RNA–Protein interactions for RNA: ENST00000600910.5

PNKP-215, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,600 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-215ENST00000600910 LDAHQ9H6V9 325 aa18.48■□□□□ 0.55
PNKP-215ENST00000600910 SERINC1Q9NRX5 453 aa18.48■□□□□ 0.55
PNKP-215ENST00000600910 ZNF337Q9Y3M9 751 aa18.48■□□□□ 0.55
PNKP-215ENST00000600910 SAMHD1Q9Y3Z3 626 aaKnown RBP18.48■□□□□ 0.55
PNKP-215ENST00000600910 TRGV5A0A0B4J1U4 118 aa18.47■□□□□ 0.55
PNKP-215ENST00000600910 TRBV4-1A0A0J9YWV2 114 aa18.47■□□□□ 0.55
PNKP-215ENST00000600910 TMEM72A0PK05 275 aa18.47■□□□□ 0.55
PNKP-215ENST00000600910 H3BML4 177 aa18.47■□□□□ 0.55
PNKP-215ENST00000600910 TNFRSF11BO00300 401 aa18.47■□□□□ 0.55
PNKP-215ENST00000600910 IGHG3P01860 377 aa18.47■□□□□ 0.55
PNKP-215ENST00000600910 PEPDP12955 493 aa18.47■□□□□ 0.55
PNKP-215ENST00000600910 SELENBP1Q13228 472 aa18.47■□□□□ 0.55
PNKP-215ENST00000600910 C3orf33Q6P1S2 294 aa18.47■□□□□ 0.55
PNKP-215ENST00000600910 ATP6V1C2Q8NEY4 427 aa18.47■□□□□ 0.55
PNKP-215ENST00000600910 NEIL3Q8TAT5 605 aa18.47■□□□□ 0.55
PNKP-215ENST00000600910 SLC7A13Q8TCU3 470 aa18.47■□□□□ 0.55
PNKP-215ENST00000600910 SEMA6AQ9H2E6 1030 aa18.47■□□□□ 0.55
PNKP-215ENST00000600910 EXO5Q9H790 373 aa18.47■□□□□ 0.55
PNKP-215ENST00000600910 TMEM185BQ9H7F4 350 aa18.47■□□□□ 0.55
PNKP-215ENST00000600910 NTN4Q9HB63 628 aa18.47■□□□□ 0.55
PNKP-215ENST00000600910 BAG2O95816 211 aa18.46■□□□□ 0.55
PNKP-215ENST00000600910 CHMP24386 653 aa18.46■□□□□ 0.55
PNKP-215ENST00000600910 HMGA2P52926 109 aa18.46■□□□□ 0.55
PNKP-215ENST00000600910 IST1P53990 364 aa18.46■□□□□ 0.55
PNKP-215ENST00000600910 EXOC3L2Q2M3D2 409 aa18.46■□□□□ 0.55
PNKP-215ENST00000600910 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.46■□□□□ 0.55
PNKP-215ENST00000600910 TRILQ7L0X0 811 aa18.46■□□□□ 0.55
PNKP-215ENST00000600910 RELTQ969Z4 430 aa18.46■□□□□ 0.55
PNKP-215ENST00000600910 SNRNP40Q96DI7 357 aaKnown RBP18.46■□□□□ 0.55
PNKP-215ENST00000600910 BDH2Q9BUT1 245 aa18.46■□□□□ 0.55
PNKP-215ENST00000600910 ZNF426Q9BUY5 554 aa18.46■□□□□ 0.55
PNKP-215ENST00000600910 IGKV1D-42A0A075B6H8 117 aa18.45■□□□□ 0.54
PNKP-215ENST00000600910 ATXN7O15265 892 aaPredicted RBP18.45■□□□□ 0.54
PNKP-215ENST00000600910 LIMS1P48059 325 aa18.45■□□□□ 0.54
PNKP-215ENST00000600910 NFATC3Q12968 1075 aa18.45■□□□□ 0.54
PNKP-215ENST00000600910 PRR30Q53SZ7 412 aaPredicted RBP18.45■□□□□ 0.54
PNKP-215ENST00000600910 DCST1Q5T197 706 aa18.45■□□□□ 0.54
PNKP-215ENST00000600910 ZNF324BQ6AW86 544 aaPredicted RBP18.45■□□□□ 0.54
PNKP-215ENST00000600910 PODNL1Q6PEZ8 512 aa18.45■□□□□ 0.54
PNKP-215ENST00000600910 TTC33Q6PID6 262 aaPredicted RBP18.45■□□□□ 0.54
PNKP-215ENST00000600910 P3H2Q8IVL5 708 aa18.45■□□□□ 0.54
PNKP-215ENST00000600910 PQLC1Q8N2U9 271 aa18.45■□□□□ 0.54
PNKP-215ENST00000600910 OR4C15Q8NGM1 316 aa18.45■□□□□ 0.54
PNKP-215ENST00000600910 FAR1Q8WVX9 515 aa18.45■□□□□ 0.54
PNKP-215ENST00000600910 TMEM239Q8WW34 195 aa18.45■□□□□ 0.54
PNKP-215ENST00000600910 ACOT11Q8WXI4 607 aaPredicted RBP18.45■□□□□ 0.54
PNKP-215ENST00000600910 ALPK1Q96QP1 1244 aa18.45■□□□□ 0.54
PNKP-215ENST00000600910 EPYCQ99645 322 aa18.45■□□□□ 0.54
PNKP-215ENST00000600910 FUZQ9BT04 418 aa18.45■□□□□ 0.54
PNKP-215ENST00000600910 DCLRE1BQ9H816 532 aa18.45■□□□□ 0.54
PNKP-215ENST00000600910 MED12Q93074 2177 aa18.45■□□□□ 0.54
PNKP-215ENST00000600910 A0A087WUU8 490 aa18.45■□□□□ 0.54
PNKP-215ENST00000600910 ZC3H12DA2A288 527 aaKnown RBP18.45■□□□□ 0.54
PNKP-215ENST00000600910 LINC01387J3KSC0 135 aa18.45■□□□□ 0.54
PNKP-215ENST00000600910 MGRN1O60291 552 aa18.45■□□□□ 0.54
PNKP-215ENST00000600910 HCN1O60741 890 aa18.45■□□□□ 0.54
PNKP-215ENST00000600910 E2F6O75461 281 aa18.45■□□□□ 0.54
PNKP-215ENST00000600910 OPN1LWP04000 364 aa18.45■□□□□ 0.54
PNKP-215ENST00000600910 ANPEPP15144 967 aa18.45■□□□□ 0.54
PNKP-215ENST00000600910 GCKP35557 465 aa18.45■□□□□ 0.54
PNKP-215ENST00000600910 RBM34P42696 430 aaKnown RBP18.45■□□□□ 0.54
PNKP-215ENST00000600910 STARP49675 285 aa18.45■□□□□ 0.54
PNKP-215ENST00000600910 MAP2K6P52564 334 aa18.45■□□□□ 0.54
PNKP-215ENST00000600910 UGT2B15P54855 530 aa18.45■□□□□ 0.54
PNKP-215ENST00000600910 RAC1P63000 192 aa18.45■□□□□ 0.54
PNKP-215ENST00000600910 LSM11P83369 360 aaKnown RBP eCLIP18.45■□□□□ 0.541e-11■■■■■ 50.1
PNKP-215ENST00000600910 EGR4Q05215 589 aa18.45■□□□□ 0.54
PNKP-215ENST00000600910 SEC23BQ15437 767 aa18.45■□□□□ 0.54
PNKP-215ENST00000600910 TBPL2Q6SJ96 375 aa18.45■□□□□ 0.54
PNKP-215ENST00000600910 TMEM179BQ7Z7N9 219 aa18.45■□□□□ 0.54
PNKP-215ENST00000600910 SMPDL3BQ92485 455 aa18.45■□□□□ 0.54
PNKP-215ENST00000600910 CENPNQ96H22 339 aaPredicted RBP18.45■□□□□ 0.54
PNKP-215ENST00000600910 HS6ST2Q96MM7 605 aa18.45■□□□□ 0.54
PNKP-215ENST00000600910 OR11A1Q9GZK7 315 aa18.45■□□□□ 0.54
PNKP-215ENST00000600910 PLSCR2Q9NRY7 297 aa18.45■□□□□ 0.54
PNKP-215ENST00000600910 TMCC3Q9ULS5 477 aa18.45■□□□□ 0.54
PNKP-215ENST00000600910 SPIN1Q9Y657 262 aaPredicted RBP18.45■□□□□ 0.54
PNKP-215ENST00000600910 ZNF407Q9C0G0 2248 aa18.44■□□□□ 0.54
PNKP-215ENST00000600910 TTLL8A6PVC2 850 aa18.44■□□□□ 0.54
PNKP-215ENST00000600910 A8MVM7 634 aa18.44■□□□□ 0.54
PNKP-215ENST00000600910 KPNA4O00629 521 aaPredicted RBP18.44■□□□□ 0.54
PNKP-215ENST00000600910 ZNF208O43345 1280 aa18.44■□□□□ 0.54
PNKP-215ENST00000600910 BMP7P18075 431 aa18.44■□□□□ 0.54
PNKP-215ENST00000600910 POU3F2P20265 443 aaPredicted RBP18.44■□□□□ 0.54
PNKP-215ENST00000600910 DNAJA1P31689 397 aaKnown RBP18.44■□□□□ 0.54
PNKP-215ENST00000600910 SFTPDP35247 375 aa18.44■□□□□ 0.54
PNKP-215ENST00000600910 LAPTM4AQ15012 233 aa18.44■□□□□ 0.54
PNKP-215ENST00000600910 SYT14P1Q58G82 188 aa18.44■□□□□ 0.54
PNKP-215ENST00000600910 ZNF730Q6ZMV8 503 aa18.44■□□□□ 0.54
PNKP-215ENST00000600910 SLC25A43Q8WUT9 341 aaPredicted RBP18.44■□□□□ 0.54
PNKP-215ENST00000600910 ABTB1Q969K4 478 aaPredicted RBP18.44■□□□□ 0.54
PNKP-215ENST00000600910 DDIT4LQ96D03 193 aa18.44■□□□□ 0.54
PNKP-215ENST00000600910 GPR137Q96N19 417 aa18.44■□□□□ 0.54
PNKP-215ENST00000600910 TMEM43Q9BTV4 400 aa18.44■□□□□ 0.54
PNKP-215ENST00000600910 ASF1BQ9NVP2 202 aa18.44■□□□□ 0.54
PNKP-215ENST00000600910 SPRR3Q9UBC9 169 aa18.44■□□□□ 0.54
PNKP-215ENST00000600910 TNFRSF10DQ9UBN6 386 aa18.44■□□□□ 0.54
PNKP-215ENST00000600910 A0A1B0GVC2 190 aa18.43■□□□□ 0.54
PNKP-215ENST00000600910 SH3PXD2BA1X283 911 aa18.43■□□□□ 0.54
PNKP-215ENST00000600910 ACTL6AO96019 429 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms