RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 CYTIPO60759 359 aa7.83□□□□□ -1.16
SSBP4-208ENST00000600628 NUDT14O95848 222 aa7.83□□□□□ -1.16
SSBP4-208ENST00000600628 OPN1LWP04000 364 aa7.83□□□□□ -1.16
SSBP4-208ENST00000600628 EPXP11678 715 aa7.83□□□□□ -1.16
SSBP4-208ENST00000600628 KLK2P20151 261 aa7.83□□□□□ -1.16
SSBP4-208ENST00000600628 ENPP1P22413 925 aa7.83□□□□□ -1.16
SSBP4-208ENST00000600628 LOXP28300 417 aaPredicted RBP7.83□□□□□ -1.16
SSBP4-208ENST00000600628 PRKAR1BP31321 381 aa7.83□□□□□ -1.16
SSBP4-208ENST00000600628 SFTPDP35247 375 aa7.83□□□□□ -1.16
SSBP4-208ENST00000600628 IDH2P48735 452 aaKnown RBP7.83□□□□□ -1.16
SSBP4-208ENST00000600628 DIO1P49895 249 aa7.83□□□□□ -1.16
SSBP4-208ENST00000600628 ARFIP2P53365 341 aa7.83□□□□□ -1.16
SSBP4-208ENST00000600628 SLC16A1P53985 500 aa7.83□□□□□ -1.16
SSBP4-208ENST00000600628 HPCAP84074 193 aa7.83□□□□□ -1.16
SSBP4-208ENST00000600628 CDK6Q00534 326 aa7.83□□□□□ -1.16
SSBP4-208ENST00000600628 RBBP4Q09028 425 aa7.83□□□□□ -1.16
SSBP4-208ENST00000600628 MERTKQ12866 999 aa7.83□□□□□ -1.16
SSBP4-208ENST00000600628 RNPS1Q15287 305 aaKnown RBP7.83□□□□□ -1.16
SSBP4-208ENST00000600628 TRMT5Q32P41 509 aaKnown RBP7.83□□□□□ -1.16
SSBP4-208ENST00000600628 HSP90B2PQ58FF3 399 aa7.83□□□□□ -1.16
SSBP4-208ENST00000600628 GCNT6Q5T4J0 391 aa7.83□□□□□ -1.16
SSBP4-208ENST00000600628 C8orf82Q6P1X6 216 aaPredicted RBP7.83□□□□□ -1.16
SSBP4-208ENST00000600628 C22orf34Q6ZV56 151 aa7.83□□□□□ -1.16
SSBP4-208ENST00000600628 CCDC80Q76M96 950 aa7.83□□□□□ -1.16
SSBP4-208ENST00000600628 P4HA3Q7Z4N8 544 aa7.83□□□□□ -1.16
SSBP4-208ENST00000600628 SERPINA11Q86U17 422 aa7.83□□□□□ -1.16
SSBP4-208ENST00000600628 KIF18BQ86Y91 864 aa7.83□□□□□ -1.16
SSBP4-208ENST00000600628 ZZZ3Q8IYH5 903 aa7.83□□□□□ -1.16
SSBP4-208ENST00000600628 SLC43A2Q8N370 569 aa7.83□□□□□ -1.16
SSBP4-208ENST00000600628 SMPDL3BQ92485 455 aa7.83□□□□□ -1.16
SSBP4-208ENST00000600628 C3orf49Q96BT1 292 aa7.83□□□□□ -1.16
SSBP4-208ENST00000600628 PSD2Q9BQI7 771 aa7.83□□□□□ -1.16
SSBP4-208ENST00000600628 WFDC6Q9BQY6 131 aa7.83□□□□□ -1.16
SSBP4-208ENST00000600628 RBM24Q9BX46 236 aaKnown RBP7.83□□□□□ -1.16
SSBP4-208ENST00000600628 MYLK2Q9H1R3 596 aa7.83□□□□□ -1.16
SSBP4-208ENST00000600628 CRIM1Q9NZV1 1036 aa7.83□□□□□ -1.16
SSBP4-208ENST00000600628 KLHL13Q9P2N7 655 aa7.83□□□□□ -1.16
SSBP4-208ENST00000600628 MCTS1Q9ULC4 181 aaKnown RBP7.83□□□□□ -1.16
SSBP4-208ENST00000600628 HDGFL3Q9Y3E1 203 aa7.83□□□□□ -1.16
SSBP4-208ENST00000600628 TEP1Q99973 2627 aaKnown RBP7.83□□□□□ -1.16
SSBP4-208ENST00000600628 TMED7-TICAM2A0A0A6YYA0 188 aa7.82□□□□□ -1.16
SSBP4-208ENST00000600628 TUBAL3A6NHL2 446 aa7.82□□□□□ -1.16
SSBP4-208ENST00000600628 ZNF724A8MTY0 619 aa7.82□□□□□ -1.16
SSBP4-208ENST00000600628 BBIP1A8MTZ0 92 aa7.82□□□□□ -1.16
SSBP4-208ENST00000600628 ZNF814B7Z6K7 855 aa7.82□□□□□ -1.16
SSBP4-208ENST00000600628 EEF1E1-BLOC1S5C9J1V9 151 aa7.82□□□□□ -1.16
SSBP4-208ENST00000600628 FTCDNL1E5RQL4 147 aa7.82□□□□□ -1.16
SSBP4-208ENST00000600628 SIAH2O43255 324 aa7.82□□□□□ -1.16
SSBP4-208ENST00000600628 EEF1E1O43324 174 aaKnown RBP7.82□□□□□ -1.16
SSBP4-208ENST00000600628 MFN2O95140 757 aa7.82□□□□□ -1.16
SSBP4-208ENST00000600628 VIMP08670 466 aaKnown RBP7.82□□□□□ -1.16
SSBP4-208ENST00000600628 GKN3PP0CG01 181 aa7.82□□□□□ -1.16
SSBP4-208ENST00000600628 IMPDH2P12268 514 aa7.82□□□□□ -1.16
SSBP4-208ENST00000600628 NTF4P34130 210 aa7.82□□□□□ -1.16
SSBP4-208ENST00000600628 RYKP34925 604 aa7.82□□□□□ -1.16
SSBP4-208ENST00000600628 CD79BP40259 229 aa7.82□□□□□ -1.16
SSBP4-208ENST00000600628 P2RY4P51582 365 aa7.82□□□□□ -1.16
SSBP4-208ENST00000600628 POLR2HP52434 150 aaKnown RBP7.82□□□□□ -1.16
SSBP4-208ENST00000600628 EGR4Q05215 589 aa7.82□□□□□ -1.16
SSBP4-208ENST00000600628 DMTNQ08495 405 aa7.82□□□□□ -1.16
SSBP4-208ENST00000600628 FAM27E3Q08E93 113 aa7.82□□□□□ -1.16
SSBP4-208ENST00000600628 LARS2Q15031 903 aaKnown RBP7.82□□□□□ -1.16
SSBP4-208ENST00000600628 SGCBQ16585 318 aa7.82□□□□□ -1.16
SSBP4-208ENST00000600628 GLIPR1L2Q4G1C9 344 aa7.82□□□□□ -1.16
SSBP4-208ENST00000600628 PDSS1Q5T2R2 415 aa7.82□□□□□ -1.16
SSBP4-208ENST00000600628 WBP2NLQ6ICG8 309 aa7.82□□□□□ -1.16
SSBP4-208ENST00000600628 NANOGP8Q6NSW7 305 aa7.82□□□□□ -1.16
SSBP4-208ENST00000600628 SEZ6L2Q6UXD5 910 aa7.82□□□□□ -1.16
SSBP4-208ENST00000600628 TFAP2EQ6VUC0 442 aa7.82□□□□□ -1.16
SSBP4-208ENST00000600628 STAC2Q6ZMT1 411 aa7.82□□□□□ -1.16
SSBP4-208ENST00000600628 FCRLAQ7L513 359 aa7.82□□□□□ -1.16
SSBP4-208ENST00000600628 ATG4DQ86TL0 474 aaPredicted RBP7.82□□□□□ -1.16
SSBP4-208ENST00000600628 MTDHQ86UE4 582 aaKnown RBP7.82□□□□□ -1.16
SSBP4-208ENST00000600628 GABRG1Q8N1C3 465 aa7.82□□□□□ -1.16
SSBP4-208ENST00000600628 TMCO5AQ8N6Q1 288 aa7.82□□□□□ -1.16
SSBP4-208ENST00000600628 ZNF610Q8N9Z0 462 aa7.82□□□□□ -1.16
SSBP4-208ENST00000600628 HIPK4Q8NE63 616 aa7.82□□□□□ -1.16
SSBP4-208ENST00000600628 OR8J3Q8NGG0 315 aa7.82□□□□□ -1.16
SSBP4-208ENST00000600628 NFKBIDQ8NI38 313 aa7.82□□□□□ -1.16
SSBP4-208ENST00000600628 ABHD3Q8WU67 409 aa7.82□□□□□ -1.16
SSBP4-208ENST00000600628 LRRC58Q96CX6 371 aa7.82□□□□□ -1.16
SSBP4-208ENST00000600628 ZNF583Q96ND8 569 aa7.82□□□□□ -1.16
SSBP4-208ENST00000600628 DACH2Q96NX9 599 aa7.82□□□□□ -1.16
SSBP4-208ENST00000600628 GPATCH1Q9BRR8 931 aaKnown RBP7.82□□□□□ -1.16
SSBP4-208ENST00000600628 POTEKPQ9BYX7 375 aa7.82□□□□□ -1.16
SSBP4-208ENST00000600628 OR11A1Q9GZK7 315 aa7.82□□□□□ -1.16
SSBP4-208ENST00000600628 PCDHAC1Q9H158 963 aa7.82□□□□□ -1.16
SSBP4-208ENST00000600628 OR10A4Q9H209 315 aa7.82□□□□□ -1.16
SSBP4-208ENST00000600628 NANOGQ9H9S0 305 aa7.82□□□□□ -1.16
SSBP4-208ENST00000600628 C12orf10Q9HB07 376 aa7.82□□□□□ -1.16
SSBP4-208ENST00000600628 TIGARQ9NQ88 270 aa7.82□□□□□ -1.16
SSBP4-208ENST00000600628 RASSF1Q9NS23 344 aa7.82□□□□□ -1.16
SSBP4-208ENST00000600628 FAM53CQ9NYF3 392 aa7.82□□□□□ -1.16
SSBP4-208ENST00000600628 ELOVL5Q9NYP7 299 aa7.82□□□□□ -1.16
SSBP4-208ENST00000600628 TMED7Q9Y3B3 224 aa7.82□□□□□ -1.16
SSBP4-208ENST00000600628 TESMINQ9Y4I5 508 aa7.82□□□□□ -1.16
SSBP4-208ENST00000600628 ZANQ9Y493 2812 aa7.81□□□□□ -1.16
SSBP4-208ENST00000600628 F8P00451 2351 aa7.81□□□□□ -1.16
SSBP4-208ENST00000600628 A0A1W2PPR1 153 aa7.81□□□□□ -1.16
SSBP4-208ENST00000600628 TMEM72A0PK05 275 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms