RNA–Protein interactions for RNA: ENST00000588692.5

DDX39A-208, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,478 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-208ENST00000588692 PRAMEF7Q5VXH5 474 aa12.85□□□□□ -0.35
DDX39A-208ENST00000588692 ANKRD34AQ69YU3 496 aa12.85□□□□□ -0.35
DDX39A-208ENST00000588692 ABLIM2Q6H8Q1 611 aa12.85□□□□□ -0.35
DDX39A-208ENST00000588692 NUFIP2Q7Z417 695 aaKnown RBP12.85□□□□□ -0.35
DDX39A-208ENST00000588692 GABRG1Q8N1C3 465 aa12.85□□□□□ -0.35
DDX39A-208ENST00000588692 OR52P1PQ8NH57 321 aa12.85□□□□□ -0.35
DDX39A-208ENST00000588692 SLC38A5Q8WUX1 472 aa12.85□□□□□ -0.35
DDX39A-208ENST00000588692 STON2Q8WXE9 905 aa12.85□□□□□ -0.35
DDX39A-208ENST00000588692 AURKBQ96GD4 344 aaPredicted RBP12.85□□□□□ -0.35
DDX39A-208ENST00000588692 USB1Q9BQ65 265 aaKnown RBP12.85□□□□□ -0.35
DDX39A-208ENST00000588692 ACTR6Q9GZN1 396 aa12.85□□□□□ -0.35
DDX39A-208ENST00000588692 PAIP1Q9H074 479 aaKnown RBP12.85□□□□□ -0.35
DDX39A-208ENST00000588692 EMC3Q9P0I2 261 aa12.85□□□□□ -0.35
DDX39A-208ENST00000588692 ING1Q9UK53 422 aaPredicted RBP12.85□□□□□ -0.35
DDX39A-208ENST00000588692 PCDHB14Q9Y5E9 798 aa12.85□□□□□ -0.35
DDX39A-208ENST00000588692 A0A096LPI6 279 aa12.84□□□□□ -0.35
DDX39A-208ENST00000588692 A0A0G2JPF8 293 aa12.84□□□□□ -0.35
DDX39A-208ENST00000588692 CDHR4A6H8M9 788 aa12.84□□□□□ -0.35
DDX39A-208ENST00000588692 HNRNPCL2B2RXH8 293 aa12.84□□□□□ -0.35
DDX39A-208ENST00000588692 HNRNPCL3B7ZW38 293 aa12.84□□□□□ -0.35
DDX39A-208ENST00000588692 AP3D1O14617 1153 aa12.84□□□□□ -0.35
DDX39A-208ENST00000588692 ZNF208O43345 1280 aa12.84□□□□□ -0.35
DDX39A-208ENST00000588692 HNRNPCL1O60812 293 aaKnown RBP12.84□□□□□ -0.35
DDX39A-208ENST00000588692 GCM2O75603 506 aaPredicted RBP12.84□□□□□ -0.35
DDX39A-208ENST00000588692 THBDP07204 575 aa12.84□□□□□ -0.35
DDX39A-208ENST00000588692 HNRNPCL4P0DMR1 293 aa12.84□□□□□ -0.35
DDX39A-208ENST00000588692 BMP2P12643 396 aa12.84□□□□□ -0.35
DDX39A-208ENST00000588692 HOXB9P17482 250 aaPredicted RBP12.84□□□□□ -0.35
DDX39A-208ENST00000588692 OR3A2P47893 321 aa12.84□□□□□ -0.35
DDX39A-208ENST00000588692 ATP4BP51164 291 aa12.84□□□□□ -0.35
DDX39A-208ENST00000588692 NR1H2P55055 460 aa12.84□□□□□ -0.35
DDX39A-208ENST00000588692 LARS2Q15031 903 aaKnown RBP12.84□□□□□ -0.35
DDX39A-208ENST00000588692 PDK3Q15120 406 aa12.84□□□□□ -0.35
DDX39A-208ENST00000588692 RGNQ15493 299 aa12.84□□□□□ -0.35
DDX39A-208ENST00000588692 LRIF1Q5T3J3 769 aa12.84□□□□□ -0.35
DDX39A-208ENST00000588692 RNF220Q5VTB9 566 aa12.84□□□□□ -0.35
DDX39A-208ENST00000588692 SLC2A7Q6PXP3 512 aa12.84□□□□□ -0.35
DDX39A-208ENST00000588692 BLOC1S3Q6QNY0 202 aa12.84□□□□□ -0.35
DDX39A-208ENST00000588692 C22orf34Q6ZV56 151 aa12.84□□□□□ -0.35
DDX39A-208ENST00000588692 MTDHQ86UE4 582 aaKnown RBP12.84□□□□□ -0.35
DDX39A-208ENST00000588692 ADGRG3Q86Y34 549 aa12.84□□□□□ -0.35
DDX39A-208ENST00000588692 CKAP2Q8WWK9 683 aa12.84□□□□□ -0.35
DDX39A-208ENST00000588692 DDIT4LQ96D03 193 aa12.84□□□□□ -0.35
DDX39A-208ENST00000588692 TMEM19Q96HH6 336 aa12.84□□□□□ -0.35
DDX39A-208ENST00000588692 ARMC7Q9H6L4 198 aa12.84□□□□□ -0.35
DDX39A-208ENST00000588692 BEX4Q9NWD9 120 aaPredicted RBP12.84□□□□□ -0.35
DDX39A-208ENST00000588692 TRAPPC4Q9Y296 219 aa12.84□□□□□ -0.35
DDX39A-208ENST00000588692 MAP1AP78559 2803 aaPredicted RBP12.84□□□□□ -0.35
DDX39A-208ENST00000588692 FREM1Q5H8C1 2179 aa12.84□□□□□ -0.35
DDX39A-208ENST00000588692 IGKV3D-15A0A087WSY6 115 aa12.83□□□□□ -0.36
DDX39A-208ENST00000588692 TMED7-TICAM2A0A0A6YYA0 188 aa12.83□□□□□ -0.36
DDX39A-208ENST00000588692 CLIC1O00299 241 aa12.83□□□□□ -0.36
DDX39A-208ENST00000588692 CNOT4O95628 575 aaKnown RBP12.83□□□□□ -0.36
DDX39A-208ENST00000588692 CD53P19397 219 aa12.83□□□□□ -0.36
DDX39A-208ENST00000588692 PPIBP23284 216 aaKnown RBP12.83□□□□□ -0.36
DDX39A-208ENST00000588692 LOXP28300 417 aaPredicted RBP12.83□□□□□ -0.36
DDX39A-208ENST00000588692 SFRP5Q5T4F7 317 aa12.83□□□□□ -0.36
DDX39A-208ENST00000588692 ZNF836Q6ZNA1 936 aa12.83□□□□□ -0.36
DDX39A-208ENST00000588692 Q6ZT83 130 aa12.83□□□□□ -0.36
DDX39A-208ENST00000588692 GALNT5Q7Z7M9 940 aa12.83□□□□□ -0.36
DDX39A-208ENST00000588692 CXorf67Q86X51 503 aaPredicted RBP12.83□□□□□ -0.36
DDX39A-208ENST00000588692 TGIF2LYQ8IUE0 185 aa12.83□□□□□ -0.36
DDX39A-208ENST00000588692 FUNDC1Q8IVP5 155 aa12.83□□□□□ -0.36
DDX39A-208ENST00000588692 PIGXQ8TBF5 258 aa12.83□□□□□ -0.36
DDX39A-208ENST00000588692 SPDL1Q96EA4 605 aa12.83□□□□□ -0.36
DDX39A-208ENST00000588692 ARL5BQ96KC2 179 aa12.83□□□□□ -0.36
DDX39A-208ENST00000588692 MAGEB18Q96M61 343 aa12.83□□□□□ -0.36
DDX39A-208ENST00000588692 RABEP2Q9H5N1 569 aa12.83□□□□□ -0.36
DDX39A-208ENST00000588692 BCL2L10Q9HD36 194 aa12.83□□□□□ -0.36
DDX39A-208ENST00000588692 A4GALTQ9NPC4 353 aa12.83□□□□□ -0.36
DDX39A-208ENST00000588692 CCDC167Q9P0B6 97 aa12.83□□□□□ -0.36
DDX39A-208ENST00000588692 TMEM181Q9P2C4 612 aa12.83□□□□□ -0.36
DDX39A-208ENST00000588692 OSGIN1Q9UJX0 560 aa12.83□□□□□ -0.36
DDX39A-208ENST00000588692 ZNF232Q9UNY5 417 aa12.83□□□□□ -0.36
DDX39A-208ENST00000588692 ZNF443Q9Y2A4 671 aaPredicted RBP12.83□□□□□ -0.36
DDX39A-208ENST00000588692 IFT52Q9Y366 437 aa12.83□□□□□ -0.36
DDX39A-208ENST00000588692 TMED7Q9Y3B3 224 aa12.83□□□□□ -0.36
DDX39A-208ENST00000588692 RAI1Q7Z5J4 1906 aaPredicted RBP12.82□□□□□ -0.36
DDX39A-208ENST00000588692 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.82□□□□□ -0.36
DDX39A-208ENST00000588692 NR5A2O00482 541 aa12.82□□□□□ -0.36
DDX39A-208ENST00000588692 GPR171O14626 319 aa12.82□□□□□ -0.36
DDX39A-208ENST00000588692 EIF1BO60739 113 aaKnown RBP12.82□□□□□ -0.36
DDX39A-208ENST00000588692 FPR1P21462 350 aa12.82□□□□□ -0.36
DDX39A-208ENST00000588692 IL32P24001 234 aa12.82□□□□□ -0.36
DDX39A-208ENST00000588692 TACR3P29371 465 aa12.82□□□□□ -0.36
DDX39A-208ENST00000588692 ITGADQ13349 1161 aa12.82□□□□□ -0.36
DDX39A-208ENST00000588692 SQLEQ14534 574 aa12.82□□□□□ -0.36
DDX39A-208ENST00000588692 C20orf204Q6ZNR8 217 aa12.82□□□□□ -0.36
DDX39A-208ENST00000588692 VRK2Q86Y07 508 aa12.82□□□□□ -0.36
DDX39A-208ENST00000588692 KISS1RQ969F8 398 aaPredicted RBP12.82□□□□□ -0.36
DDX39A-208ENST00000588692 PIGTQ969N2 578 aa12.82□□□□□ -0.36
DDX39A-208ENST00000588692 S100PBPQ96BU1 408 aa12.82□□□□□ -0.36
DDX39A-208ENST00000588692 ZNF300Q96RE9 604 aaPredicted RBP12.82□□□□□ -0.36
DDX39A-208ENST00000588692 PIP5K1AQ99755 562 aa12.82□□□□□ -0.36
DDX39A-208ENST00000588692 SIKE1Q9BRV8 207 aa12.82□□□□□ -0.36
DDX39A-208ENST00000588692 SPATA9Q9BWV2 254 aa12.82□□□□□ -0.36
DDX39A-208ENST00000588692 OR11A1Q9GZK7 315 aa12.82□□□□□ -0.36
DDX39A-208ENST00000588692 RLIMQ9NVW2 624 aa12.82□□□□□ -0.36
DDX39A-208ENST00000588692 GMEB1Q9Y692 573 aa12.82□□□□□ -0.36
DDX39A-208ENST00000588692 TMEM72A0PK05 275 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms