RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 FAM27D1Q5T7N8 215 aa13.48□□□□□ -0.25
RETREG3-208ENST00000589797 OR2I1PQ8NGU4 316 aa13.48□□□□□ -0.25
RETREG3-208ENST00000589797 FUZQ9BT04 418 aa13.48□□□□□ -0.25
RETREG3-208ENST00000589797 SYNPO2LQ9H987 977 aa13.48□□□□□ -0.25
RETREG3-208ENST00000589797 SLC35A3Q9Y2D2 325 aa13.48□□□□□ -0.25
RETREG3-208ENST00000589797 HSPB11Q9Y547 144 aa13.48□□□□□ -0.25
RETREG3-208ENST00000589797 SERINC4A6NH21 518 aa13.48□□□□□ -0.25
RETREG3-208ENST00000589797 PRKAR1BP31321 381 aa13.48□□□□□ -0.25
RETREG3-208ENST00000589797 SNRPD2P62316 118 aaKnown RBP13.48□□□□□ -0.25
RETREG3-208ENST00000589797 ARTNQ5T4W7 220 aa13.48□□□□□ -0.25
RETREG3-208ENST00000589797 DPY19L4Q7Z388 723 aa13.48□□□□□ -0.25
RETREG3-208ENST00000589797 GPALPP1Q8IXQ4 340 aa13.48□□□□□ -0.25
RETREG3-208ENST00000589797 DNAJA4Q8WW22 397 aaPredicted RBP13.48□□□□□ -0.25
RETREG3-208ENST00000589797 ITFG2Q969R8 447 aa13.48□□□□□ -0.25
RETREG3-208ENST00000589797 VWCEQ96DN2 955 aa13.48□□□□□ -0.25
RETREG3-208ENST00000589797 GABRPO00591 440 aa13.48□□□□□ -0.25
RETREG3-208ENST00000589797 MAP2K3P46734 347 aa13.48□□□□□ -0.25
RETREG3-208ENST00000589797 TSPAN5P62079 268 aa13.48□□□□□ -0.25
RETREG3-208ENST00000589797 DRAXINQ8NBI3 349 aaPredicted RBP13.48□□□□□ -0.25
RETREG3-208ENST00000589797 BEST4Q8NFU0 473 aa13.48□□□□□ -0.25
RETREG3-208ENST00000589797 NEK7Q8TDX7 302 aa13.48□□□□□ -0.25
RETREG3-208ENST00000589797 GHSRQ92847 366 aa13.48□□□□□ -0.25
RETREG3-208ENST00000589797 RANBP2P49792 3224 aaKnown RBP13.48□□□□□ -0.25
RETREG3-208ENST00000589797 IGKV1-8A0A0C4DH67 115 aa13.47□□□□□ -0.25
RETREG3-208ENST00000589797 ZNF264O43296 627 aa13.47□□□□□ -0.25
RETREG3-208ENST00000589797 HRO43593 1189 aa13.47□□□□□ -0.25
RETREG3-208ENST00000589797 TLX3O43711 291 aaPredicted RBP13.47□□□□□ -0.25
RETREG3-208ENST00000589797 FNTBP49356 437 aa13.47□□□□□ -0.25
RETREG3-208ENST00000589797 GDI2P50395 445 aaKnown RBP13.47□□□□□ -0.25
RETREG3-208ENST00000589797 ADAM8P78325 824 aa13.47□□□□□ -0.25
RETREG3-208ENST00000589797 CTF1Q16619 201 aa13.47□□□□□ -0.25
RETREG3-208ENST00000589797 PHC2Q8IXK0 858 aa13.47□□□□□ -0.25
RETREG3-208ENST00000589797 TRMT10AQ8TBZ6 339 aaKnown RBP13.47□□□□□ -0.25
RETREG3-208ENST00000589797 OMA1Q96E52 524 aa13.47□□□□□ -0.25
RETREG3-208ENST00000589797 NARS2Q96I59 477 aaKnown RBP13.47□□□□□ -0.25
RETREG3-208ENST00000589797 SYT4Q9H2B2 425 aa13.47□□□□□ -0.25
RETREG3-208ENST00000589797 DOCK4Q8N1I0 1966 aa13.47□□□□□ -0.25
RETREG3-208ENST00000589797 RGS9O75916 674 aaPredicted RBP13.47□□□□□ -0.25
RETREG3-208ENST00000589797 ZNF24P17028 368 aa13.47□□□□□ -0.25
RETREG3-208ENST00000589797 CTBP2P56545 445 aa13.47□□□□□ -0.25
RETREG3-208ENST00000589797 PCBP4P57723 403 aaKnown RBP13.47□□□□□ -0.25
RETREG3-208ENST00000589797 HSD11B2P80365 405 aa13.47□□□□□ -0.25
RETREG3-208ENST00000589797 EEF1A2Q05639 463 aaKnown RBP13.47□□□□□ -0.25
RETREG3-208ENST00000589797 MLLT11Q13015 90 aaPredicted RBP13.47□□□□□ -0.25
RETREG3-208ENST00000589797 RPL13AP3Q6NVV1 102 aa13.47□□□□□ -0.25
RETREG3-208ENST00000589797 ZNF595Q8IYB9 648 aa13.47□□□□□ -0.25
RETREG3-208ENST00000589797 LSM14AQ8ND56 463 aaKnown RBP13.47□□□□□ -0.25
RETREG3-208ENST00000589797 TMEM234Q8WY98 164 aa13.47□□□□□ -0.25
RETREG3-208ENST00000589797 PTGES2Q9H7Z7 377 aa13.47□□□□□ -0.25
RETREG3-208ENST00000589797 C20orf141Q9NUB4 165 aa13.47□□□□□ -0.25
RETREG3-208ENST00000589797 TAS2R10Q9NYW0 307 aa13.47□□□□□ -0.25
RETREG3-208ENST00000589797 ING1Q9UK53 422 aaPredicted RBP13.47□□□□□ -0.25
RETREG3-208ENST00000589797 PTRH2Q9Y3E5 179 aaKnown RBP13.47□□□□□ -0.25
RETREG3-208ENST00000589797 TLE3Q04726 772 aa13.47□□□□□ -0.25
RETREG3-208ENST00000589797 OR7E24Q6IFN5 339 aa13.47□□□□□ -0.25
RETREG3-208ENST00000589797 SLC35F2Q8IXU6 374 aa13.47□□□□□ -0.25
RETREG3-208ENST00000589797 CELF2-AS1Q8N7Q2 184 aa13.47□□□□□ -0.25
RETREG3-208ENST00000589797 TMEM99Q8N816 258 aa13.47□□□□□ -0.25
RETREG3-208ENST00000589797 OR5M1Q8NGP8 315 aa13.47□□□□□ -0.25
RETREG3-208ENST00000589797 OR2T4Q8NH00 348 aa13.47□□□□□ -0.25
RETREG3-208ENST00000589797 RHBDD1Q8TEB9 315 aa13.47□□□□□ -0.25
RETREG3-208ENST00000589797 RFT1Q96AA3 541 aa13.47□□□□□ -0.25
RETREG3-208ENST00000589797 NXPE2Q96DL1 559 aa13.47□□□□□ -0.25
RETREG3-208ENST00000589797 LAMA3Q16787 3333 aa13.46□□□□□ -0.25
RETREG3-208ENST00000589797 TRIM3O75382 744 aaPredicted RBP13.46□□□□□ -0.25
RETREG3-208ENST00000589797 SCRG1O75711 98 aa13.46□□□□□ -0.25
RETREG3-208ENST00000589797 CT62P0C5K7 136 aa13.46□□□□□ -0.25
RETREG3-208ENST00000589797 APEHP13798 732 aaKnown RBP13.46□□□□□ -0.25
RETREG3-208ENST00000589797 FZD2Q14332 565 aa13.46□□□□□ -0.25
RETREG3-208ENST00000589797 PRAMEF8Q5VWM4 474 aa13.46□□□□□ -0.25
RETREG3-208ENST00000589797 PRAMEF7Q5VXH5 474 aa13.46□□□□□ -0.25
RETREG3-208ENST00000589797 SLC25A25Q6KCM7 469 aa13.46□□□□□ -0.25
RETREG3-208ENST00000589797 CAMKMTQ7Z624 323 aa13.46□□□□□ -0.25
RETREG3-208ENST00000589797 CA13Q8N1Q1 262 aa13.46□□□□□ -0.25
RETREG3-208ENST00000589797 GOT1L1Q8NHS2 421 aaPredicted RBP13.46□□□□□ -0.25
RETREG3-208ENST00000589797 NPRL2Q8WTW4 380 aa13.46□□□□□ -0.25
RETREG3-208ENST00000589797 DIABLOQ9NR28 239 aa13.46□□□□□ -0.25
RETREG3-208ENST00000589797 IGHV5-51A0A0C4DH38 117 aa13.46□□□□□ -0.25
RETREG3-208ENST00000589797 HRKO00198 91 aa13.46□□□□□ -0.25
RETREG3-208ENST00000589797 SYT5O00445 386 aa13.46□□□□□ -0.25
RETREG3-208ENST00000589797 GZMMP51124 257 aa13.46□□□□□ -0.25
RETREG3-208ENST00000589797 SNTB2Q13425 540 aaKnown RBP13.46□□□□□ -0.25
RETREG3-208ENST00000589797 ZNF181Q2M3W8 571 aa13.46□□□□□ -0.25
RETREG3-208ENST00000589797 SLC6A19Q695T7 634 aa13.46□□□□□ -0.25
RETREG3-208ENST00000589797 TOR1AIP2Q8NFQ8 470 aa13.46□□□□□ -0.25
RETREG3-208ENST00000589797 OR13C5Q8NGS8 318 aa13.46□□□□□ -0.25
RETREG3-208ENST00000589797 OR5B2Q96R09 309 aa13.46□□□□□ -0.25
RETREG3-208ENST00000589797 GABARAPL3Q9BY60 117 aa13.46□□□□□ -0.25
RETREG3-208ENST00000589797 NXF5Q9H1B4 397 aaKnown RBP13.46□□□□□ -0.25
RETREG3-208ENST00000589797 EIF3KQ9UBQ5 218 aaKnown RBP13.46□□□□□ -0.25
RETREG3-208ENST00000589797 FBXL4Q9UKA2 621 aa13.46□□□□□ -0.25
RETREG3-208ENST00000589797 RNF215Q9Y6U7 377 aa13.46□□□□□ -0.25
RETREG3-208ENST00000589797 TRBV11-1A0A0K0K1C0 115 aa13.46□□□□□ -0.26
RETREG3-208ENST00000589797 CDHR4A6H8M9 788 aa13.46□□□□□ -0.26
RETREG3-208ENST00000589797 VSTM2BA6NLU5 285 aa13.46□□□□□ -0.26
RETREG3-208ENST00000589797 HCRTR1O43613 425 aa13.46□□□□□ -0.26
RETREG3-208ENST00000589797 SCG5P05408 212 aa13.46□□□□□ -0.26
RETREG3-208ENST00000589797 SNRPBP14678 240 aaKnown RBP13.46□□□□□ -0.26
RETREG3-208ENST00000589797 SDHBP21912 280 aa13.46□□□□□ -0.26
RETREG3-208ENST00000589797 EMDP50402 254 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms