RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 KLHL28Q9NXS3 571 aa24.25■■□□□ 1.47
SMAD4-213ENST00000591914 KLHL9Q9P2J3 617 aa24.25■■□□□ 1.47
SMAD4-213ENST00000591914 OSGIN1Q9UJX0 560 aa24.25■■□□□ 1.47
SMAD4-213ENST00000591914 ZNF232Q9UNY5 417 aa24.25■■□□□ 1.47
SMAD4-213ENST00000591914 HDGFL3Q9Y3E1 203 aa24.25■■□□□ 1.47
SMAD4-213ENST00000591914 CHST2Q9Y4C5 530 aa24.25■■□□□ 1.47
SMAD4-213ENST00000591914 ABCA4P78363 2273 aa24.24■■□□□ 1.47
SMAD4-213ENST00000591914 CASKO14936 926 aa24.24■■□□□ 1.47
SMAD4-213ENST00000591914 CYTIPO60759 359 aa24.24■■□□□ 1.47
SMAD4-213ENST00000591914 HRGP04196 525 aa24.24■■□□□ 1.47
SMAD4-213ENST00000591914 TFPIP10646 304 aa24.24■■□□□ 1.47
SMAD4-213ENST00000591914 KLK2P20151 261 aa24.24■■□□□ 1.47
SMAD4-213ENST00000591914 ACAA2P42765 397 aaKnown RBP24.24■■□□□ 1.47
SMAD4-213ENST00000591914 STAC2Q6ZMT1 411 aa24.24■■□□□ 1.47
SMAD4-213ENST00000591914 NUFIP2Q7Z417 695 aaKnown RBP24.24■■□□□ 1.47
SMAD4-213ENST00000591914 CLIP4Q8N3C7 705 aa24.24■■□□□ 1.47
SMAD4-213ENST00000591914 BBS10Q8TAM1 723 aa24.24■■□□□ 1.47
SMAD4-213ENST00000591914 ARL5BQ96KC2 179 aa24.24■■□□□ 1.47
SMAD4-213ENST00000591914 MED18Q9BUE0 208 aa24.24■■□□□ 1.47
SMAD4-213ENST00000591914 SPATA9Q9BWV2 254 aa24.24■■□□□ 1.47
SMAD4-213ENST00000591914 OR11A1Q9GZK7 315 aa24.24■■□□□ 1.47
SMAD4-213ENST00000591914 ADAM19Q9H013 955 aa24.24■■□□□ 1.47
SMAD4-213ENST00000591914 IKZF5Q9H5V7 419 aa24.24■■□□□ 1.47
SMAD4-213ENST00000591914 LEF1Q9UJU2 399 aaPredicted RBP24.24■■□□□ 1.47
SMAD4-213ENST00000591914 ITGB1BP2Q9UKP3 347 aa24.24■■□□□ 1.47
SMAD4-213ENST00000591914 IFT52Q9Y366 437 aa24.24■■□□□ 1.47
SMAD4-213ENST00000591914 TMED7-TICAM2A0A0A6YYA0 188 aa24.23■■□□□ 1.47
SMAD4-213ENST00000591914 PGM3O95394 542 aa24.23■■□□□ 1.47
SMAD4-213ENST00000591914 PMS2P2O95744 297 aa24.23■■□□□ 1.47
SMAD4-213ENST00000591914 FESP07332 822 aa24.23■■□□□ 1.47
SMAD4-213ENST00000591914 GKN3PP0CG01 181 aa24.23■■□□□ 1.47
SMAD4-213ENST00000591914 ARAFP10398 606 aa24.23■■□□□ 1.47
SMAD4-213ENST00000591914 GPX2P18283 190 aa24.23■■□□□ 1.47
SMAD4-213ENST00000591914 TACR3P29371 465 aa24.23■■□□□ 1.47
SMAD4-213ENST00000591914 MAP2K6P52564 334 aa24.23■■□□□ 1.47
SMAD4-213ENST00000591914 GCNT6Q5T4J0 391 aa24.23■■□□□ 1.47
SMAD4-213ENST00000591914 FBXW10Q5XX13 1052 aa24.23■■□□□ 1.47
SMAD4-213ENST00000591914 TFAP2EQ6VUC0 442 aa24.23■■□□□ 1.47
SMAD4-213ENST00000591914 DPP10Q8N608 796 aa24.23■■□□□ 1.47
SMAD4-213ENST00000591914 TSPEARQ8WU66 669 aa24.23■■□□□ 1.47
SMAD4-213ENST00000591914 TMEM120AQ9BXJ8 343 aa24.23■■□□□ 1.47
SMAD4-213ENST00000591914 KLHL4Q9C0H6 718 aa24.23■■□□□ 1.47
SMAD4-213ENST00000591914 CACYBPQ9HB71 228 aaKnown RBP24.23■■□□□ 1.47
SMAD4-213ENST00000591914 CORO2BQ9UQ03 480 aa24.23■■□□□ 1.47
SMAD4-213ENST00000591914 TMED7Q9Y3B3 224 aa24.23■■□□□ 1.47
SMAD4-213ENST00000591914 AKAP6Q13023 2319 aa24.23■■□□□ 1.47
SMAD4-213ENST00000591914 C5orf58C9J3I9 102 aa24.22■■□□□ 1.47
SMAD4-213ENST00000591914 ZNF208O43345 1280 aa24.22■■□□□ 1.47
SMAD4-213ENST00000591914 DNPH1O43598 174 aa24.22■■□□□ 1.47
SMAD4-213ENST00000591914 ETS2P15036 469 aa24.22■■□□□ 1.47
SMAD4-213ENST00000591914 RASGEF1BQ0VAM2 473 aa24.22■■□□□ 1.47
SMAD4-213ENST00000591914 TESK1Q15569 626 aa24.22■■□□□ 1.47
SMAD4-213ENST00000591914 ZNF311Q5JNZ3 666 aa24.22■■□□□ 1.47
SMAD4-213ENST00000591914 ABLIM2Q6H8Q1 611 aa24.22■■□□□ 1.47
SMAD4-213ENST00000591914 ZNF550Q7Z398 422 aa24.22■■□□□ 1.47
SMAD4-213ENST00000591914 MTDHQ86UE4 582 aaKnown RBP24.22■■□□□ 1.47
SMAD4-213ENST00000591914 CPPED1Q9BRF8 314 aaPredicted RBP24.22■■□□□ 1.47
SMAD4-213ENST00000591914 LIME1Q9H400 295 aa24.22■■□□□ 1.47
SMAD4-213ENST00000591914 ARMC7Q9H6L4 198 aa24.22■■□□□ 1.47
SMAD4-213ENST00000591914 FANCFQ9NPI8 374 aa24.22■■□□□ 1.47
SMAD4-213ENST00000591914 FGFR1OP2Q9NVK5 253 aa24.22■■□□□ 1.47
SMAD4-213ENST00000591914 ZNF226Q9NYT6 803 aa24.22■■□□□ 1.47
SMAD4-213ENST00000591914 NIPSNAP3AQ9UFN0 247 aaPredicted RBP24.22■■□□□ 1.47
SMAD4-213ENST00000591914 NDUFAF1Q9Y375 327 aa24.22■■□□□ 1.47
SMAD4-213ENST00000591914 CELSR1Q9NYQ6 3014 aa24.22■■□□□ 1.47
SMAD4-213ENST00000591914 CCNA2P20248 432 aa24.21■■□□□ 1.47
SMAD4-213ENST00000591914 C22orf34Q6ZV56 151 aa24.21■■□□□ 1.47
SMAD4-213ENST00000591914 RETREG3Q86VR2 466 aa24.21■■□□□ 1.47
SMAD4-213ENST00000591914 NFKBIDQ8NI38 313 aa24.21■■□□□ 1.47
SMAD4-213ENST00000591914 NINJ1Q92982 152 aa24.21■■□□□ 1.47
SMAD4-213ENST00000591914 DDIT4LQ96D03 193 aa24.21■■□□□ 1.47
SMAD4-213ENST00000591914 TMEM38AQ9H6F2 299 aa24.21■■□□□ 1.47
SMAD4-213ENST00000591914 ST6GALNAC2Q9UJ37 374 aa24.21■■□□□ 1.47
SMAD4-213ENST00000591914 TRAPPC4Q9Y296 219 aa24.21■■□□□ 1.47
SMAD4-213ENST00000591914 TMEM72A0PK05 275 aa24.2■■□□□ 1.46
SMAD4-213ENST00000591914 ZNF724A8MTY0 619 aa24.2■■□□□ 1.46
SMAD4-213ENST00000591914 EVPLLA8MZ36 301 aa24.2■■□□□ 1.46
SMAD4-213ENST00000591914 TROVE2P10155 538 aaKnown RBP eCLIP24.2■■□□□ 1.46
SMAD4-213ENST00000591914 PRG2P13727 222 aa24.2■■□□□ 1.46
SMAD4-213ENST00000591914 CRYGSP22914 178 aa24.2■■□□□ 1.46
SMAD4-213ENST00000591914 CDK6Q00534 326 aa24.2■■□□□ 1.46
SMAD4-213ENST00000591914 HSP90B2PQ58FF3 399 aa24.2■■□□□ 1.46
SMAD4-213ENST00000591914 RUNDC3AQ59EK9 446 aa24.2■■□□□ 1.46
SMAD4-213ENST00000591914 REEP3Q6NUK4 255 aa24.2■■□□□ 1.46
SMAD4-213ENST00000591914 DHDDSQ86SQ9 333 aa24.2■■□□□ 1.46
SMAD4-213ENST00000591914 GABRG1Q8N1C3 465 aa24.2■■□□□ 1.46
SMAD4-213ENST00000591914 SLC35B4Q969S0 331 aa24.2■■□□□ 1.46
SMAD4-213ENST00000591914 ZHX1-C8orf76Q96EF9 292 aa24.2■■□□□ 1.46
SMAD4-213ENST00000591914 PLEKHF2Q9H8W4 249 aa24.2■■□□□ 1.46
SMAD4-213ENST00000591914 MED4Q9NPJ6 270 aa24.2■■□□□ 1.46
SMAD4-213ENST00000591914 TMEM181Q9P2C4 612 aa24.2■■□□□ 1.46
SMAD4-213ENST00000591914 IGKV3D-15A0A087WSY6 115 aa24.19■■□□□ 1.46
SMAD4-213ENST00000591914 DEFB108AA8MXU0 73 aa24.19■■□□□ 1.46
SMAD4-213ENST00000591914 ANGPT2O15123 496 aa24.19■■□□□ 1.46
SMAD4-213ENST00000591914 SIAH2O43255 324 aa24.19■■□□□ 1.46
SMAD4-213ENST00000591914 PPP3CBP16298 524 aa24.19■■□□□ 1.46
SMAD4-213ENST00000591914 PSMB1P20618 241 aaKnown RBP24.19■■□□□ 1.46
SMAD4-213ENST00000591914 PDK3Q15120 406 aa24.19■■□□□ 1.46
SMAD4-213ENST00000591914 POU4F3Q15319 338 aa24.19■■□□□ 1.46
SMAD4-213ENST00000591914 ADRM1Q16186 407 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms