RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 EPOPA6NHQ4 379 aa3.1□□□□□ -1.91
SMCHD1-213ENST00000609587 E7ENQ6 273 aa3.1□□□□□ -1.91
SMCHD1-213ENST00000609587 ZSCAN12O43309 604 aa3.1□□□□□ -1.91
SMCHD1-213ENST00000609587 ECI2O75521 394 aa3.1□□□□□ -1.91
SMCHD1-213ENST00000609587 OTCP00480 354 aa3.1□□□□□ -1.91
SMCHD1-213ENST00000609587 ANXA8P13928 327 aa3.1□□□□□ -1.91
SMCHD1-213ENST00000609587 CCDC130P13994 396 aa3.1□□□□□ -1.91
SMCHD1-213ENST00000609587 TPSB2P20231 275 aa3.1□□□□□ -1.91
SMCHD1-213ENST00000609587 NT5EP21589 574 aa3.1□□□□□ -1.91
SMCHD1-213ENST00000609587 VDAC1P21796 283 aa3.1□□□□□ -1.91
SMCHD1-213ENST00000609587 OTX2P32243 289 aa3.1□□□□□ -1.91
SMCHD1-213ENST00000609587 BMI1P35226 326 aa3.1□□□□□ -1.91
SMCHD1-213ENST00000609587 EIF3EP60228 445 aaKnown RBP3.1□□□□□ -1.91
SMCHD1-213ENST00000609587 RPS8P62241 208 aaKnown RBP3.1□□□□□ -1.91
SMCHD1-213ENST00000609587 OC90Q02509 493 aaPredicted RBP3.1□□□□□ -1.91
SMCHD1-213ENST00000609587 CCDC173Q0VFZ6 552 aa3.1□□□□□ -1.91
SMCHD1-213ENST00000609587 RAB40BQ12829 278 aa3.1□□□□□ -1.91
SMCHD1-213ENST00000609587 SNTB2Q13425 540 aaKnown RBP3.1□□□□□ -1.91
SMCHD1-213ENST00000609587 TPSAB1Q15661 275 aa3.1□□□□□ -1.91
SMCHD1-213ENST00000609587 AANATQ16613 207 aa3.1□□□□□ -1.91
SMCHD1-213ENST00000609587 ISXQ2M1V0 245 aa3.1□□□□□ -1.91
SMCHD1-213ENST00000609587 TIGITQ495A1 244 aa3.1□□□□□ -1.91
SMCHD1-213ENST00000609587 NADK2Q4G0N4 442 aa3.1□□□□□ -1.91
SMCHD1-213ENST00000609587 LIN9Q5TKA1 542 aa3.1□□□□□ -1.91
SMCHD1-213ENST00000609587 ANXA8L1Q5VT79 327 aa3.1□□□□□ -1.91
SMCHD1-213ENST00000609587 TFAP2EQ6VUC0 442 aa3.1□□□□□ -1.91
SMCHD1-213ENST00000609587 FRA10AC1Q70Z53 315 aa3.1□□□□□ -1.91
SMCHD1-213ENST00000609587 ZDHHC21Q8IVQ6 265 aa3.1□□□□□ -1.91
SMCHD1-213ENST00000609587 C15orf54Q8N8G6 183 aa3.1□□□□□ -1.91
SMCHD1-213ENST00000609587 ZNF321PQ8N8H1 164 aa3.1□□□□□ -1.91
SMCHD1-213ENST00000609587 FAM184AQ8NB25 1140 aa3.1□□□□□ -1.91
SMCHD1-213ENST00000609587 OR2A12Q8NGT7 310 aa3.1□□□□□ -1.91
SMCHD1-213ENST00000609587 OR9A1PQ8NGU1 263 aa3.1□□□□□ -1.91
SMCHD1-213ENST00000609587 FAM122AQ96E09 287 aa3.1□□□□□ -1.91
SMCHD1-213ENST00000609587 PSKH2Q96QS6 385 aa3.1□□□□□ -1.91
SMCHD1-213ENST00000609587 YTHDF1Q9BYJ9 559 aaKnown RBP3.1□□□□□ -1.91
SMCHD1-213ENST00000609587 HAUS4Q9H6D7 363 aa3.1□□□□□ -1.91
SMCHD1-213ENST00000609587 ZNF702PQ9H963 129 aa3.1□□□□□ -1.91
SMCHD1-213ENST00000609587 RAB20Q9NX57 234 aa3.1□□□□□ -1.91
SMCHD1-213ENST00000609587 OR1A1Q9P1Q5 309 aa3.1□□□□□ -1.91
SMCHD1-213ENST00000609587 WRAP73Q9P2S5 460 aaPredicted RBP3.1□□□□□ -1.91
SMCHD1-213ENST00000609587 GNG12Q9UBI6 72 aa3.1□□□□□ -1.91
SMCHD1-213ENST00000609587 RIMS3Q9UJD0 308 aa3.1□□□□□ -1.91
SMCHD1-213ENST00000609587 MAD1L1Q9Y6D9 718 aa3.1□□□□□ -1.91
SMCHD1-213ENST00000609587 KIF25-AS1Q9Y6Z4 181 aa3.1□□□□□ -1.91
SMCHD1-213ENST00000609587 COMMD3-BMI1R4GMX3 469 aa3.1□□□□□ -1.91
SMCHD1-213ENST00000609587 LOC100131303A0A0U1RQF7 123 aa3.09□□□□□ -1.91
SMCHD1-213ENST00000609587 SMIM28A0A1B0GU29 152 aa3.09□□□□□ -1.91
SMCHD1-213ENST00000609587 HSBP1L1C9JCN9 74 aa3.09□□□□□ -1.91
SMCHD1-213ENST00000609587 H0Y8G0 127 aa3.09□□□□□ -1.91
SMCHD1-213ENST00000609587 MSH4O15457 936 aa3.09□□□□□ -1.91
SMCHD1-213ENST00000609587 TBX19O60806 448 aa3.09□□□□□ -1.91
SMCHD1-213ENST00000609587 TBL1XO60907 577 aa3.09□□□□□ -1.91
SMCHD1-213ENST00000609587 BCAS1O75363 584 aaPredicted RBP3.09□□□□□ -1.91
SMCHD1-213ENST00000609587 SURF6O75683 361 aaKnown RBP3.09□□□□□ -1.91
SMCHD1-213ENST00000609587 IGHV3-23P01764 117 aa3.09□□□□□ -1.91
SMCHD1-213ENST00000609587 GCFC2P16383 781 aaKnown RBP3.09□□□□□ -1.91
SMCHD1-213ENST00000609587 PGCP20142 388 aa3.09□□□□□ -1.91
SMCHD1-213ENST00000609587 PSMB1P20618 241 aaKnown RBP3.09□□□□□ -1.91
SMCHD1-213ENST00000609587 CALB2P22676 271 aa3.09□□□□□ -1.91
SMCHD1-213ENST00000609587 HOXA6P31267 233 aa3.09□□□□□ -1.91
SMCHD1-213ENST00000609587 EPHX2P34913 555 aa3.09□□□□□ -1.91
SMCHD1-213ENST00000609587 CA8P35219 290 aa3.09□□□□□ -1.91
SMCHD1-213ENST00000609587 GCKP35557 465 aa3.09□□□□□ -1.91
SMCHD1-213ENST00000609587 RGRP47804 291 aa3.09□□□□□ -1.91
SMCHD1-213ENST00000609587 SLC26A2P50443 739 aa3.09□□□□□ -1.91
SMCHD1-213ENST00000609587 DIO3P55073 304 aa3.09□□□□□ -1.91
SMCHD1-213ENST00000609587 TNFRSF17Q02223 184 aa3.09□□□□□ -1.91
SMCHD1-213ENST00000609587 CSTF1Q05048 431 aaKnown RBP3.09□□□□□ -1.91
SMCHD1-213ENST00000609587 MAB21L1Q13394 359 aa3.09□□□□□ -1.91
SMCHD1-213ENST00000609587 PDK4Q16654 411 aa3.09□□□□□ -1.91
SMCHD1-213ENST00000609587 SLC5A12Q1EHB4 618 aa3.09□□□□□ -1.91
SMCHD1-213ENST00000609587 KCTD21Q4G0X4 260 aa3.09□□□□□ -1.91
SMCHD1-213ENST00000609587 NKAIN1Q4KMZ8 207 aa3.09□□□□□ -1.91
SMCHD1-213ENST00000609587 C9orf129Q5T035 196 aaKnown RBP3.09□□□□□ -1.91
SMCHD1-213ENST00000609587 ATAD3BQ5T9A4 648 aa3.09□□□□□ -1.91
SMCHD1-213ENST00000609587 WSCD1Q658N2 575 aa3.09□□□□□ -1.91
SMCHD1-213ENST00000609587 CXCL17Q6UXB2 119 aa3.09□□□□□ -1.91
SMCHD1-213ENST00000609587 TRPM8Q7Z2W7 1104 aa3.09□□□□□ -1.91
SMCHD1-213ENST00000609587 C16orf62Q7Z3J2 963 aa3.09□□□□□ -1.91
SMCHD1-213ENST00000609587 ACOT1Q86TX2 421 aa3.09□□□□□ -1.91
SMCHD1-213ENST00000609587 BIVMQ86UB2 503 aa3.09□□□□□ -1.91
SMCHD1-213ENST00000609587 SLC22A9Q8IVM8 553 aa3.09□□□□□ -1.91
SMCHD1-213ENST00000609587 C11orf53Q8IXP5 236 aa3.09□□□□□ -1.91
SMCHD1-213ENST00000609587 TTC5Q8N0Z6 440 aa3.09□□□□□ -1.91
SMCHD1-213ENST00000609587 OR2T3Q8NH03 318 aa3.09□□□□□ -1.91
SMCHD1-213ENST00000609587 FGGYQ96C11 551 aa3.09□□□□□ -1.91
SMCHD1-213ENST00000609587 HAVCR1Q96D42 359 aa3.09□□□□□ -1.91
SMCHD1-213ENST00000609587 TPD52L3Q96J77 140 aa3.09□□□□□ -1.91
SMCHD1-213ENST00000609587 MAGEB18Q96M61 343 aa3.09□□□□□ -1.91
SMCHD1-213ENST00000609587 C12orf66Q96MD2 445 aa3.09□□□□□ -1.91
SMCHD1-213ENST00000609587 TTC25Q96NG3 672 aa3.09□□□□□ -1.91
SMCHD1-213ENST00000609587 CYP2S1Q96SQ9 504 aa3.09□□□□□ -1.91
SMCHD1-213ENST00000609587 CITED1Q99966 193 aa3.09□□□□□ -1.91
SMCHD1-213ENST00000609587 ALG12Q9BV10 488 aa3.09□□□□□ -1.91
SMCHD1-213ENST00000609587 TMEM117Q9H0C3 514 aa3.09□□□□□ -1.91
SMCHD1-213ENST00000609587 TDRD3Q9H7E2 651 aaKnown RBP3.09□□□□□ -1.91
SMCHD1-213ENST00000609587 NANSQ9NR45 359 aa3.09□□□□□ -1.91
SMCHD1-213ENST00000609587 CHMP5Q9NZZ3 219 aa3.09□□□□□ -1.91
SMCHD1-213ENST00000609587 WDR45Q9Y484 360 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms