RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 UCN2Q96RP3 112 aa13.42□□□□□ -0.26
DDX39A-221ENST00000593026 MCHR1Q99705 422 aa13.42□□□□□ -0.26
DDX39A-221ENST00000593026 WFDC6Q9BQY6 131 aa13.42□□□□□ -0.26
DDX39A-221ENST00000593026 PRR14Q9BWN1 585 aa13.42□□□□□ -0.26
DDX39A-221ENST00000593026 TMEM27Q9HBJ8 222 aa13.42□□□□□ -0.26
DDX39A-221ENST00000593026 TAS2R1Q9NYW7 299 aa13.42□□□□□ -0.26
DDX39A-221ENST00000593026 CLCF1Q9UBD9 225 aa13.42□□□□□ -0.26
DDX39A-221ENST00000593026 MAGEL2Q9UJ55 1249 aa13.42□□□□□ -0.26
DDX39A-221ENST00000593026 PHF3Q92576 2039 aaKnown RBP13.41□□□□□ -0.26
DDX39A-221ENST00000593026 FLNBO75369 2602 aaKnown RBP13.41□□□□□ -0.26
DDX39A-221ENST00000593026 A0A1B0GWA3 101 aa13.41□□□□□ -0.26
DDX39A-221ENST00000593026 MBD3L4A6NDZ8 208 aaPredicted RBP13.41□□□□□ -0.26
DDX39A-221ENST00000593026 MBD3L3A6NE82 208 aaPredicted RBP13.41□□□□□ -0.26
DDX39A-221ENST00000593026 MBD3L5A6NJ08 208 aaPredicted RBP13.41□□□□□ -0.26
DDX39A-221ENST00000593026 SLC22A20A6NK97 555 aa13.41□□□□□ -0.26
DDX39A-221ENST00000593026 FMO6PO60774 539 aa13.41□□□□□ -0.26
DDX39A-221ENST00000593026 SYNGR4O95473 234 aa13.41□□□□□ -0.26
DDX39A-221ENST00000593026 ZNF682O95780 498 aa13.41□□□□□ -0.26
DDX39A-221ENST00000593026 SERPINA1P01009 418 aa13.41□□□□□ -0.26
DDX39A-221ENST00000593026 TNFRSF1BP20333 461 aa13.41□□□□□ -0.26
DDX39A-221ENST00000593026 TIMP3P35625 211 aa13.41□□□□□ -0.26
DDX39A-221ENST00000593026 CARD18P57730 90 aa13.41□□□□□ -0.26
DDX39A-221ENST00000593026 CBX1P83916 185 aa13.41□□□□□ -0.26
DDX39A-221ENST00000593026 PON3Q15166 354 aa13.41□□□□□ -0.26
DDX39A-221ENST00000593026 OR1Q1Q15612 314 aa13.41□□□□□ -0.26
DDX39A-221ENST00000593026 NPTX1Q15818 432 aa13.41□□□□□ -0.26
DDX39A-221ENST00000593026 RIPPLY2Q5TAB7 128 aa13.41□□□□□ -0.26
DDX39A-221ENST00000593026 PPP4R4Q6NUP7 873 aa13.41□□□□□ -0.26
DDX39A-221ENST00000593026 PLXDC2Q6UX71 529 aa13.41□□□□□ -0.26
DDX39A-221ENST00000593026 P4HA3Q7Z4N8 544 aa13.41□□□□□ -0.26
DDX39A-221ENST00000593026 CARM1Q86X55 608 aa13.41□□□□□ -0.26
DDX39A-221ENST00000593026 OR4D11Q8NGI4 311 aa13.41□□□□□ -0.26
DDX39A-221ENST00000593026 MBD3L2Q8NHZ7 208 aaPredicted RBP13.41□□□□□ -0.26
DDX39A-221ENST00000593026 OSTF1Q92882 214 aa13.41□□□□□ -0.26
DDX39A-221ENST00000593026 WNT2BQ93097 391 aa13.41□□□□□ -0.26
DDX39A-221ENST00000593026 DDIT4LQ96D03 193 aa13.41□□□□□ -0.26
DDX39A-221ENST00000593026 OR11A1Q9GZK7 315 aa13.41□□□□□ -0.26
DDX39A-221ENST00000593026 COQ10BQ9H8M1 238 aa13.41□□□□□ -0.26
DDX39A-221ENST00000593026 TIGARQ9NQ88 270 aa13.41□□□□□ -0.26
DDX39A-221ENST00000593026 COQ3Q9NZJ6 369 aa13.41□□□□□ -0.26
DDX39A-221ENST00000593026 SELENONQ9NZV5 590 aa13.41□□□□□ -0.26
DDX39A-221ENST00000593026 RPS6KA6Q9UK32 745 aa13.41□□□□□ -0.26
DDX39A-221ENST00000593026 PRPF19Q9UMS4 504 aaKnown RBP13.41□□□□□ -0.26
DDX39A-221ENST00000593026 ZNF175Q9Y473 711 aa13.41□□□□□ -0.26
DDX39A-221ENST00000593026 FLNCQ14315 2725 aa13.41□□□□□ -0.26
DDX39A-221ENST00000593026 MYO7BQ6PIF6 2116 aa13.4□□□□□ -0.26
DDX39A-221ENST00000593026 ARHGAP21Q5T5U3 1957 aa13.4□□□□□ -0.26
DDX39A-221ENST00000593026 ASH1LQ9NR48 2969 aaKnown RBP13.4□□□□□ -0.26
DDX39A-221ENST00000593026 A0A1W2PNR3 127 aa13.4□□□□□ -0.26
DDX39A-221ENST00000593026 TMEM72A0PK05 275 aa13.4□□□□□ -0.26
DDX39A-221ENST00000593026 ELOA3DA6NLF2 546 aaPredicted RBP13.4□□□□□ -0.26
DDX39A-221ENST00000593026 TMEM229AB2RXF0 380 aa13.4□□□□□ -0.26
DDX39A-221ENST00000593026 ARPC2O15144 300 aa13.4□□□□□ -0.26
DDX39A-221ENST00000593026 GYG2O15488 501 aa13.4□□□□□ -0.26
DDX39A-221ENST00000593026 ZNF208O43345 1280 aa13.4□□□□□ -0.26
DDX39A-221ENST00000593026 TPST2O60704 377 aa13.4□□□□□ -0.26
DDX39A-221ENST00000593026 TOXO94900 526 aa13.4□□□□□ -0.26
DDX39A-221ENST00000593026 IL2RAP01589 272 aa13.4□□□□□ -0.26
DDX39A-221ENST00000593026 FCGR2AP12318 317 aa13.4□□□□□ -0.26
DDX39A-221ENST00000593026 MSX2P35548 267 aaPredicted RBP13.4□□□□□ -0.26
DDX39A-221ENST00000593026 CLK1P49759 484 aaKnown RBP13.4□□□□□ -0.26
DDX39A-221ENST00000593026 BNIP1Q12981 228 aa13.4□□□□□ -0.26
DDX39A-221ENST00000593026 BNIP2Q12982 314 aa13.4□□□□□ -0.26
DDX39A-221ENST00000593026 FXNQ16595 210 aa13.4□□□□□ -0.26
DDX39A-221ENST00000593026 ELOA3BQ3SY89 546 aa13.4□□□□□ -0.26
DDX39A-221ENST00000593026 DNAL1Q4LDG9 190 aa13.4□□□□□ -0.26
DDX39A-221ENST00000593026 ALG10BQ5I7T1 473 aa13.4□□□□□ -0.26
DDX39A-221ENST00000593026 ULK3Q6PHR2 472 aa13.4□□□□□ -0.26
DDX39A-221ENST00000593026 CBLL1Q75N03 491 aa13.4□□□□□ -0.26
DDX39A-221ENST00000593026 MRGPRGQ86SM5 289 aa13.4□□□□□ -0.26
DDX39A-221ENST00000593026 ATG4DQ86TL0 474 aaPredicted RBP13.4□□□□□ -0.26
DDX39A-221ENST00000593026 RBM45Q8IUH3 476 aaKnown RBP13.4□□□□□ -0.26
DDX39A-221ENST00000593026 C9orf106Q8NAJ2 232 aa13.4□□□□□ -0.26
DDX39A-221ENST00000593026 ELOA3Q8NG57 546 aa13.4□□□□□ -0.26
DDX39A-221ENST00000593026 FNDC9Q8TBE3 224 aa13.4□□□□□ -0.26
DDX39A-221ENST00000593026 RNF217Q8TC41 542 aa13.4□□□□□ -0.26
DDX39A-221ENST00000593026 DNAJA4Q8WW22 397 aaPredicted RBP13.4□□□□□ -0.26
DDX39A-221ENST00000593026 CPNE4Q96A23 557 aaPredicted RBP13.4□□□□□ -0.26
DDX39A-221ENST00000593026 TM9SF2Q99805 663 aa13.4□□□□□ -0.26
DDX39A-221ENST00000593026 PRRG4Q9BZD6 226 aa13.4□□□□□ -0.26
DDX39A-221ENST00000593026 MCTS1Q9ULC4 181 aaKnown RBP13.4□□□□□ -0.26
DDX39A-221ENST00000593026 HDGFL3Q9Y3E1 203 aa13.4□□□□□ -0.26
DDX39A-221ENST00000593026 SNX13Q9Y5W8 968 aa13.4□□□□□ -0.26
DDX39A-221ENST00000593026 A0A0B4J2E0 115 aa13.39□□□□□ -0.27
DDX39A-221ENST00000593026 A0A0G2JNJ9 132 aa13.39□□□□□ -0.27
DDX39A-221ENST00000593026 A0A1B0GX12 115 aa13.39□□□□□ -0.27
DDX39A-221ENST00000593026 WIPF3A6NGB9 483 aa13.39□□□□□ -0.27
DDX39A-221ENST00000593026 CPSF4LA6NMK7 179 aaKnown RBP13.39□□□□□ -0.27
DDX39A-221ENST00000593026 HSPB2A8KAH6 182 aa13.39□□□□□ -0.27
DDX39A-221ENST00000593026 SULT2B1O00204 365 aa13.39□□□□□ -0.27
DDX39A-221ENST00000593026 PDE5AO76074 875 aa13.39□□□□□ -0.27
DDX39A-221ENST00000593026 TGM6O95932 706 aa13.39□□□□□ -0.27
DDX39A-221ENST00000593026 RNF224P0DH78 156 aa13.39□□□□□ -0.27
DDX39A-221ENST00000593026 PNMTP11086 282 aa13.39□□□□□ -0.27
DDX39A-221ENST00000593026 CEACAM8P31997 349 aaPredicted RBP13.39□□□□□ -0.27
DDX39A-221ENST00000593026 OR1E2P47887 323 aa13.39□□□□□ -0.27
DDX39A-221ENST00000593026 DIO1P49895 249 aa13.39□□□□□ -0.27
DDX39A-221ENST00000593026 CSNK2A1P68400 391 aaPredicted RBP13.39□□□□□ -0.27
DDX39A-221ENST00000593026 HSPB2Q16082 182 aa13.39□□□□□ -0.27
DDX39A-221ENST00000593026 ZNF239Q16600 458 aaKnown RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms