RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 FAM118AQ9NWS6 357 aa13.37□□□□□ -0.27
SHKBP1-211ENST00000595945 TUBA8Q9NY65 449 aaPredicted RBP13.37□□□□□ -0.27
SHKBP1-211ENST00000595945 TMEM5Q9Y2B1 443 aa13.37□□□□□ -0.27
SHKBP1-211ENST00000595945 TMED7-TICAM2A0A0A6YYA0 188 aa13.36□□□□□ -0.27
SHKBP1-211ENST00000595945 PINLYPA6NC86 204 aa13.36□□□□□ -0.27
SHKBP1-211ENST00000595945 NME2P1O60361 137 aa13.36□□□□□ -0.27
SHKBP1-211ENST00000595945 NPIPB7O75200 414 aa13.36□□□□□ -0.27
SHKBP1-211ENST00000595945 IFI30P13284 250 aa13.36□□□□□ -0.27
SHKBP1-211ENST00000595945 OSMP13725 252 aa13.36□□□□□ -0.27
SHKBP1-211ENST00000595945 MAKP20794 623 aa13.36□□□□□ -0.27
SHKBP1-211ENST00000595945 NME2P22392 152 aa13.36□□□□□ -0.27
SHKBP1-211ENST00000595945 EPHA2P29317 976 aa13.36□□□□□ -0.27
SHKBP1-211ENST00000595945 POLR2IP36954 125 aaKnown RBP13.36□□□□□ -0.27
SHKBP1-211ENST00000595945 MASP1P48740 699 aa13.36□□□□□ -0.27
SHKBP1-211ENST00000595945 ZNF41P51814 821 aaPredicted RBP13.36□□□□□ -0.27
SHKBP1-211ENST00000595945 DSCR4P56555 118 aaPredicted RBP13.36□□□□□ -0.27
SHKBP1-211ENST00000595945 ESRRGP62508 458 aa13.36□□□□□ -0.27
SHKBP1-211ENST00000595945 TLE3Q04726 772 aa13.36□□□□□ -0.27
SHKBP1-211ENST00000595945 EGR4Q05215 589 aa13.36□□□□□ -0.27
SHKBP1-211ENST00000595945 FOXF1Q12946 379 aa13.36□□□□□ -0.27
SHKBP1-211ENST00000595945 NPRL3Q12980 569 aa13.36□□□□□ -0.27
SHKBP1-211ENST00000595945 TAF11Q15544 211 aa13.36□□□□□ -0.27
SHKBP1-211ENST00000595945 TMEM44Q2T9K0 475 aa13.36□□□□□ -0.27
SHKBP1-211ENST00000595945 WLSQ5T9L3 541 aa13.36□□□□□ -0.27
SHKBP1-211ENST00000595945 SLC25A25Q6KCM7 469 aa13.36□□□□□ -0.27
SHKBP1-211ENST00000595945 RASSF6Q6ZTQ3 369 aa13.36□□□□□ -0.27
SHKBP1-211ENST00000595945 MEX3DQ86XN8 651 aaKnown RBP13.36□□□□□ -0.27
SHKBP1-211ENST00000595945 OR1J4Q8NGS1 313 aa13.36□□□□□ -0.27
SHKBP1-211ENST00000595945 SCMH1Q96GD3 660 aa13.36□□□□□ -0.27
SHKBP1-211ENST00000595945 MRGPRX4Q96LA9 322 aa13.36□□□□□ -0.27
SHKBP1-211ENST00000595945 PITX2Q99697 317 aa13.36□□□□□ -0.27
SHKBP1-211ENST00000595945 SMAD5Q99717 465 aaKnown RBP13.36□□□□□ -0.27
SHKBP1-211ENST00000595945 FAM173AQ9BQD7 235 aa13.36□□□□□ -0.27
SHKBP1-211ENST00000595945 ANKRD60Q9BZ19 345 aa13.36□□□□□ -0.27
SHKBP1-211ENST00000595945 GRIP2Q9C0E4 1043 aa13.36□□□□□ -0.27
SHKBP1-211ENST00000595945 PTGES2Q9H7Z7 377 aa13.36□□□□□ -0.27
SHKBP1-211ENST00000595945 KRCC1Q9NPI7 259 aaPredicted RBP13.36□□□□□ -0.27
SHKBP1-211ENST00000595945 TMED7Q9Y3B3 224 aa13.36□□□□□ -0.27
SHKBP1-211ENST00000595945 TMEM72A0PK05 275 aa13.35□□□□□ -0.27
SHKBP1-211ENST00000595945 ENO4A6NNW6 628 aa13.35□□□□□ -0.27
SHKBP1-211ENST00000595945 EFNA2O43921 213 aa13.35□□□□□ -0.27
SHKBP1-211ENST00000595945 CBR3O75828 277 aa13.35□□□□□ -0.27
SHKBP1-211ENST00000595945 SP1P08047 785 aa13.35□□□□□ -0.27
SHKBP1-211ENST00000595945 PTNP21246 168 aa13.35□□□□□ -0.27
SHKBP1-211ENST00000595945 CXCR1P25024 350 aa13.35□□□□□ -0.27
SHKBP1-211ENST00000595945 APOBEC1P41238 236 aaKnown RBP13.35□□□□□ -0.27
SHKBP1-211ENST00000595945 GPR4P46093 362 aa13.35□□□□□ -0.27
SHKBP1-211ENST00000595945 IL1RL1Q01638 556 aa13.35□□□□□ -0.27
SHKBP1-211ENST00000595945 CRYZQ08257 329 aaKnown RBP13.35□□□□□ -0.27
SHKBP1-211ENST00000595945 TTC23Q5W5X9 447 aa13.35□□□□□ -0.27
SHKBP1-211ENST00000595945 SLC46A3Q7Z3Q1 461 aa13.35□□□□□ -0.27
SHKBP1-211ENST00000595945 KIF18BQ86Y91 864 aa13.35□□□□□ -0.27
SHKBP1-211ENST00000595945 P3H2Q8IVL5 708 aa13.35□□□□□ -0.27
SHKBP1-211ENST00000595945 OR2M7Q8NG81 312 aa13.35□□□□□ -0.27
SHKBP1-211ENST00000595945 STK35Q8TDR2 534 aa13.35□□□□□ -0.27
SHKBP1-211ENST00000595945 CYGBQ8WWM9 190 aa13.35□□□□□ -0.27
SHKBP1-211ENST00000595945 LIPHQ8WWY8 451 aa13.35□□□□□ -0.27
SHKBP1-211ENST00000595945 BPIFA2Q96DR5 249 aa13.35□□□□□ -0.27
SHKBP1-211ENST00000595945 GNRHR2Q96P88 292 aa13.35□□□□□ -0.27
SHKBP1-211ENST00000595945 HES7Q9BYE0 225 aa13.35□□□□□ -0.27
SHKBP1-211ENST00000595945 UBQLN3Q9H347 655 aa13.35□□□□□ -0.27
SHKBP1-211ENST00000595945 RIBC2Q9H4K1 309 aa13.35□□□□□ -0.27
SHKBP1-211ENST00000595945 ENOPH1Q9UHY7 261 aa13.35□□□□□ -0.27
SHKBP1-211ENST00000595945 VDAC3Q9Y277 283 aa13.35□□□□□ -0.27
SHKBP1-211ENST00000595945 LRCH1Q9Y2L9 728 aa13.35□□□□□ -0.27
SHKBP1-211ENST00000595945 MAP1BP46821 2468 aaKnown RBP13.35□□□□□ -0.27
SHKBP1-211ENST00000595945 DMXL2Q8TDJ6 3036 aa13.34□□□□□ -0.27
SHKBP1-211ENST00000595945 ALPK2Q86TB3 2170 aa13.34□□□□□ -0.27
SHKBP1-211ENST00000595945 UNC119BA6NIH7 251 aa13.34□□□□□ -0.27
SHKBP1-211ENST00000595945 FAM47E-STBD1D6RA91 191 aa13.34□□□□□ -0.27
SHKBP1-211ENST00000595945 K7ENP7 123 aa13.34□□□□□ -0.27
SHKBP1-211ENST00000595945 KPNA4O00629 521 aaPredicted RBP13.34□□□□□ -0.27
SHKBP1-211ENST00000595945 CDC42EP2O14613 210 aa13.34□□□□□ -0.27
SHKBP1-211ENST00000595945 RRP8O43159 456 aaKnown RBP13.34□□□□□ -0.27
SHKBP1-211ENST00000595945 ZNF208O43345 1280 aa13.34□□□□□ -0.27
SHKBP1-211ENST00000595945 DPP4P27487 766 aa13.34□□□□□ -0.27
SHKBP1-211ENST00000595945 ADH6P28332 368 aa13.34□□□□□ -0.27
SHKBP1-211ENST00000595945 SRD5A2P31213 254 aa13.34□□□□□ -0.27
SHKBP1-211ENST00000595945 HOXD11P31277 338 aaPredicted RBP13.34□□□□□ -0.27
SHKBP1-211ENST00000595945 EIF1P41567 113 aaKnown RBP13.34□□□□□ -0.27
SHKBP1-211ENST00000595945 TNFSF10P50591 281 aa13.34□□□□□ -0.27
SHKBP1-211ENST00000595945 CRISP1P54107 249 aa13.34□□□□□ -0.27
SHKBP1-211ENST00000595945 ARG2P78540 354 aa13.34□□□□□ -0.27
SHKBP1-211ENST00000595945 FHL1Q13642 323 aa13.34□□□□□ -0.27
SHKBP1-211ENST00000595945 GLYR1Q49A26 553 aaPredicted RBP13.34□□□□□ -0.27
SHKBP1-211ENST00000595945 INO80CQ6PI98 192 aaPredicted RBP13.34□□□□□ -0.27
SHKBP1-211ENST00000595945 SULF2Q8IWU5 870 aa13.34□□□□□ -0.27
SHKBP1-211ENST00000595945 GTPBP8Q8N3Z3 284 aaPredicted RBP13.34□□□□□ -0.27
SHKBP1-211ENST00000595945 MARVELD2Q8N4S9 558 aa13.34□□□□□ -0.27
SHKBP1-211ENST00000595945 CLDN22Q8N7P3 220 aa13.34□□□□□ -0.27
SHKBP1-211ENST00000595945 ZBTB8AQ96BR9 441 aa13.34□□□□□ -0.27
SHKBP1-211ENST00000595945 SGTBQ96EQ0 304 aa13.34□□□□□ -0.27
SHKBP1-211ENST00000595945 Q9H521 79 aa13.34□□□□□ -0.27
SHKBP1-211ENST00000595945 ZFP64Q9NPA5 681 aa13.34□□□□□ -0.27
SHKBP1-211ENST00000595945 NDRG4Q9ULP0 352 aaKnown RBP13.34□□□□□ -0.27
SHKBP1-211ENST00000595945 KLF13Q9Y2Y9 288 aaPredicted RBP13.34□□□□□ -0.27
SHKBP1-211ENST00000595945 MRPS18CQ9Y3D5 142 aaKnown RBP13.34□□□□□ -0.27
SHKBP1-211ENST00000595945 PCDHGA9Q9Y5G4 932 aaKnown RBP13.34□□□□□ -0.27
SHKBP1-211ENST00000595945 MGAQ8IWI9 3026 aa13.33□□□□□ -0.28
SHKBP1-211ENST00000595945 TLN1Q9Y490 2541 aaKnown RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms