RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 POMZP3Q6PJE2 187 aa23.11■■□□□ 1.29
TRIM28-204ENST00000594806 CADM2Q8N3J6 435 aa23.11■■□□□ 1.29
TRIM28-204ENST00000594806 LSMEM1Q8N8F7 131 aa23.11■■□□□ 1.29
TRIM28-204ENST00000594806 FNDC9Q8TBE3 224 aa23.11■■□□□ 1.29
TRIM28-204ENST00000594806 FIG4Q92562 907 aa23.11■■□□□ 1.29
TRIM28-204ENST00000594806 RSPO3Q9BXY4 272 aaPredicted RBP23.11■■□□□ 1.29
TRIM28-204ENST00000594806 TRIM2Q9C040 744 aa23.11■■□□□ 1.29
TRIM28-204ENST00000594806 SPAG4Q9NPE6 437 aa23.11■■□□□ 1.29
TRIM28-204ENST00000594806 GLRX2Q9NS18 164 aa23.11■■□□□ 1.29
TRIM28-204ENST00000594806 TESQ9UGI8 421 aaKnown RBP23.11■■□□□ 1.29
TRIM28-204ENST00000594806 TMED7Q9Y3B3 224 aa23.11■■□□□ 1.29
TRIM28-204ENST00000594806 PRG2P13727 222 aa23.1■■□□□ 1.29
TRIM28-204ENST00000594806 CXCR1P25024 350 aa23.1■■□□□ 1.29
TRIM28-204ENST00000594806 RGS8P57771 180 aaPredicted RBP23.1■■□□□ 1.29
TRIM28-204ENST00000594806 CSNK2A1P68400 391 aaPredicted RBP23.1■■□□□ 1.29
TRIM28-204ENST00000594806 LIPEQ05469 1076 aa23.1■■□□□ 1.29
TRIM28-204ENST00000594806 CDSNQ15517 529 aa23.1■■□□□ 1.29
TRIM28-204ENST00000594806 DUSP7Q16829 419 aa23.1■■□□□ 1.29
TRIM28-204ENST00000594806 TMPPEQ6ZT21 453 aa23.1■■□□□ 1.29
TRIM28-204ENST00000594806 FITM2Q8N6M3 262 aa23.1■■□□□ 1.29
TRIM28-204ENST00000594806 BCAS4Q8TDM0 211 aa23.1■■□□□ 1.29
TRIM28-204ENST00000594806 DDIT4LQ96D03 193 aa23.1■■□□□ 1.29
TRIM28-204ENST00000594806 ZNF559Q9BR84 538 aa23.1■■□□□ 1.29
TRIM28-204ENST00000594806 ALG2Q9H553 416 aa23.1■■□□□ 1.29
TRIM28-204ENST00000594806 COQ10BQ9H8M1 238 aa23.1■■□□□ 1.29
TRIM28-204ENST00000594806 C12orf10Q9HB07 376 aa23.1■■□□□ 1.29
TRIM28-204ENST00000594806 ARL8BQ9NVJ2 186 aa23.1■■□□□ 1.29
TRIM28-204ENST00000594806 PRSS44E7EML9 344 aa23.09■■□□□ 1.29
TRIM28-204ENST00000594806 NME4O00746 187 aa23.09■■□□□ 1.29
TRIM28-204ENST00000594806 DNPH1O43598 174 aa23.09■■□□□ 1.29
TRIM28-204ENST00000594806 NCALDP61601 193 aa23.09■■□□□ 1.29
TRIM28-204ENST00000594806 GLIPR1L2Q4G1C9 344 aa23.09■■□□□ 1.29
TRIM28-204ENST00000594806 RANBP3LQ86VV4 465 aaPredicted RBP23.09■■□□□ 1.29
TRIM28-204ENST00000594806 SMYD1Q8NB12 490 aa23.09■■□□□ 1.29
TRIM28-204ENST00000594806 DNAJA4Q8WW22 397 aaPredicted RBP23.09■■□□□ 1.29
TRIM28-204ENST00000594806 TAMM41Q96BW9 452 aa23.09■■□□□ 1.29
TRIM28-204ENST00000594806 INTS12Q96CB8 462 aaKnown RBP23.09■■□□□ 1.29
TRIM28-204ENST00000594806 LRRC46Q96FV0 321 aa23.09■■□□□ 1.29
TRIM28-204ENST00000594806 OR5B2Q96R09 309 aa23.09■■□□□ 1.29
TRIM28-204ENST00000594806 RPS6KB2Q9UBS0 482 aa23.09■■□□□ 1.29
TRIM28-204ENST00000594806 BAG5Q9UL15 447 aa23.09■■□□□ 1.29
TRIM28-204ENST00000594806 FRS3O43559 492 aa23.08■■□□□ 1.29
TRIM28-204ENST00000594806 FMO6PO60774 539 aa23.08■■□□□ 1.29
TRIM28-204ENST00000594806 PMS2P2O95744 297 aa23.08■■□□□ 1.29
TRIM28-204ENST00000594806 OPN1SWP03999 348 aa23.08■■□□□ 1.29
TRIM28-204ENST00000594806 TFPIP10646 304 aa23.08■■□□□ 1.29
TRIM28-204ENST00000594806 KDELR2P33947 212 aa23.08■■□□□ 1.29
TRIM28-204ENST00000594806 ZNF239Q16600 458 aaKnown RBP23.08■■□□□ 1.29
TRIM28-204ENST00000594806 LIX1LQ8IVB5 337 aa23.08■■□□□ 1.29
TRIM28-204ENST00000594806 SLC43A2Q8N370 569 aa23.08■■□□□ 1.29
TRIM28-204ENST00000594806 OR52E4Q8NGH9 312 aa23.08■■□□□ 1.29
TRIM28-204ENST00000594806 ARHGDIGQ99819 225 aa23.08■■□□□ 1.29
TRIM28-204ENST00000594806 POTEKPQ9BYX7 375 aa23.08■■□□□ 1.29
TRIM28-204ENST00000594806 PIGMQ9H3S5 423 aa23.08■■□□□ 1.29
TRIM28-204ENST00000594806 TMEM27Q9HBJ8 222 aa23.08■■□□□ 1.29
TRIM28-204ENST00000594806 TMEM181Q9P2C4 612 aa23.08■■□□□ 1.29
TRIM28-204ENST00000594806 TRAPPC4Q9Y296 219 aa23.08■■□□□ 1.29
TRIM28-204ENST00000594806 FAM90A27PA6NNH2 459 aa23.07■■□□□ 1.28
TRIM28-204ENST00000594806 SULT2B1O00204 365 aa23.07■■□□□ 1.28
TRIM28-204ENST00000594806 FESP07332 822 aa23.07■■□□□ 1.28
TRIM28-204ENST00000594806 CD247P20963 164 aa23.07■■□□□ 1.28
TRIM28-204ENST00000594806 BMP5P22003 454 aa23.07■■□□□ 1.28
TRIM28-204ENST00000594806 CPA2P48052 419 aa23.07■■□□□ 1.28
TRIM28-204ENST00000594806 RNPS1Q15287 305 aaKnown RBP23.07■■□□□ 1.28
TRIM28-204ENST00000594806 NRF1Q16656 503 aa23.07■■□□□ 1.28
TRIM28-204ENST00000594806 C6orf89Q6UWU4 347 aa23.07■■□□□ 1.28
TRIM28-204ENST00000594806 COMTD1Q86VU5 262 aa23.07■■□□□ 1.28
TRIM28-204ENST00000594806 PGAM4Q8N0Y7 254 aa23.07■■□□□ 1.28
TRIM28-204ENST00000594806 GPR32P1Q8NGA4 272 aa23.07■■□□□ 1.28
TRIM28-204ENST00000594806 PROX1Q92786 737 aa23.07■■□□□ 1.28
TRIM28-204ENST00000594806 C3orf49Q96BT1 292 aa23.07■■□□□ 1.28
TRIM28-204ENST00000594806 GMPPAQ96IJ6 420 aaPredicted RBP23.07■■□□□ 1.28
TRIM28-204ENST00000594806 GP6Q9HCN6 339 aa23.07■■□□□ 1.28
TRIM28-204ENST00000594806 USP22Q9UPT9 525 aa23.07■■□□□ 1.28
TRIM28-204ENST00000594806 SLC9A8Q9Y2E8 581 aa23.07■■□□□ 1.28
TRIM28-204ENST00000594806 HCFC1P51610 2035 aa23.06■■□□□ 1.28
TRIM28-204ENST00000594806 MPDZO75970 2070 aa23.06■■□□□ 1.28
TRIM28-204ENST00000594806 A0A1W2PNR3 127 aa23.06■■□□□ 1.28
TRIM28-204ENST00000594806 TMEM72A0PK05 275 aa23.06■■□□□ 1.28
TRIM28-204ENST00000594806 AQP8O94778 261 aa23.06■■□□□ 1.28
TRIM28-204ENST00000594806 GSK3BP49841 420 aa23.06■■□□□ 1.28
TRIM28-204ENST00000594806 DIO1P49895 249 aa23.06■■□□□ 1.28
TRIM28-204ENST00000594806 PPP4R4Q6NUP7 873 aa23.06■■□□□ 1.28
TRIM28-204ENST00000594806 ULK3Q6PHR2 472 aa23.06■■□□□ 1.28
TRIM28-204ENST00000594806 PLXDC2Q6UX71 529 aa23.06■■□□□ 1.28
TRIM28-204ENST00000594806 C16orf89Q6UX73 402 aa23.06■■□□□ 1.28
TRIM28-204ENST00000594806 ATG4DQ86TL0 474 aaPredicted RBP23.06■■□□□ 1.28
TRIM28-204ENST00000594806 ZHX1-C8orf76Q96EF9 292 aa23.06■■□□□ 1.28
TRIM28-204ENST00000594806 NSL1Q96IY1 281 aa23.06■■□□□ 1.28
TRIM28-204ENST00000594806 KCTD14Q9BQ13 255 aaPredicted RBP23.06■■□□□ 1.28
TRIM28-204ENST00000594806 SRXN1Q9BYN0 137 aa23.06■■□□□ 1.28
TRIM28-204ENST00000594806 UCK2Q9BZX2 261 aa23.06■■□□□ 1.28
TRIM28-204ENST00000594806 FOXD3Q9UJU5 478 aaPredicted RBP23.06■■□□□ 1.28
TRIM28-204ENST00000594806 A0A1W2PNV4 684 aa23.05■■□□□ 1.28
TRIM28-204ENST00000594806 A8MVM7 634 aa23.05■■□□□ 1.28
TRIM28-204ENST00000594806 GSTA4O15217 222 aa23.05■■□□□ 1.28
TRIM28-204ENST00000594806 PNMTP11086 282 aa23.05■■□□□ 1.28
TRIM28-204ENST00000594806 ENPP1P22413 925 aa23.05■■□□□ 1.28
TRIM28-204ENST00000594806 ASCL1P50553 236 aa23.05■■□□□ 1.28
TRIM28-204ENST00000594806 CRYBA2P53672 197 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms