RNA–Protein interactions for RNA: ENST00000601319.1

HERC3-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-214ENST00000601319 VRK2Q86Y07 508 aa15.32■□□□□ 0.04
HERC3-214ENST00000601319 DPP10Q8N608 796 aa15.32■□□□□ 0.04
HERC3-214ENST00000601319 SLC35B4Q969S0 331 aa15.32■□□□□ 0.04
HERC3-214ENST00000601319 SPATA9Q9BWV2 254 aa15.32■□□□□ 0.04
HERC3-214ENST00000601319 ARMC7Q9H6L4 198 aa15.32■□□□□ 0.04
HERC3-214ENST00000601319 KLHL9Q9P2J3 617 aa15.32■□□□□ 0.04
HERC3-214ENST00000601319 LEF1Q9UJU2 399 aaPredicted RBP15.32■□□□□ 0.04
HERC3-214ENST00000601319 IFT52Q9Y366 437 aa15.32■□□□□ 0.04
HERC3-214ENST00000601319 AKAP6Q13023 2319 aa15.32■□□□□ 0.04
HERC3-214ENST00000601319 PGM3O95394 542 aa15.31■□□□□ 0.04
HERC3-214ENST00000601319 TROVE2P10155 538 aaKnown RBP eCLIP15.31■□□□□ 0.04
HERC3-214ENST00000601319 ARAFP10398 606 aa15.31■□□□□ 0.04
HERC3-214ENST00000601319 ETS2P15036 469 aa15.31■□□□□ 0.04
HERC3-214ENST00000601319 GPX2P18283 190 aa15.31■□□□□ 0.04
HERC3-214ENST00000601319 KCNJ5P48544 419 aa15.31■□□□□ 0.04
HERC3-214ENST00000601319 HSP90B2PQ58FF3 399 aa15.31■□□□□ 0.04
HERC3-214ENST00000601319 GCNT6Q5T4J0 391 aa15.31■□□□□ 0.04
HERC3-214ENST00000601319 ABLIM2Q6H8Q1 611 aa15.31■□□□□ 0.04
HERC3-214ENST00000601319 DLEU7Q6UYE1 221 aa15.31■□□□□ 0.04
HERC3-214ENST00000601319 ZNF550Q7Z398 422 aa15.31■□□□□ 0.04
HERC3-214ENST00000601319 CDC20BQ86Y33 519 aa15.31■□□□□ 0.04
HERC3-214ENST00000601319 ADGRG3Q86Y34 549 aa15.31■□□□□ 0.04
HERC3-214ENST00000601319 NINJ1Q92982 152 aa15.31■□□□□ 0.04
HERC3-214ENST00000601319 MAL2Q969L2 176 aa15.31■□□□□ 0.04
HERC3-214ENST00000601319 PSD2Q9BQI7 771 aa15.31■□□□□ 0.04
HERC3-214ENST00000601319 CPPED1Q9BRF8 314 aaPredicted RBP15.31■□□□□ 0.04
HERC3-214ENST00000601319 OR10A4Q9H209 315 aa15.31■□□□□ 0.04
HERC3-214ENST00000601319 IKZF5Q9H5V7 419 aa15.31■□□□□ 0.04
HERC3-214ENST00000601319 CCDC134Q9H6E4 229 aa15.31■□□□□ 0.04
HERC3-214ENST00000601319 TMEM38AQ9H6F2 299 aa15.31■□□□□ 0.04
HERC3-214ENST00000601319 RLIMQ9NVW2 624 aa15.31■□□□□ 0.04
HERC3-214ENST00000601319 OSGIN1Q9UJX0 560 aa15.31■□□□□ 0.04
HERC3-214ENST00000601319 ING1Q9UK53 422 aaPredicted RBP15.31■□□□□ 0.04
HERC3-214ENST00000601319 ZNF232Q9UNY5 417 aa15.31■□□□□ 0.04
HERC3-214ENST00000601319 RAI1Q7Z5J4 1906 aaPredicted RBP15.31■□□□□ 0.04
HERC3-214ENST00000601319 HIVEP1P15822 2718 aa15.3■□□□□ 0.04
HERC3-214ENST00000601319 TMED7-TICAM2A0A0A6YYA0 188 aa15.3■□□□□ 0.04
HERC3-214ENST00000601319 C5orf58C9J3I9 102 aa15.3■□□□□ 0.04
HERC3-214ENST00000601319 SULT2B1O00204 365 aa15.3■□□□□ 0.04
HERC3-214ENST00000601319 HRGP04196 525 aa15.3■□□□□ 0.04
HERC3-214ENST00000601319 FESP07332 822 aa15.3■□□□□ 0.04
HERC3-214ENST00000601319 YES1P07947 543 aa15.3■□□□□ 0.04
HERC3-214ENST00000601319 CD1EP15812 388 aa15.3■□□□□ 0.04
HERC3-214ENST00000601319 PPP3CBP16298 524 aa15.3■□□□□ 0.04
HERC3-214ENST00000601319 TACR3P29371 465 aa15.3■□□□□ 0.04
HERC3-214ENST00000601319 ACAA2P42765 397 aaKnown RBP15.3■□□□□ 0.04
HERC3-214ENST00000601319 PDK3Q15120 406 aa15.3■□□□□ 0.04
HERC3-214ENST00000601319 TFAP2EQ6VUC0 442 aa15.3■□□□□ 0.04
HERC3-214ENST00000601319 TUSC5Q8IXB3 177 aa15.3■□□□□ 0.04
HERC3-214ENST00000601319 C10orf111Q8N326 155 aa15.3■□□□□ 0.04
HERC3-214ENST00000601319 ZHX1-C8orf76Q96EF9 292 aa15.3■□□□□ 0.04
HERC3-214ENST00000601319 MED18Q9BUE0 208 aa15.3■□□□□ 0.04
HERC3-214ENST00000601319 TMEM120AQ9BXJ8 343 aa15.3■□□□□ 0.04
HERC3-214ENST00000601319 ADAM19Q9H013 955 aa15.3■□□□□ 0.04
HERC3-214ENST00000601319 ZNF226Q9NYT6 803 aa15.3■□□□□ 0.04
HERC3-214ENST00000601319 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.3■□□□□ 0.04
HERC3-214ENST00000601319 TRAPPC4Q9Y296 219 aa15.3■□□□□ 0.04
HERC3-214ENST00000601319 NDUFAF1Q9Y375 327 aa15.3■□□□□ 0.04
HERC3-214ENST00000601319 TMED7Q9Y3B3 224 aa15.3■□□□□ 0.04
HERC3-214ENST00000601319 CHST2Q9Y4C5 530 aa15.3■□□□□ 0.04
HERC3-214ENST00000601319 IGKV3D-15A0A087WSY6 115 aa15.29■□□□□ 0.04
HERC3-214ENST00000601319 IGHV3-15A0A0B4J1V0 119 aa15.29■□□□□ 0.04
HERC3-214ENST00000601319 ZNF724A8MTY0 619 aa15.29■□□□□ 0.04
HERC3-214ENST00000601319 EVPLLA8MZ36 301 aa15.29■□□□□ 0.04
HERC3-214ENST00000601319 CASKO14936 926 aa15.29■□□□□ 0.04
HERC3-214ENST00000601319 ANGPT2O15123 496 aa15.29■□□□□ 0.04
HERC3-214ENST00000601319 TFPIP10646 304 aa15.29■□□□□ 0.04
HERC3-214ENST00000601319 PSMB1P20618 241 aaKnown RBP15.29■□□□□ 0.04
HERC3-214ENST00000601319 CRYGSP22914 178 aa15.29■□□□□ 0.04
HERC3-214ENST00000601319 PRKAR1BP31321 381 aa15.29■□□□□ 0.04
HERC3-214ENST00000601319 DNAJA1P31689 397 aaKnown RBP15.29■□□□□ 0.04
HERC3-214ENST00000601319 RASGEF1BQ0VAM2 473 aa15.29■□□□□ 0.04
HERC3-214ENST00000601319 EXOC3L2Q2M3D2 409 aa15.29■□□□□ 0.04
HERC3-214ENST00000601319 ZNF311Q5JNZ3 666 aa15.29■□□□□ 0.04
HERC3-214ENST00000601319 REEP3Q6NUK4 255 aa15.29■□□□□ 0.04
HERC3-214ENST00000601319 STAC2Q6ZMT1 411 aa15.29■□□□□ 0.04
HERC3-214ENST00000601319 DHDDSQ86SQ9 333 aa15.29■□□□□ 0.04
HERC3-214ENST00000601319 MTDHQ86UE4 582 aaKnown RBP15.29■□□□□ 0.04
HERC3-214ENST00000601319 CLIP4Q8N3C7 705 aa15.29■□□□□ 0.04
HERC3-214ENST00000601319 DDIT4LQ96D03 193 aa15.29■□□□□ 0.04
HERC3-214ENST00000601319 ARL5BQ96KC2 179 aa15.29■□□□□ 0.04
HERC3-214ENST00000601319 WFIKKN1Q96NZ8 548 aa15.29■□□□□ 0.04
HERC3-214ENST00000601319 C12orf49Q9H741 205 aa15.29■□□□□ 0.04
HERC3-214ENST00000601319 FGFR1OP2Q9NVK5 253 aa15.29■□□□□ 0.04
HERC3-214ENST00000601319 KLHL28Q9NXS3 571 aa15.29■□□□□ 0.04
HERC3-214ENST00000601319 EDARQ9UNE0 448 aa15.29■□□□□ 0.04
HERC3-214ENST00000601319 ITPR3Q14573 2671 aa15.29■□□□□ 0.04
HERC3-214ENST00000601319 KLK2P20151 261 aa15.28■□□□□ 0.04
HERC3-214ENST00000601319 SLC16A1P53985 500 aa15.28■□□□□ 0.04
HERC3-214ENST00000601319 COPZ1P61923 177 aa15.28■□□□□ 0.04
HERC3-214ENST00000601319 CDK6Q00534 326 aa15.28■□□□□ 0.04
HERC3-214ENST00000601319 TESK1Q15569 626 aa15.28■□□□□ 0.04
HERC3-214ENST00000601319 RUNDC3AQ59EK9 446 aa15.28■□□□□ 0.04
HERC3-214ENST00000601319 WBP2NLQ6ICG8 309 aa15.28■□□□□ 0.04
HERC3-214ENST00000601319 CGB2Q6NT52 195 aa15.28■□□□□ 0.04
HERC3-214ENST00000601319 NUFIP2Q7Z417 695 aaKnown RBP15.28■□□□□ 0.04
HERC3-214ENST00000601319 RETREG3Q86VR2 466 aa15.28■□□□□ 0.04
HERC3-214ENST00000601319 KRT73Q86Y46 540 aa15.28■□□□□ 0.04
HERC3-214ENST00000601319 GABRG1Q8N1C3 465 aa15.28■□□□□ 0.04
HERC3-214ENST00000601319 NFKBIDQ8NI38 313 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms