RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 CDK5Q00535 292 aa6.37□□□□□ -1.39
SYNPO2-206ENST00000610556 TNFRSF17Q02223 184 aa6.37□□□□□ -1.39
SYNPO2-206ENST00000610556 EEF1A2Q05639 463 aaKnown RBP6.37□□□□□ -1.39
SYNPO2-206ENST00000610556 EFR3AQ14156 821 aa6.37□□□□□ -1.39
SYNPO2-206ENST00000610556 TMEM52BQ4KMG9 183 aa6.37□□□□□ -1.39
SYNPO2-206ENST00000610556 APOOLQ6UXV4 268 aa6.37□□□□□ -1.39
SYNPO2-206ENST00000610556 ANKRD33Q7Z3H0 272 aa6.37□□□□□ -1.39
SYNPO2-206ENST00000610556 GALNTL5Q7Z4T8 443 aa6.37□□□□□ -1.39
SYNPO2-206ENST00000610556 ZNF227Q86WZ6 799 aa6.37□□□□□ -1.39
SYNPO2-206ENST00000610556 NXPE2Q96DL1 559 aa6.37□□□□□ -1.39
SYNPO2-206ENST00000610556 ATF6BQ99941 703 aa6.37□□□□□ -1.39
SYNPO2-206ENST00000610556 ATG5Q9H1Y0 275 aa6.37□□□□□ -1.39
SYNPO2-206ENST00000610556 BCL2L10Q9HD36 194 aa6.37□□□□□ -1.39
SYNPO2-206ENST00000610556 WASH6PQ9NQA3 447 aa6.37□□□□□ -1.39
SYNPO2-206ENST00000610556 ASB6Q9NWX5 421 aa6.37□□□□□ -1.39
SYNPO2-206ENST00000610556 KLHL9Q9P2J3 617 aa6.37□□□□□ -1.39
SYNPO2-206ENST00000610556 SERGEFQ9UGK8 458 aa6.37□□□□□ -1.39
SYNPO2-206ENST00000610556 FBXL4Q9UKA2 621 aa6.37□□□□□ -1.39
SYNPO2-206ENST00000610556 ERVK-19Q9WJR5 959 aa6.37□□□□□ -1.39
SYNPO2-206ENST00000610556 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.37□□□□□ -1.39
SYNPO2-206ENST00000610556 ADAM18Q9Y3Q7 739 aa6.37□□□□□ -1.39
SYNPO2-206ENST00000610556 CABIN1Q9Y6J0 2220 aa6.37□□□□□ -1.39
SYNPO2-206ENST00000610556 OR2W5A6NFC9 320 aa6.36□□□□□ -1.39
SYNPO2-206ENST00000610556 SOX1O00570 391 aaPredicted RBP6.36□□□□□ -1.39
SYNPO2-206ENST00000610556 VEGFCP49767 419 aa6.36□□□□□ -1.39
SYNPO2-206ENST00000610556 GPR143P51810 404 aa6.36□□□□□ -1.39
SYNPO2-206ENST00000610556 MAT1AQ00266 395 aaKnown RBP6.36□□□□□ -1.39
SYNPO2-206ENST00000610556 POU4F2Q12837 409 aa6.36□□□□□ -1.39
SYNPO2-206ENST00000610556 SLC25A35Q3KQZ1 300 aa6.36□□□□□ -1.39
SYNPO2-206ENST00000610556 KIAA1211LQ6NV74 962 aa6.36□□□□□ -1.39
SYNPO2-206ENST00000610556 TMEM64Q6YI46 380 aa6.36□□□□□ -1.39
SYNPO2-206ENST00000610556 ZNF527Q8NB42 609 aa6.36□□□□□ -1.39
SYNPO2-206ENST00000610556 TOR1AIP2Q8NFQ8 470 aa6.36□□□□□ -1.39
SYNPO2-206ENST00000610556 SYNPRQ8TBG9 265 aa6.36□□□□□ -1.39
SYNPO2-206ENST00000610556 ZFAND1Q8TCF1 268 aa6.36□□□□□ -1.39
SYNPO2-206ENST00000610556 KIAA1143Q96AT1 154 aaPredicted RBP6.36□□□□□ -1.39
SYNPO2-206ENST00000610556 GPER1Q99527 375 aa6.36□□□□□ -1.39
SYNPO2-206ENST00000610556 TIMM29Q9BSF4 260 aa6.36□□□□□ -1.39
SYNPO2-206ENST00000610556 NIPAL2Q9H841 368 aa6.36□□□□□ -1.39
SYNPO2-206ENST00000610556 FGF20Q9NP95 211 aaPredicted RBP6.36□□□□□ -1.39
SYNPO2-206ENST00000610556 NOX4Q9NPH5 578 aa6.36□□□□□ -1.39
SYNPO2-206ENST00000610556 MED17Q9NVC6 651 aa6.36□□□□□ -1.39
SYNPO2-206ENST00000610556 PLEKHA6Q9Y2H5 1048 aa6.36□□□□□ -1.39
SYNPO2-206ENST00000610556 NOP16Q9Y3C1 178 aaKnown RBP6.36□□□□□ -1.39
SYNPO2-206ENST00000610556 PCYT1BQ9Y5K3 369 aaPredicted RBP6.36□□□□□ -1.39
SYNPO2-206ENST00000610556 A0A0G2JMZ2 1700 aa6.36□□□□□ -1.39
SYNPO2-206ENST00000610556 LRRC37A2A6NM11 1700 aa6.36□□□□□ -1.39
SYNPO2-206ENST00000610556 GREB1Q4ZG55 1949 aa6.36□□□□□ -1.39
SYNPO2-206ENST00000610556 ZNF236Q9UL36 1845 aa6.36□□□□□ -1.39
SYNPO2-206ENST00000610556 A0A0A6YYD5 115 aa6.36□□□□□ -1.39
SYNPO2-206ENST00000610556 A0A0A6YYJ9 748 aa6.36□□□□□ -1.39
SYNPO2-206ENST00000610556 TMEM72A0PK05 275 aa6.36□□□□□ -1.39
SYNPO2-206ENST00000610556 CDC42EP2O14613 210 aa6.36□□□□□ -1.39
SYNPO2-206ENST00000610556 PLA2G10O15496 165 aa6.36□□□□□ -1.39
SYNPO2-206ENST00000610556 DOK2O60496 412 aa6.36□□□□□ -1.39
SYNPO2-206ENST00000610556 ZNF780AO75290 641 aaPredicted RBP6.36□□□□□ -1.39
SYNPO2-206ENST00000610556 SCO1O75880 301 aa6.36□□□□□ -1.39
SYNPO2-206ENST00000610556 OR7A10O76100 309 aa6.36□□□□□ -1.39
SYNPO2-206ENST00000610556 C1QBP02746 253 aa6.36□□□□□ -1.39
SYNPO2-206ENST00000610556 LIPCP11150 499 aa6.36□□□□□ -1.39
SYNPO2-206ENST00000610556 RNH1P13489 461 aaKnown RBP6.36□□□□□ -1.39
SYNPO2-206ENST00000610556 OPRD1P41143 372 aa6.36□□□□□ -1.39
SYNPO2-206ENST00000610556 RPS27P42677 84 aaKnown RBP6.36□□□□□ -1.39
SYNPO2-206ENST00000610556 SIRPAP78324 504 aa6.36□□□□□ -1.39
SYNPO2-206ENST00000610556 GPLD1P80108 840 aa6.36□□□□□ -1.39
SYNPO2-206ENST00000610556 IFITM2Q01629 132 aa6.36□□□□□ -1.39
SYNPO2-206ENST00000610556 PCGF3Q3KNV8 242 aa6.36□□□□□ -1.39
SYNPO2-206ENST00000610556 CCDC157Q569K6 752 aa6.36□□□□□ -1.39
SYNPO2-206ENST00000610556 WDR45BQ5MNZ6 344 aa6.36□□□□□ -1.39
SYNPO2-206ENST00000610556 NIPAL3Q6P499 406 aa6.36□□□□□ -1.39
SYNPO2-206ENST00000610556 LRFN4Q6PJG9 635 aa6.36□□□□□ -1.39
SYNPO2-206ENST00000610556 LNX2Q8N448 690 aa6.36□□□□□ -1.39
SYNPO2-206ENST00000610556 THAP3Q8WTV1 239 aaPredicted RBP6.36□□□□□ -1.39
SYNPO2-206ENST00000610556 ZDHHC1Q8WTX9 485 aa6.36□□□□□ -1.39
SYNPO2-206ENST00000610556 ACTR6Q9GZN1 396 aa6.36□□□□□ -1.39
SYNPO2-206ENST00000610556 TRPV4Q9HBA0 871 aa6.36□□□□□ -1.39
SYNPO2-206ENST00000610556 SLC6A20Q9NP91 592 aa6.36□□□□□ -1.39
SYNPO2-206ENST00000610556 C20orf141Q9NUB4 165 aa6.36□□□□□ -1.39
SYNPO2-206ENST00000610556 COPZ2Q9P299 210 aa6.36□□□□□ -1.39
SYNPO2-206ENST00000610556 KCND3Q9UK17 655 aa6.36□□□□□ -1.39
SYNPO2-206ENST00000610556 FLVCR2Q9UPI3 526 aa6.36□□□□□ -1.39
SYNPO2-206ENST00000610556 CDC14CA4D256 554 aa6.36□□□□□ -1.39
SYNPO2-206ENST00000610556 C5orf51A6NDU8 294 aa6.36□□□□□ -1.39
SYNPO2-206ENST00000610556 TRABD2BA6NFA1 517 aa6.36□□□□□ -1.39
SYNPO2-206ENST00000610556 SCO2O43819 266 aa6.36□□□□□ -1.39
SYNPO2-206ENST00000610556 PAPLNO95428 1278 aa6.36□□□□□ -1.39
SYNPO2-206ENST00000610556 PROS1P07225 676 aa6.36□□□□□ -1.39
SYNPO2-206ENST00000610556 MSL3P1P0C860 447 aa6.36□□□□□ -1.39
SYNPO2-206ENST00000610556 UGT2B7P16662 529 aa6.36□□□□□ -1.39
SYNPO2-206ENST00000610556 RBMS1P29558 406 aaKnown RBP6.36□□□□□ -1.39
SYNPO2-206ENST00000610556 KLHL26Q53HC5 615 aa6.36□□□□□ -1.39
SYNPO2-206ENST00000610556 FAAP20Q6NZ36 180 aa6.36□□□□□ -1.39
SYNPO2-206ENST00000610556 ARMC10Q8N2F6 343 aa6.36□□□□□ -1.39
SYNPO2-206ENST00000610556 OR5J2Q8NH18 312 aa6.36□□□□□ -1.39
SYNPO2-206ENST00000610556 OR5AK2Q8NH90 309 aa6.36□□□□□ -1.39
SYNPO2-206ENST00000610556 OR1E3Q8WZA6 343 aa6.36□□□□□ -1.39
SYNPO2-206ENST00000610556 TRIM43Q96BQ3 446 aaPredicted RBP6.36□□□□□ -1.39
SYNPO2-206ENST00000610556 UPRTQ96BW1 309 aa6.36□□□□□ -1.39
SYNPO2-206ENST00000610556 RASD2Q96D21 266 aa6.36□□□□□ -1.39
SYNPO2-206ENST00000610556 WDR34Q96EX3 536 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms