RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 EPS8Q12929 822 aa12.32□□□□□ -0.44
APOC1-208ENST00000592535 GNA13Q14344 377 aa12.32□□□□□ -0.44
APOC1-208ENST00000592535 BEX5Q5H9J7 111 aa12.32□□□□□ -0.44
APOC1-208ENST00000592535 ABLIM2Q6H8Q1 611 aa12.32□□□□□ -0.44
APOC1-208ENST00000592535 ZNF836Q6ZNA1 936 aa12.32□□□□□ -0.44
APOC1-208ENST00000592535 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.32□□□□□ -0.44
APOC1-208ENST00000592535 WFDC8Q8IUA0 241 aa12.32□□□□□ -0.44
APOC1-208ENST00000592535 FUNDC1Q8IVP5 155 aa12.32□□□□□ -0.44
APOC1-208ENST00000592535 PEX5LQ8IYB4 626 aa12.32□□□□□ -0.44
APOC1-208ENST00000592535 OR52P1PQ8NH57 321 aa12.32□□□□□ -0.44
APOC1-208ENST00000592535 SLC38A5Q8WUX1 472 aa12.32□□□□□ -0.44
APOC1-208ENST00000592535 PMM1Q92871 262 aa12.32□□□□□ -0.44
APOC1-208ENST00000592535 S100PBPQ96BU1 408 aa12.32□□□□□ -0.44
APOC1-208ENST00000592535 TMEM19Q96HH6 336 aa12.32□□□□□ -0.44
APOC1-208ENST00000592535 CCDC28BQ9BUN5 200 aa12.32□□□□□ -0.44
APOC1-208ENST00000592535 OR10A4Q9H209 315 aa12.32□□□□□ -0.44
APOC1-208ENST00000592535 UBTD1Q9HAC8 227 aa12.32□□□□□ -0.44
APOC1-208ENST00000592535 RLIMQ9NVW2 624 aa12.32□□□□□ -0.44
APOC1-208ENST00000592535 CALML5Q9NZT1 146 aa12.32□□□□□ -0.44
APOC1-208ENST00000592535 PRSS50Q9UI38 385 aa12.32□□□□□ -0.44
APOC1-208ENST00000592535 OSGIN1Q9UJX0 560 aa12.32□□□□□ -0.44
APOC1-208ENST00000592535 PCDHB14Q9Y5E9 798 aa12.32□□□□□ -0.44
APOC1-208ENST00000592535 TMED7-TICAM2A0A0A6YYA0 188 aa12.31□□□□□ -0.44
APOC1-208ENST00000592535 TMEM72A0PK05 275 aa12.31□□□□□ -0.44
APOC1-208ENST00000592535 CFAP73A6NFT4 308 aa12.31□□□□□ -0.44
APOC1-208ENST00000592535 ZNF724A8MTY0 619 aa12.31□□□□□ -0.44
APOC1-208ENST00000592535 HMGB1P1B2RPK0 211 aaPredicted RBP12.31□□□□□ -0.44
APOC1-208ENST00000592535 ZNF814B7Z6K7 855 aa12.31□□□□□ -0.44
APOC1-208ENST00000592535 FAAHO00519 579 aa12.31□□□□□ -0.44
APOC1-208ENST00000592535 PMS2P2O95744 297 aa12.31□□□□□ -0.44
APOC1-208ENST00000592535 ADAP00813 363 aa12.31□□□□□ -0.44
APOC1-208ENST00000592535 NUDT7P0C024 238 aa12.31□□□□□ -0.44
APOC1-208ENST00000592535 GKN3PP0CG01 181 aa12.31□□□□□ -0.44
APOC1-208ENST00000592535 CD99P14209 185 aa12.31□□□□□ -0.44
APOC1-208ENST00000592535 TACR3P29371 465 aa12.31□□□□□ -0.44
APOC1-208ENST00000592535 HTR3AP46098 478 aa12.31□□□□□ -0.44
APOC1-208ENST00000592535 OR3A2P47893 321 aa12.31□□□□□ -0.44
APOC1-208ENST00000592535 POLR2HP52434 150 aaKnown RBP12.31□□□□□ -0.44
APOC1-208ENST00000592535 PPP2R2AP63151 447 aa12.31□□□□□ -0.44
APOC1-208ENST00000592535 ADAM8P78325 824 aa12.31□□□□□ -0.44
APOC1-208ENST00000592535 RGNQ15493 299 aa12.31□□□□□ -0.44
APOC1-208ENST00000592535 ACKR1Q16570 336 aa12.31□□□□□ -0.44
APOC1-208ENST00000592535 LIN52Q52LA3 116 aa12.31□□□□□ -0.44
APOC1-208ENST00000592535 SFRP5Q5T4F7 317 aa12.31□□□□□ -0.44
APOC1-208ENST00000592535 MTDHQ86UE4 582 aaKnown RBP12.31□□□□□ -0.44
APOC1-208ENST00000592535 GOLGA6L1Q8N7Z2 621 aa12.31□□□□□ -0.44
APOC1-208ENST00000592535 STEAP2Q8NFT2 490 aa12.31□□□□□ -0.44
APOC1-208ENST00000592535 INTS9Q9NV88 658 aaKnown RBP12.31□□□□□ -0.44
APOC1-208ENST00000592535 BEX4Q9NWD9 120 aaPredicted RBP12.31□□□□□ -0.44
APOC1-208ENST00000592535 ZNF443Q9Y2A4 671 aaPredicted RBP12.31□□□□□ -0.44
APOC1-208ENST00000592535 TMED7Q9Y3B3 224 aa12.31□□□□□ -0.44
APOC1-208ENST00000592535 HDGFL3Q9Y3E1 203 aa12.31□□□□□ -0.44
APOC1-208ENST00000592535 A0A096LPI6 279 aa12.3□□□□□ -0.44
APOC1-208ENST00000592535 CDHR4A6H8M9 788 aa12.3□□□□□ -0.44
APOC1-208ENST00000592535 ZNF716A6NP11 495 aa12.3□□□□□ -0.44
APOC1-208ENST00000592535 CLIC1O00299 241 aa12.3□□□□□ -0.44
APOC1-208ENST00000592535 NR5A2O00482 541 aa12.3□□□□□ -0.44
APOC1-208ENST00000592535 RAMP1O60894 148 aa12.3□□□□□ -0.44
APOC1-208ENST00000592535 IL32P24001 234 aa12.3□□□□□ -0.44
APOC1-208ENST00000592535 SLC1A3P43003 542 aa12.3□□□□□ -0.44
APOC1-208ENST00000592535 CLK1P49759 484 aaKnown RBP12.3□□□□□ -0.44
APOC1-208ENST00000592535 OR2B6P58173 313 aa12.3□□□□□ -0.44
APOC1-208ENST00000592535 FOXD4Q12950 439 aaPredicted RBP12.3□□□□□ -0.44
APOC1-208ENST00000592535 ALKBH2Q6NS38 261 aa12.3□□□□□ -0.44
APOC1-208ENST00000592535 BLOC1S3Q6QNY0 202 aa12.3□□□□□ -0.44
APOC1-208ENST00000592535 GALNT5Q7Z7M9 940 aa12.3□□□□□ -0.44
APOC1-208ENST00000592535 MSRB3Q8IXL7 192 aa12.3□□□□□ -0.44
APOC1-208ENST00000592535 ZNF440Q8IYI8 595 aa12.3□□□□□ -0.44
APOC1-208ENST00000592535 CLIP4Q8N3C7 705 aa12.3□□□□□ -0.44
APOC1-208ENST00000592535 MAL2Q969L2 176 aa12.3□□□□□ -0.44
APOC1-208ENST00000592535 ZHX1-C8orf76Q96EF9 292 aa12.3□□□□□ -0.44
APOC1-208ENST00000592535 PLPPR2Q96GM1 343 aa12.3□□□□□ -0.44
APOC1-208ENST00000592535 HDHD5Q9BXW7 423 aa12.3□□□□□ -0.44
APOC1-208ENST00000592535 SLC52A3Q9NQ40 469 aa12.3□□□□□ -0.44
APOC1-208ENST00000592535 SLC25A37Q9NYZ2 338 aa12.3□□□□□ -0.44
APOC1-208ENST00000592535 CCDC167Q9P0B6 97 aa12.3□□□□□ -0.44
APOC1-208ENST00000592535 SLAMF8Q9P0V8 285 aa12.3□□□□□ -0.44
APOC1-208ENST00000592535 CHST2Q9Y4C5 530 aa12.3□□□□□ -0.44
APOC1-208ENST00000592535 IGKV3D-15A0A087WSY6 115 aa12.29□□□□□ -0.44
APOC1-208ENST00000592535 A0A0G2JPF8 293 aa12.29□□□□□ -0.44
APOC1-208ENST00000592535 ZC3H12DA2A288 527 aaKnown RBP12.29□□□□□ -0.44
APOC1-208ENST00000592535 TMEM247A6NEH6 219 aa12.29□□□□□ -0.44
APOC1-208ENST00000592535 HNRNPCL2B2RXH8 293 aa12.29□□□□□ -0.44
APOC1-208ENST00000592535 HNRNPCL3B7ZW38 293 aa12.29□□□□□ -0.44
APOC1-208ENST00000592535 ZNF208O43345 1280 aa12.29□□□□□ -0.44
APOC1-208ENST00000592535 HNRNPCL1O60812 293 aaKnown RBP12.29□□□□□ -0.44
APOC1-208ENST00000592535 PLAUP00749 431 aa12.29□□□□□ -0.44
APOC1-208ENST00000592535 THBS1P07996 1170 aa12.29□□□□□ -0.44
APOC1-208ENST00000592535 HNRNPCL4P0DMR1 293 aa12.29□□□□□ -0.44
APOC1-208ENST00000592535 IMPDH2P12268 514 aa12.29□□□□□ -0.44
APOC1-208ENST00000592535 BMP2P12643 396 aa12.29□□□□□ -0.44
APOC1-208ENST00000592535 PRG2P13727 222 aa12.29□□□□□ -0.44
APOC1-208ENST00000592535 UQCRBP14927 111 aa12.29□□□□□ -0.44
APOC1-208ENST00000592535 FKBP2P26885 142 aaKnown RBP12.29□□□□□ -0.44
APOC1-208ENST00000592535 ACAA2P42765 397 aaKnown RBP12.29□□□□□ -0.44
APOC1-208ENST00000592535 ITGADQ13349 1161 aa12.29□□□□□ -0.44
APOC1-208ENST00000592535 P2RY6Q15077 328 aa12.29□□□□□ -0.44
APOC1-208ENST00000592535 PDK3Q15120 406 aa12.29□□□□□ -0.44
APOC1-208ENST00000592535 TAB1Q15750 504 aa12.29□□□□□ -0.44
APOC1-208ENST00000592535 PAGE3Q5JUK9 113 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms