RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 WDR88Q6ZMY6 472 aa14.8□□□□□ -0.04
CDK5RAP3-228ENST00000583363 TMEM251Q8N6I4 163 aa14.8□□□□□ -0.04
CDK5RAP3-228ENST00000583363 RNF217Q8TC41 542 aa14.8□□□□□ -0.04
CDK5RAP3-228ENST00000583363 SLC7A13Q8TCU3 470 aa14.8□□□□□ -0.04
CDK5RAP3-228ENST00000583363 HS6ST2Q96MM7 605 aa14.8□□□□□ -0.04
CDK5RAP3-228ENST00000583363 OR2B2Q9GZK3 357 aa14.8□□□□□ -0.04
CDK5RAP3-228ENST00000583363 ZNF703Q9H7S9 590 aaPredicted RBP14.8□□□□□ -0.04
CDK5RAP3-228ENST00000583363 QPCTLQ9NXS2 382 aa14.8□□□□□ -0.04
CDK5RAP3-228ENST00000583363 B4GALT7Q9UBV7 327 aa14.8□□□□□ -0.04
CDK5RAP3-228ENST00000583363 DKKL1Q9UK85 242 aa14.8□□□□□ -0.04
CDK5RAP3-228ENST00000583363 TMCC3Q9ULS5 477 aa14.8□□□□□ -0.04
CDK5RAP3-228ENST00000583363 A0A087WUU8 490 aa14.79□□□□□ -0.04
CDK5RAP3-228ENST00000583363 TMED7-TICAM2A0A0A6YYA0 188 aa14.79□□□□□ -0.04
CDK5RAP3-228ENST00000583363 SH3PXD2BA1X283 911 aa14.79□□□□□ -0.04
CDK5RAP3-228ENST00000583363 SHISA8B8ZZ34 492 aa14.79□□□□□ -0.04
CDK5RAP3-228ENST00000583363 EFNA2O43921 213 aa14.79□□□□□ -0.04
CDK5RAP3-228ENST00000583363 E2F6O75461 281 aa14.79□□□□□ -0.04
CDK5RAP3-228ENST00000583363 TRAPPC6AO75865 159 aa14.79□□□□□ -0.04
CDK5RAP3-228ENST00000583363 CXCR1P25024 350 aa14.79□□□□□ -0.04
CDK5RAP3-228ENST00000583363 GDF1P27539 372 aa14.79□□□□□ -0.04
CDK5RAP3-228ENST00000583363 FOXF1Q12946 379 aa14.79□□□□□ -0.04
CDK5RAP3-228ENST00000583363 TOMM20Q15388 145 aa14.79□□□□□ -0.04
CDK5RAP3-228ENST00000583363 SEC23BQ15437 767 aa14.79□□□□□ -0.04
CDK5RAP3-228ENST00000583363 MICAQ29983 383 aa14.79□□□□□ -0.04
CDK5RAP3-228ENST00000583363 RNFT1Q5M7Z0 435 aa14.79□□□□□ -0.04
CDK5RAP3-228ENST00000583363 TBPL2Q6SJ96 375 aa14.79□□□□□ -0.04
CDK5RAP3-228ENST00000583363 YRDCQ86U90 279 aaKnown RBP14.79□□□□□ -0.04
CDK5RAP3-228ENST00000583363 SLC22A16Q86VW1 577 aa14.79□□□□□ -0.04
CDK5RAP3-228ENST00000583363 RNF113BQ8IZP6 322 aaKnown RBP14.79□□□□□ -0.04
CDK5RAP3-228ENST00000583363 GTPBP8Q8N3Z3 284 aaPredicted RBP14.79□□□□□ -0.04
CDK5RAP3-228ENST00000583363 ICA1LQ8NDH6 482 aa14.79□□□□□ -0.04
CDK5RAP3-228ENST00000583363 FAM83FQ8NEG4 500 aaPredicted RBP14.79□□□□□ -0.04
CDK5RAP3-228ENST00000583363 OR5M1Q8NGP8 315 aa14.79□□□□□ -0.04
CDK5RAP3-228ENST00000583363 ACOT11Q8WXI4 607 aaPredicted RBP14.79□□□□□ -0.04
CDK5RAP3-228ENST00000583363 BARD1Q99728 777 aaKnown RBP14.79□□□□□ -0.04
CDK5RAP3-228ENST00000583363 ZNF426Q9BUY5 554 aa14.79□□□□□ -0.04
CDK5RAP3-228ENST00000583363 RPH3AQ9Y2J0 694 aaPredicted RBP14.79□□□□□ -0.04
CDK5RAP3-228ENST00000583363 TMED7Q9Y3B3 224 aa14.79□□□□□ -0.04
CDK5RAP3-228ENST00000583363 NBASA2RRP1 2371 aa14.78□□□□□ -0.04
CDK5RAP3-228ENST00000583363 TMEM72A0PK05 275 aa14.78□□□□□ -0.04
CDK5RAP3-228ENST00000583363 ELOA3DA6NLF2 546 aaPredicted RBP14.78□□□□□ -0.04
CDK5RAP3-228ENST00000583363 FAM166BA8MTA8 275 aa14.78□□□□□ -0.04
CDK5RAP3-228ENST00000583363 G3V2T6 193 aa14.78□□□□□ -0.04
CDK5RAP3-228ENST00000583363 CASQ2O14958 399 aaPredicted RBP14.78□□□□□ -0.04
CDK5RAP3-228ENST00000583363 CCNB2O95067 398 aa14.78□□□□□ -0.04
CDK5RAP3-228ENST00000583363 RASAL1O95294 804 aa14.78□□□□□ -0.04
CDK5RAP3-228ENST00000583363 RBM34P42696 430 aaKnown RBP14.78□□□□□ -0.04
CDK5RAP3-228ENST00000583363 ARHGDIAP52565 204 aa14.78□□□□□ -0.04
CDK5RAP3-228ENST00000583363 B3GALT5-AS1P59052 145 aa14.78□□□□□ -0.04
CDK5RAP3-228ENST00000583363 SLC10A1Q14973 349 aa14.78□□□□□ -0.04
CDK5RAP3-228ENST00000583363 ELOA3BQ3SY89 546 aa14.78□□□□□ -0.04
CDK5RAP3-228ENST00000583363 FGD3Q5JSP0 725 aa14.78□□□□□ -0.04
CDK5RAP3-228ENST00000583363 SLC6A19Q695T7 634 aa14.78□□□□□ -0.04
CDK5RAP3-228ENST00000583363 TTC33Q6PID6 262 aaPredicted RBP14.78□□□□□ -0.04
CDK5RAP3-228ENST00000583363 HIPK1Q86Z02 1210 aa14.78□□□□□ -0.04
CDK5RAP3-228ENST00000583363 SVOPLQ8N434 492 aa14.78□□□□□ -0.04
CDK5RAP3-228ENST00000583363 ELOA3Q8NG57 546 aa14.78□□□□□ -0.04
CDK5RAP3-228ENST00000583363 GIPC3Q8TF64 312 aa14.78□□□□□ -0.04
CDK5RAP3-228ENST00000583363 TMEM255BQ8WV15 326 aa14.78□□□□□ -0.04
CDK5RAP3-228ENST00000583363 TMEM239Q8WW34 195 aa14.78□□□□□ -0.04
CDK5RAP3-228ENST00000583363 ACKR4Q9NPB9 350 aa14.78□□□□□ -0.04
CDK5RAP3-228ENST00000583363 PDP1Q9P0J1 537 aaPredicted RBP14.78□□□□□ -0.04
CDK5RAP3-228ENST00000583363 OAZ3Q9UMX2 235 aa14.78□□□□□ -0.04
CDK5RAP3-228ENST00000583363 MAGED1Q9Y5V3 778 aaPredicted RBP14.78□□□□□ -0.04
CDK5RAP3-228ENST00000583363 FREM3P0C091 2139 aa14.78□□□□□ -0.04
CDK5RAP3-228ENST00000583363 IGKV1D-42A0A075B6H8 117 aa14.77□□□□□ -0.05
CDK5RAP3-228ENST00000583363 SAC3D1A6NKF1 404 aa14.77□□□□□ -0.05
CDK5RAP3-228ENST00000583363 ACOT7O00154 380 aa14.77□□□□□ -0.05
CDK5RAP3-228ENST00000583363 ZNF17P17021 662 aa14.77□□□□□ -0.05
CDK5RAP3-228ENST00000583363 ZNF23P17027 643 aa14.77□□□□□ -0.05
CDK5RAP3-228ENST00000583363 CCNA2P20248 432 aa14.77□□□□□ -0.05
CDK5RAP3-228ENST00000583363 PRKACGP22612 351 aa14.77□□□□□ -0.05
CDK5RAP3-228ENST00000583363 TCEA1P23193 301 aaKnown RBP14.77□□□□□ -0.05
CDK5RAP3-228ENST00000583363 MAGEA5P43359 124 aa14.77□□□□□ -0.05
CDK5RAP3-228ENST00000583363 MAP2K6P52564 334 aa14.77□□□□□ -0.05
CDK5RAP3-228ENST00000583363 UGT2B15P54855 530 aa14.77□□□□□ -0.05
CDK5RAP3-228ENST00000583363 LSM11P83369 360 aaKnown RBP eCLIP14.77□□□□□ -0.05
CDK5RAP3-228ENST00000583363 PMP22Q01453 160 aa14.77□□□□□ -0.05
CDK5RAP3-228ENST00000583363 LAPTM4AQ15012 233 aa14.77□□□□□ -0.05
CDK5RAP3-228ENST00000583363 NADK2Q4G0N4 442 aa14.77□□□□□ -0.05
CDK5RAP3-228ENST00000583363 WIPI1Q5MNZ9 446 aaPredicted RBP14.77□□□□□ -0.05
CDK5RAP3-228ENST00000583363 ZNF730Q6ZMV8 503 aa14.77□□□□□ -0.05
CDK5RAP3-228ENST00000583363 MBOAT2Q6ZWT7 520 aa14.77□□□□□ -0.05
CDK5RAP3-228ENST00000583363 LSRQ86X29 649 aaPredicted RBP14.77□□□□□ -0.05
CDK5RAP3-228ENST00000583363 ZDHHC13Q8IUH4 622 aa14.77□□□□□ -0.05
CDK5RAP3-228ENST00000583363 HS3ST5Q8IZT8 346 aa14.77□□□□□ -0.05
CDK5RAP3-228ENST00000583363 FAM109AQ8N4B1 249 aa14.77□□□□□ -0.05
CDK5RAP3-228ENST00000583363 LINC00471Q8N535 108 aa14.77□□□□□ -0.05
CDK5RAP3-228ENST00000583363 OR14L1PQ8NHC6 308 aa14.77□□□□□ -0.05
CDK5RAP3-228ENST00000583363 PNPLA2Q96AD5 504 aa14.77□□□□□ -0.05
CDK5RAP3-228ENST00000583363 TAAR6Q96RI8 345 aa14.77□□□□□ -0.05
CDK5RAP3-228ENST00000583363 PIGQQ9BRB3 760 aa14.77□□□□□ -0.05
CDK5RAP3-228ENST00000583363 TMEM43Q9BTV4 400 aa14.77□□□□□ -0.05
CDK5RAP3-228ENST00000583363 RASSF4Q9H2L5 321 aa14.77□□□□□ -0.05
CDK5RAP3-228ENST00000583363 ZDHHC11Q9H8X9 412 aa14.77□□□□□ -0.05
CDK5RAP3-228ENST00000583363 SERINC1Q9NRX5 453 aa14.77□□□□□ -0.05
CDK5RAP3-228ENST00000583363 STOML1Q9UBI4 398 aa14.77□□□□□ -0.05
CDK5RAP3-228ENST00000583363 LRRK2Q5S007 2527 aa14.77□□□□□ -0.05
CDK5RAP3-228ENST00000583363 NCKAP5O14513 1909 aa14.76□□□□□ -0.05
CDK5RAP3-228ENST00000583363 OR2M5A3KFT3 312 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms