RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 ZNF527Q8NB42 609 aa18.06■□□□□ 0.48
CLIP3-206ENST00000593074 SLC2A12Q8TD20 617 aa18.06■□□□□ 0.48
CLIP3-206ENST00000593074 TSLPQ969D9 159 aa18.06■□□□□ 0.48
CLIP3-206ENST00000593074 SGTBQ96EQ0 304 aa18.06■□□□□ 0.48
CLIP3-206ENST00000593074 TMED9Q9BVK6 235 aa18.06■□□□□ 0.48
CLIP3-206ENST00000593074 ADGRL4Q9HBW9 690 aa18.06■□□□□ 0.48
CLIP3-206ENST00000593074 UBQLN4Q9NRR5 601 aa18.06■□□□□ 0.48
CLIP3-206ENST00000593074 LAMA1P25391 3075 aa18.06■□□□□ 0.48
CLIP3-206ENST00000593074 GABRPO00591 440 aa18.05■□□□□ 0.48
CLIP3-206ENST00000593074 PPM1BO75688 479 aa18.05■□□□□ 0.48
CLIP3-206ENST00000593074 NDUFB2O95178 105 aa18.05■□□□□ 0.48
CLIP3-206ENST00000593074 TMEM151BQ8IW70 566 aa18.05■□□□□ 0.48
CLIP3-206ENST00000593074 CADM3Q8N126 398 aa18.05■□□□□ 0.48
CLIP3-206ENST00000593074 CCDC74AQ96AQ1 378 aa18.05■□□□□ 0.48
CLIP3-206ENST00000593074 CCNL2Q96S94 520 aaPredicted RBP18.05■□□□□ 0.48
CLIP3-206ENST00000593074 SLC19A3Q9BZV2 496 aa18.05■□□□□ 0.48
CLIP3-206ENST00000593074 POLHQ9Y253 713 aa18.05■□□□□ 0.48
CLIP3-206ENST00000593074 SDK1Q7Z5N4 2213 aa18.05■□□□□ 0.48
CLIP3-206ENST00000593074 DAPL1A0PJW8 107 aa18.05■□□□□ 0.48
CLIP3-206ENST00000593074 FRG2CA6NGY1 282 aa18.05■□□□□ 0.48
CLIP3-206ENST00000593074 GNB5O14775 395 aa18.05■□□□□ 0.48
CLIP3-206ENST00000593074 DYRK3O43781 588 aa18.05■□□□□ 0.48
CLIP3-206ENST00000593074 CLUP10909 449 aa18.05■□□□□ 0.48
CLIP3-206ENST00000593074 RORAP35398 523 aa18.05■□□□□ 0.48
CLIP3-206ENST00000593074 CD97P48960 835 aa18.05■□□□□ 0.48
CLIP3-206ENST00000593074 RPS7P62081 194 aaKnown RBP18.05■□□□□ 0.48
CLIP3-206ENST00000593074 CD226Q15762 336 aa18.05■□□□□ 0.48
CLIP3-206ENST00000593074 PRAMEF17Q5VTA0 474 aa18.05■□□□□ 0.48
CLIP3-206ENST00000593074 WDR5BQ86VZ2 330 aa18.05■□□□□ 0.48
CLIP3-206ENST00000593074 CYB561A3Q8NBI2 242 aa18.05■□□□□ 0.48
CLIP3-206ENST00000593074 NXF5Q9H1B4 397 aaKnown RBP18.05■□□□□ 0.48
CLIP3-206ENST00000593074 OR51V1Q9H2C8 321 aa18.05■□□□□ 0.48
CLIP3-206ENST00000593074 EXOSC3Q9NQT5 275 aaKnown RBP18.05■□□□□ 0.48
CLIP3-206ENST00000593074 BABAM2Q9NXR7 383 aa18.05■□□□□ 0.48
CLIP3-206ENST00000593074 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.04■□□□□ 0.48
CLIP3-206ENST00000593074 PRKNO60260 465 aaPredicted RBP18.04■□□□□ 0.48
CLIP3-206ENST00000593074 REM1O75628 298 aa18.04■□□□□ 0.48
CLIP3-206ENST00000593074 DDAH2O95865 285 aa18.04■□□□□ 0.48
CLIP3-206ENST00000593074 SBK2P0C263 348 aa18.04■□□□□ 0.48
CLIP3-206ENST00000593074 DBPQ10586 325 aaPredicted RBP18.04■□□□□ 0.48
CLIP3-206ENST00000593074 SKP2Q13309 424 aa18.04■□□□□ 0.48
CLIP3-206ENST00000593074 KRR1Q13601 381 aaKnown RBP18.04■□□□□ 0.48
CLIP3-206ENST00000593074 ELAVL1Q15717 326 aaKnown RBP18.04■□□□□ 0.48
CLIP3-206ENST00000593074 ZNF79Q15937 498 aa18.04■□□□□ 0.48
CLIP3-206ENST00000593074 PMS2CLQ68D20 193 aa18.04■□□□□ 0.48
CLIP3-206ENST00000593074 FAM181AQ8N9Y4 354 aa18.04■□□□□ 0.48
CLIP3-206ENST00000593074 OR10H4Q8NGA5 316 aa18.04■□□□□ 0.48
CLIP3-206ENST00000593074 OR5M3Q8NGP4 307 aa18.04■□□□□ 0.48
CLIP3-206ENST00000593074 ZNF721Q8TF20 911 aa18.04■□□□□ 0.48
CLIP3-206ENST00000593074 AP3S1Q92572 193 aa18.04■□□□□ 0.48
CLIP3-206ENST00000593074 TBX5Q99593 518 aa18.04■□□□□ 0.48
CLIP3-206ENST00000593074 DUSP23Q9BVJ7 150 aa18.04■□□□□ 0.48
CLIP3-206ENST00000593074 MIXL1Q9H2W2 232 aa18.04■□□□□ 0.48
CLIP3-206ENST00000593074 ZNF304Q9HCX3 659 aa18.04■□□□□ 0.48
CLIP3-206ENST00000593074 SUSD2Q9UGT4 822 aa18.04■□□□□ 0.48
CLIP3-206ENST00000593074 FBXL4Q9UKA2 621 aa18.04■□□□□ 0.48
CLIP3-206ENST00000593074 TCRBV16S1A1N1A0A5B0 115 aa18.03■□□□□ 0.48
CLIP3-206ENST00000593074 UBL4AP11441 157 aa18.03■□□□□ 0.48
CLIP3-206ENST00000593074 EPHA8P29322 1005 aaPredicted RBP18.03■□□□□ 0.48
CLIP3-206ENST00000593074 EFNA3P52797 238 aa18.03■□□□□ 0.48
CLIP3-206ENST00000593074 CSTF1Q05048 431 aaKnown RBP18.03■□□□□ 0.48
CLIP3-206ENST00000593074 POU4F2Q12837 409 aa18.03■□□□□ 0.48
CLIP3-206ENST00000593074 ADIPOR1Q96A54 375 aa18.03■□□□□ 0.48
CLIP3-206ENST00000593074 ERMAPQ96PL5 475 aaPredicted RBP18.03■□□□□ 0.48
CLIP3-206ENST00000593074 NUDT22Q9BRQ3 303 aa18.03■□□□□ 0.48
CLIP3-206ENST00000593074 HDHD5Q9BXW7 423 aa18.03■□□□□ 0.48
CLIP3-206ENST00000593074 OR8D2Q9GZM6 311 aa18.03■□□□□ 0.48
CLIP3-206ENST00000593074 TRIM36Q9NQ86 728 aa18.03■□□□□ 0.48
CLIP3-206ENST00000593074 CLCA3PQ9Y6N3 262 aa18.03■□□□□ 0.48
CLIP3-206ENST00000593074 HEATR5AQ86XA9 2040 aa18.03■□□□□ 0.48
CLIP3-206ENST00000593074 ADAMTS20P59510 1910 aa18.03■□□□□ 0.48
CLIP3-206ENST00000593074 IGKV1D-42A0A075B6H8 117 aa18.03■□□□□ 0.48
CLIP3-206ENST00000593074 MCIDASD6RGH6 385 aa18.03■□□□□ 0.48
CLIP3-206ENST00000593074 RNF13O43567 381 aa18.03■□□□□ 0.48
CLIP3-206ENST00000593074 PDGFBP01127 241 aaPredicted RBP18.03■□□□□ 0.48
CLIP3-206ENST00000593074 IGF2P01344 180 aa18.03■□□□□ 0.48
CLIP3-206ENST00000593074 FBLP22087 321 aaKnown RBP18.03■□□□□ 0.48
CLIP3-206ENST00000593074 SLC16A1P53985 500 aa18.03■□□□□ 0.48
CLIP3-206ENST00000593074 DEFA1P59665 94 aa18.03■□□□□ 0.48
CLIP3-206ENST00000593074 DEFA3P59666 94 aa18.03■□□□□ 0.48
CLIP3-206ENST00000593074 RPS4XP62701 263 aaKnown RBP18.03■□□□□ 0.48
CLIP3-206ENST00000593074 WBP2NLQ6ICG8 309 aa18.03■□□□□ 0.48
CLIP3-206ENST00000593074 MARCH9Q86YJ5 346 aa18.03■□□□□ 0.48
CLIP3-206ENST00000593074 LRRC17Q8N6Y2 441 aa18.03■□□□□ 0.48
CLIP3-206ENST00000593074 C7orf57Q8NEG2 295 aa18.03■□□□□ 0.48
CLIP3-206ENST00000593074 HTRA1Q92743 480 aa18.03■□□□□ 0.48
CLIP3-206ENST00000593074 CLIP3Q96DZ5 547 aa18.03■□□□□ 0.48
CLIP3-206ENST00000593074 LCORQ96JN0 433 aaPredicted RBP18.03■□□□□ 0.48
CLIP3-206ENST00000593074 DPYSL5Q9BPU6 564 aa18.03■□□□□ 0.48
CLIP3-206ENST00000593074 ABCB9Q9NP78 766 aa18.03■□□□□ 0.48
CLIP3-206ENST00000593074 FGF21Q9NSA1 209 aa18.03■□□□□ 0.48
CLIP3-206ENST00000593074 KLHL21Q9UJP4 597 aa18.03■□□□□ 0.48
CLIP3-206ENST00000593074 PILRBQ9UKJ0 227 aa18.03■□□□□ 0.48
CLIP3-206ENST00000593074 ZNF337Q9Y3M9 751 aa18.03■□□□□ 0.48
CLIP3-206ENST00000593074 A0A1W2PQL4 384 aaPredicted RBP18.02■□□□□ 0.48
CLIP3-206ENST00000593074 HTR3EA5X5Y0 456 aa18.02■□□□□ 0.48
CLIP3-206ENST00000593074 A8MUA0 341 aa18.02■□□□□ 0.48
CLIP3-206ENST00000593074 SCDO00767 359 aa18.02■□□□□ 0.48
CLIP3-206ENST00000593074 OR7A10O76100 309 aa18.02■□□□□ 0.48
CLIP3-206ENST00000593074 UTS2O95399 124 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms