RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 METTL2AQ96IZ6 378 aaKnown RBP7.56□□□□□ -1.2
SDF2-204ENST00000587338 EGLN2Q96KS0 407 aa7.56□□□□□ -1.2
SDF2-204ENST00000587338 TEX37Q96LM6 180 aa7.56□□□□□ -1.2
SDF2-204ENST00000587338 RNF145Q96MT1 663 aa7.56□□□□□ -1.2
SDF2-204ENST00000587338 DHRS9Q9BPW9 319 aa7.56□□□□□ -1.2
SDF2-204ENST00000587338 USB1Q9BQ65 265 aaKnown RBP7.56□□□□□ -1.2
SDF2-204ENST00000587338 PRR14Q9BWN1 585 aa7.56□□□□□ -1.2
SDF2-204ENST00000587338 EFCAB1Q9HAE3 211 aa7.56□□□□□ -1.2
SDF2-204ENST00000587338 Q9N2J8 555 aa7.56□□□□□ -1.2
SDF2-204ENST00000587338 GIMAP4Q9NUV9 329 aa7.56□□□□□ -1.2
SDF2-204ENST00000587338 ASIC5Q9NY37 505 aa7.56□□□□□ -1.2
SDF2-204ENST00000587338 NPAP1Q9NZP6 1156 aa7.56□□□□□ -1.2
SDF2-204ENST00000587338 SH3BP4Q9P0V3 963 aa7.56□□□□□ -1.2
SDF2-204ENST00000587338 MCM8Q9UJA3 840 aa7.56□□□□□ -1.2
SDF2-204ENST00000587338 A0A087WZY1 265 aa7.55□□□□□ -1.2
SDF2-204ENST00000587338 IGLV3-32A0A0A0MS00 114 aa7.55□□□□□ -1.2
SDF2-204ENST00000587338 A0A1W2PRB8 838 aa7.55□□□□□ -1.2
SDF2-204ENST00000587338 ZNF814B7Z6K7 855 aa7.55□□□□□ -1.2
SDF2-204ENST00000587338 MRASO14807 208 aa7.55□□□□□ -1.2
SDF2-204ENST00000587338 IL33O95760 270 aa7.55□□□□□ -1.2
SDF2-204ENST00000587338 EGR1P18146 543 aa7.55□□□□□ -1.2
SDF2-204ENST00000587338 PRPS1L1P21108 318 aa7.55□□□□□ -1.2
SDF2-204ENST00000587338 IL12AP29459 219 aa7.55□□□□□ -1.2
SDF2-204ENST00000587338 S100A3P33764 101 aa7.55□□□□□ -1.2
SDF2-204ENST00000587338 SFTPDP35247 375 aa7.55□□□□□ -1.2
SDF2-204ENST00000587338 SRP14P37108 136 aaKnown RBP7.55□□□□□ -1.2
SDF2-204ENST00000587338 EFNA4P52798 201 aa7.55□□□□□ -1.2
SDF2-204ENST00000587338 CLNS1AP54105 237 aaKnown RBP7.55□□□□□ -1.2
SDF2-204ENST00000587338 TRA2BP62995 288 aaKnown RBP7.55□□□□□ -1.2
SDF2-204ENST00000587338 SLC25A3Q00325 362 aa7.55□□□□□ -1.2
SDF2-204ENST00000587338 CARTPTQ16568 116 aa7.55□□□□□ -1.2
SDF2-204ENST00000587338 PLPPR5Q32ZL2 321 aa7.55□□□□□ -1.2
SDF2-204ENST00000587338 TIGD2Q4W5G0 525 aa7.55□□□□□ -1.2
SDF2-204ENST00000587338 SPANXN4Q5MJ08 99 aa7.55□□□□□ -1.2
SDF2-204ENST00000587338 ANKRD26P1Q6NSI1 321 aa7.55□□□□□ -1.2
SDF2-204ENST00000587338 BLOC1S3Q6QNY0 202 aa7.55□□□□□ -1.2
SDF2-204ENST00000587338 APOOLQ6UXV4 268 aa7.55□□□□□ -1.2
SDF2-204ENST00000587338 SAMD14Q8IZD0 417 aaPredicted RBP7.55□□□□□ -1.2
SDF2-204ENST00000587338 LILRA2Q8N149 483 aa7.55□□□□□ -1.2
SDF2-204ENST00000587338 GATSQ8NAP1 163 aa7.55□□□□□ -1.2
SDF2-204ENST00000587338 PCYOX1LQ8NBM8 494 aa7.55□□□□□ -1.2
SDF2-204ENST00000587338 GLB1L3Q8NCI6 653 aaPredicted RBP7.55□□□□□ -1.2
SDF2-204ENST00000587338 MCUR1Q96AQ8 359 aa7.55□□□□□ -1.2
SDF2-204ENST00000587338 VPS33AQ96AX1 596 aa7.55□□□□□ -1.2
SDF2-204ENST00000587338 ZBTB8AQ96BR9 441 aa7.55□□□□□ -1.2
SDF2-204ENST00000587338 ZMYND19Q96E35 227 aaPredicted RBP7.55□□□□□ -1.2
SDF2-204ENST00000587338 RADILQ96JH8 1075 aa7.55□□□□□ -1.2
SDF2-204ENST00000587338 FCRL1Q96LA6 429 aa7.55□□□□□ -1.2
SDF2-204ENST00000587338 KLHL15Q96M94 604 aa7.55□□□□□ -1.2
SDF2-204ENST00000587338 PRPF18Q99633 342 aaKnown RBP7.55□□□□□ -1.2
SDF2-204ENST00000587338 BTBD10Q9BSF8 475 aa7.55□□□□□ -1.2
SDF2-204ENST00000587338 PIMREGQ9BSJ6 248 aa7.55□□□□□ -1.2
SDF2-204ENST00000587338 SRXN1Q9BYN0 137 aa7.55□□□□□ -1.2
SDF2-204ENST00000587338 MIEF1Q9NQG6 463 aa7.55□□□□□ -1.2
SDF2-204ENST00000587338 MED17Q9NVC6 651 aa7.55□□□□□ -1.2
SDF2-204ENST00000587338 LEF1Q9UJU2 399 aaPredicted RBP7.55□□□□□ -1.2
SDF2-204ENST00000587338 MRTO4Q9UKD2 239 aaKnown RBP7.55□□□□□ -1.2
SDF2-204ENST00000587338 IGHV4-61A0A0C4DH41 118 aa7.54□□□□□ -1.2
SDF2-204ENST00000587338 BBIP1A8MTZ0 92 aa7.54□□□□□ -1.2
SDF2-204ENST00000587338 ANKRD28O15084 1053 aa7.54□□□□□ -1.2
SDF2-204ENST00000587338 SCAMP2O15127 329 aaKnown RBP7.54□□□□□ -1.2
SDF2-204ENST00000587338 ANP32DO95626 131 aa7.54□□□□□ -1.2
SDF2-204ENST00000587338 CPSF4O95639 269 aaKnown RBP7.54□□□□□ -1.2
SDF2-204ENST00000587338 IL6P05231 212 aa7.54□□□□□ -1.2
SDF2-204ENST00000587338 YES1P07947 543 aa7.54□□□□□ -1.2
SDF2-204ENST00000587338 KRT16P08779 473 aa7.54□□□□□ -1.2
SDF2-204ENST00000587338 BMP4P12644 408 aa7.54□□□□□ -1.2
SDF2-204ENST00000587338 GGT1P19440 569 aa7.54□□□□□ -1.2
SDF2-204ENST00000587338 PSMA4P25789 261 aaKnown RBP7.54□□□□□ -1.2
SDF2-204ENST00000587338 SHC1P29353 583 aa7.54□□□□□ -1.2
SDF2-204ENST00000587338 RPL3P39023 403 aaKnown RBP7.54□□□□□ -1.2
SDF2-204ENST00000587338 NR4A2P43354 598 aa7.54□□□□□ -1.2
SDF2-204ENST00000587338 MRPL19P49406 292 aaKnown RBP7.54□□□□□ -1.2
SDF2-204ENST00000587338 PDLIM4P50479 330 aa7.54□□□□□ -1.2
SDF2-204ENST00000587338 ZNF83P51522 516 aa7.54□□□□□ -1.2
SDF2-204ENST00000587338 PSMD4P55036 377 aaKnown RBP7.54□□□□□ -1.2
SDF2-204ENST00000587338 ACTG1P63261 375 aa7.54□□□□□ -1.2
SDF2-204ENST00000587338 PRR5P85299 388 aa7.54□□□□□ -1.2
SDF2-204ENST00000587338 NFYCQ13952 458 aa7.54□□□□□ -1.2
SDF2-204ENST00000587338 ZNHIT3Q15649 155 aaPredicted RBP7.54□□□□□ -1.2
SDF2-204ENST00000587338 GRAMD1BQ3KR37 738 aa7.54□□□□□ -1.2
SDF2-204ENST00000587338 IQCCQ4KMZ1 466 aa7.54□□□□□ -1.2
SDF2-204ENST00000587338 DNAL1Q4LDG9 190 aa7.54□□□□□ -1.2
SDF2-204ENST00000587338 TIMM23BQ5SRD1 257 aa7.54□□□□□ -1.2
SDF2-204ENST00000587338 C6orf10Q5SRN2 563 aa7.54□□□□□ -1.2
SDF2-204ENST00000587338 CPTPQ5TA50 214 aa7.54□□□□□ -1.2
SDF2-204ENST00000587338 GALNT18Q6P9A2 607 aa7.54□□□□□ -1.2
SDF2-204ENST00000587338 SLC2A7Q6PXP3 512 aa7.54□□□□□ -1.2
SDF2-204ENST00000587338 TMEM107Q6UX40 140 aa7.54□□□□□ -1.2
SDF2-204ENST00000587338 C16orf89Q6UX73 402 aa7.54□□□□□ -1.2
SDF2-204ENST00000587338 TMEM108Q6UXF1 575 aa7.54□□□□□ -1.2
SDF2-204ENST00000587338 B3GLCTQ6Y288 498 aa7.54□□□□□ -1.2
SDF2-204ENST00000587338 Q6ZT83 130 aa7.54□□□□□ -1.2
SDF2-204ENST00000587338 FCRLAQ7L513 359 aa7.54□□□□□ -1.2
SDF2-204ENST00000587338 R3HCC1LQ7Z5L2 792 aaKnown RBP7.54□□□□□ -1.2
SDF2-204ENST00000587338 DEPDC4Q8N2C3 294 aa7.54□□□□□ -1.2
SDF2-204ENST00000587338 C3orf56Q8N813 242 aa7.54□□□□□ -1.2
SDF2-204ENST00000587338 RBM15BQ8NDT2 890 aaKnown RBP7.54□□□□□ -1.2
SDF2-204ENST00000587338 OR7A2PQ8NGA2 310 aa7.54□□□□□ -1.2
SDF2-204ENST00000587338 SGMS2Q8NHU3 365 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms