.16■□□□□ 0.34
TCF3-219ENST00000610756 DDIT4LQ96D03 193 aa17.16■□□□□ 0.34
TCF3-219ENST00000610756 HDHD5Q9BXW7 423 aa17.16■□□□□ 0.34
TCF3-219ENST00000610756 CACYBPQ9HB71 228 aaKnown RBP17.16■□□□□ 0.34
TCF3-219ENST00000610756 CORO2BQ9UQ03 480 aa17.16■□□□□ 0.34
TCF3-219ENST00000610756 NDUFAF1Q9Y375 327 aa17.16■□□□□ 0.34
TCF3-219ENST00000610756 TMED7Q9Y3B3 224 aa17.16■□□□□ 0.34
TCF3-219ENST00000610756 A0A0G2JND7 137 aa17.15■□□□□ 0.34
TCF3-219ENST00000610756 EVPLLA8MZ36 301 aa17.15■□□□□ 0.34
TCF3-219ENST00000610756 C5orf58C9J3I9 102 aa17.15■□□□□ 0.34
TCF3-219ENST00000610756 FESP07332 822 aa17.15■□□□□ 0.34
TCF3-219ENST00000610756 GKN3PP0CG01 181 aa17.15■□□□□ 0.34
TCF3-219ENST00000610756 PSMB1P20618 241 aaKnown RBP17.15■□□□□ 0.34
TCF3-219ENST00000610756 ZNF311Q5JNZ3 666 aa17.15■□□□□ 0.34
TCF3-219ENST00000610756 ANKRD34AQ69YU3 496 aa17.15■□□□□ 0.34
TCF3-219ENST00000610756 GABRG1Q8N1C3 465 aa17.15■□□□□ 0.34
TCF3-219ENST00000610756 DPP10Q8N608 796 aa17.15■□□□□ 0.34
TCF3-219ENST00000610756 ZHX1-C8orf76Q96EF9 292 aa17.15■□□□□ 0.34
TCF3-219ENST00000610756 OR11A1Q9GZK7 315 aa17.15■□□□□ 0.34
TCF3-219ENST00000610756 TMEM38AQ9H6F2 299 aa17.15■□□□□ 0.34
TCF3-219ENST00000610756 TMEM181Q9P2C4 612 aa17.15■□□□□ 0.34
TCF3-219ENST00000610756 LEF1Q9UJU2 399 aaPredicted RBP17.15■□□□□ 0.34
TCF3-219ENST00000610756 IGKV3D-15A0A087WSY6 115 aa17.14■□□□□ 0.33
TCF3-219ENST00000610756 DEFB108AA8MXU0 73 aa17.14■□□□□ 0.33
TCF3-219ENST00000610756 GCM2O75603 506 aaPredicted RBP17.14■□□□□ 0.33
TCF3-219ENST00000610756 ARAFP10398 606 aa17.14■□□□□ 0.33
TCF3-219ENST00000610756 KLK2P20151 261 aa17.14■□□□□ 0.33
TCF3-219ENST00000610756 CCNA2P20248 432 aa17.14■□□□□ 0.33
TCF3-219ENST00000610756 COPZ1P61923 177 aa17.14■□□□□ 0.33
TCF3-219ENST00000610756 H3F3AP84243 136 aa17.14■□□□□ 0.33
TCF3-219ENST00000610756 RUNDC3AQ59EK9 446 aa17.14■□□□□ 0.33
TCF3-219ENST00000610756 GCNT6Q5T4J0 391 aa17.14■□□□□ 0.33
TCF3-219ENST00000610756 WBP2NLQ6ICG8 309 aa17.14■□□□□ 0.33
TCF3-219ENST00000610756 REEP3Q6NUK4 255 aa17.14■□□□□ 0.33
TCF3-219ENST00000610756 C10orf111Q8N326 155 aa17.14■□□□□ 0.33
TCF3-219ENST00000610756 IKZF5Q9H5V7 419 aa17.14■□□□□ 0.33
TCF3-219ENST00000610756 C6orf203Q9P0P8 240 aaPredicted RBP17.14■□□□□ 0.33
TCF3-219ENST00000610756 CELSR1Q9NYQ6 3014 aa17.14■□□□□ 0.33
TCF3-219ENST00000610756 AKAP6Q13023 2319 aa17.13■□□□□ 0.33
TCF3-219ENST00000610756 TMEM72A0PK05 275 aa17.13■□□□□ 0.33
TCF3-219ENST00000610756 ZNF814B7Z6K7 855 aa17.13■□□□□ 0.33
TCF3-219ENST00000610756 SIAH2O43255 324 aa17.13■□□□□ 0.33
TCF3-219ENST00000610756 EIF1BO60739 113 aaKnown RBP17.13■□□□□ 0.33
TCF3-219ENST00000610756 DNASE1P24855 282 aa17.13■□□□□ 0.33
TCF3-219ENST00000610756 CXCR1P25024 350 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms