RNA–Protein interactions for RNA: ENST00000588507.5

TPM4-210, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-210ENST00000588507 TUBA1BP68363 451 aa5.68□□□□□ -1.5
TPM4-210ENST00000588507 TUBA4AP68366 448 aa5.68□□□□□ -1.5
TPM4-210ENST00000588507 ZNF763Q0D2J5 394 aa5.68□□□□□ -1.5
TPM4-210ENST00000588507 TMEM155Q4W5P6 130 aa5.68□□□□□ -1.5
TPM4-210ENST00000588507 TRMT12Q53H54 448 aaKnown RBP5.68□□□□□ -1.5
TPM4-210ENST00000588507 TCP11X2Q5H9J9 407 aa5.68□□□□□ -1.5
TPM4-210ENST00000588507 PAQR6Q6TCH4 344 aa5.68□□□□□ -1.5
TPM4-210ENST00000588507 CASP12Q6UXS9 341 aa5.68□□□□□ -1.5
TPM4-210ENST00000588507 NPSR1Q6W5P4 371 aa5.68□□□□□ -1.5
TPM4-210ENST00000588507 LINC00336Q6ZUF6 198 aa5.68□□□□□ -1.5
TPM4-210ENST00000588507 TUBA1AQ71U36 451 aa5.68□□□□□ -1.5
TPM4-210ENST00000588507 CALHM3Q86XJ0 350 aa5.68□□□□□ -1.5
TPM4-210ENST00000588507 MYO1HQ8N1T3 1032 aa5.68□□□□□ -1.5
TPM4-210ENST00000588507 Q8N1X5 172 aa5.68□□□□□ -1.5
TPM4-210ENST00000588507 ATP6V1C2Q8NEY4 427 aa5.68□□□□□ -1.5
TPM4-210ENST00000588507 OR4N2Q8NGD1 307 aa5.68□□□□□ -1.5
TPM4-210ENST00000588507 OR5R1Q8NH85 324 aa5.68□□□□□ -1.5
TPM4-210ENST00000588507 KIF18AQ8NI77 898 aa5.68□□□□□ -1.5
TPM4-210ENST00000588507 SNX33Q8WV41 574 aa5.68□□□□□ -1.5
TPM4-210ENST00000588507 EEF1AKMT1Q8WVE0 214 aa5.68□□□□□ -1.5
TPM4-210ENST00000588507 NUDT16L1Q9BRJ7 211 aaKnown RBP5.68□□□□□ -1.5
TPM4-210ENST00000588507 PCGF1Q9BSM1 259 aa5.68□□□□□ -1.5
TPM4-210ENST00000588507 SSBP3Q9BWW4 388 aaPredicted RBP5.68□□□□□ -1.5
TPM4-210ENST00000588507 MS4A8Q9BY19 250 aa5.68□□□□□ -1.5
TPM4-210ENST00000588507 CCDC68Q9H2F9 335 aa5.68□□□□□ -1.5
TPM4-210ENST00000588507 CHRAC1Q9NRG0 131 aa5.68□□□□□ -1.5
TPM4-210ENST00000588507 TAAR3PQ9P1P4 343 aa5.68□□□□□ -1.5
TPM4-210ENST00000588507 FZR1Q9UM11 496 aa5.68□□□□□ -1.5
TPM4-210ENST00000588507 OR10H1Q9Y4A9 318 aa5.68□□□□□ -1.5
TPM4-210ENST00000588507 ASB4Q9Y574 426 aa5.68□□□□□ -1.5
TPM4-210ENST00000588507 DSPPQ9NZW4 1301 aa5.68□□□□□ -1.5
TPM4-210ENST00000588507 IGHV1-69DA0A0B4J2H0 117 aa5.67□□□□□ -1.5
TPM4-210ENST00000588507 ZNF716A6NP11 495 aa5.67□□□□□ -1.5
TPM4-210ENST00000588507 KIF2AO00139 706 aaPredicted RBP5.67□□□□□ -1.5
TPM4-210ENST00000588507 NR5A2O00482 541 aa5.67□□□□□ -1.5
TPM4-210ENST00000588507 TGFB1P01137 390 aa5.67□□□□□ -1.5
TPM4-210ENST00000588507 IGHV1-69P01742 117 aa5.67□□□□□ -1.5
TPM4-210ENST00000588507 UROSP10746 265 aa5.67□□□□□ -1.5
TPM4-210ENST00000588507 ZNF14P17017 642 aaPredicted RBP5.67□□□□□ -1.5
TPM4-210ENST00000588507 RPS23P62266 143 aaKnown RBP5.67□□□□□ -1.5
TPM4-210ENST00000588507 CRADDP78560 199 aa5.67□□□□□ -1.5
TPM4-210ENST00000588507 PRR5P85299 388 aa5.67□□□□□ -1.5
TPM4-210ENST00000588507 CD83Q01151 205 aa5.67□□□□□ -1.5
TPM4-210ENST00000588507 TSPO2Q5TGU0 170 aa5.67□□□□□ -1.5
TPM4-210ENST00000588507 LRRC38Q5VT99 294 aa5.67□□□□□ -1.5
TPM4-210ENST00000588507 ABLIM2Q6H8Q1 611 aa5.67□□□□□ -1.5
TPM4-210ENST00000588507 PPP1R21Q6ZMI0 780 aa5.67□□□□□ -1.5
TPM4-210ENST00000588507 SLC44A2Q8IWA5 706 aaPredicted RBP5.67□□□□□ -1.5
TPM4-210ENST00000588507 OR1K1Q8NGR3 316 aa5.67□□□□□ -1.5
TPM4-210ENST00000588507 WIPF2Q8TF74 440 aaPredicted RBP5.67□□□□□ -1.5
TPM4-210ENST00000588507 CCDC126Q96EE4 140 aa5.67□□□□□ -1.5
TPM4-210ENST00000588507 ZNF317Q96PQ6 595 aaPredicted RBP5.67□□□□□ -1.5
TPM4-210ENST00000588507 DCLRE1CQ96SD1 692 aaKnown RBP5.67□□□□□ -1.5
TPM4-210ENST00000588507 LAT2Q9GZY6 243 aa5.67□□□□□ -1.5
TPM4-210ENST00000588507 TREX1Q9NSU2 369 aa5.67□□□□□ -1.5
TPM4-210ENST00000588507 PARPBPQ9NWS1 579 aa5.67□□□□□ -1.5
TPM4-210ENST00000588507 ZNRD1Q9P1U0 126 aa5.67□□□□□ -1.5
TPM4-210ENST00000588507 CTTNBP2NLQ9P2B4 639 aa5.67□□□□□ -1.5
TPM4-210ENST00000588507 TRIM33Q9UPN9 1127 aa5.67□□□□□ -1.5
TPM4-210ENST00000588507 AQP7P3A6NL99 342 aa5.66□□□□□ -1.5
TPM4-210ENST00000588507 GOLGA8KD6RF30 607 aa5.66□□□□□ -1.5
TPM4-210ENST00000588507 PRR23D1E9PI22 279 aaPredicted RBP5.66□□□□□ -1.5
TPM4-210ENST00000588507 GOLGA8TH3BQL2 631 aa5.66□□□□□ -1.5
TPM4-210ENST00000588507 BCAS2O75934 225 aaPredicted RBP5.66□□□□□ -1.5
TPM4-210ENST00000588507 UBOX5O94941 541 aa5.66□□□□□ -1.5
TPM4-210ENST00000588507 VAPBO95292 243 aa5.66□□□□□ -1.5
TPM4-210ENST00000588507 TPM2P07951 284 aa5.66□□□□□ -1.5
TPM4-210ENST00000588507 FBP1P09467 338 aa5.66□□□□□ -1.5
TPM4-210ENST00000588507 LINGO3P0C6S8 592 aa5.66□□□□□ -1.5
TPM4-210ENST00000588507 FAM58BPP0C7Q3 252 aa5.66□□□□□ -1.5
TPM4-210ENST00000588507 FRMD6-AS1P0C7T7 363 aa5.66□□□□□ -1.5
TPM4-210ENST00000588507 PRR23D2P0DMB1 279 aaPredicted RBP5.66□□□□□ -1.5
TPM4-210ENST00000588507 HOXB1P14653 301 aaPredicted RBP5.66□□□□□ -1.5
TPM4-210ENST00000588507 OGNP20774 298 aaKnown RBP5.66□□□□□ -1.5
TPM4-210ENST00000588507 MAKP20794 623 aa5.66□□□□□ -1.5
TPM4-210ENST00000588507 SLC6A2P23975 617 aa5.66□□□□□ -1.5
TPM4-210ENST00000588507 EPHA3P29320 983 aa5.66□□□□□ -1.5
TPM4-210ENST00000588507 ARR3P36575 388 aa5.66□□□□□ -1.5
TPM4-210ENST00000588507 ECI1P42126 302 aa5.66□□□□□ -1.5
TPM4-210ENST00000588507 ASMTP46597 345 aa5.66□□□□□ -1.5
TPM4-210ENST00000588507 RAP1GDS1P52306 607 aa5.66□□□□□ -1.5
TPM4-210ENST00000588507 SELENOVP59797 346 aa5.66□□□□□ -1.5
TPM4-210ENST00000588507 ROR2Q01974 943 aaKnown RBP5.66□□□□□ -1.5
TPM4-210ENST00000588507 FOXF1Q12946 379 aa5.66□□□□□ -1.5
TPM4-210ENST00000588507 NPRL3Q12980 569 aa5.66□□□□□ -1.5
TPM4-210ENST00000588507 CCNG2Q16589 344 aa5.66□□□□□ -1.5
TPM4-210ENST00000588507 TSTQ16762 297 aaKnown RBP5.66□□□□□ -1.5
TPM4-210ENST00000588507 PCID2Q5JVF3 399 aa5.66□□□□□ -1.5
TPM4-210ENST00000588507 FAM209AQ5JX71 171 aa5.66□□□□□ -1.5
TPM4-210ENST00000588507 GKAP1Q5VSY0 366 aaPredicted RBP5.66□□□□□ -1.5
TPM4-210ENST00000588507 KHDRBS2Q5VWX1 349 aaKnown RBP5.66□□□□□ -1.5
TPM4-210ENST00000588507 MRM1Q6IN84 353 aaKnown RBP5.66□□□□□ -1.5
TPM4-210ENST00000588507 APOOLQ6UXV4 268 aa5.66□□□□□ -1.5
TPM4-210ENST00000588507 ABHD12BQ7Z5M8 362 aaPredicted RBP5.66□□□□□ -1.5
TPM4-210ENST00000588507 LRRC28Q86X40 367 aaPredicted RBP5.66□□□□□ -1.5
TPM4-210ENST00000588507 MRPL41Q8IXM3 137 aaKnown RBP5.66□□□□□ -1.5
TPM4-210ENST00000588507 FITM2Q8N6M3 262 aa5.66□□□□□ -1.5
TPM4-210ENST00000588507 TMCO5AQ8N6Q1 288 aa5.66□□□□□ -1.5
TPM4-210ENST00000588507 MAGEE2Q8TD90 523 aaPredicted RBP5.66□□□□□ -1.5
TPM4-210ENST00000588507 ZNF473Q8WTR7 871 aaKnown RBP5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms