RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 SLC2A3P11169 496 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 ZNF24P17028 368 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 CEBPBP17676 345 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 ELK4P28324 431 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 IL12AP29459 219 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 CCR1P32246 355 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 SOAT1P35610 550 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 OPRL1P41146 370 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 GZMMP51124 257 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 CLCN4P51793 760 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 GPR143P51810 404 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 LIMK1P53667 647 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 CRYBB1P53674 252 aaPredicted RBP3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 DIO3P55073 304 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 CDH11P55287 796 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 CDH13P55290 713 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 FOXA1P55317 472 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 SNU13P55769 128 aaKnown RBP3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 OR4D2P58180 307 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 IFITM3Q01628 133 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 GNA12Q03113 381 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 EMX1Q04741 257 aaPredicted RBP3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 IL10RBQ08334 325 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 CD47Q08722 323 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 SELENBP1Q13228 472 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 UBE2V1Q13404 147 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 AQP6Q13520 282 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 VGLL4Q14135 290 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 SELPLGQ14242 412 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 CAPRIN1Q14444 709 aaKnown RBP3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 IHHQ14623 411 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 SPCS2Q15005 226 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 OR4D1Q15615 310 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 KCNJ8Q15842 424 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 NEDD8Q15843 81 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 PHKG1Q16816 387 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 MEP1AQ16819 746 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 TRIM16LQ309B1 348 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 SLC39A12Q504Y0 691 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 SOWAHCQ53LP3 525 aaPredicted RBP3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 MARC1Q5VT66 337 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 MLIPQ5VWP3 458 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 RPS27LQ71UM5 84 aaKnown RBP3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 ITIH5Q86UX2 942 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 CALHM3Q86XJ0 350 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 HIPK1Q86Z02 1210 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 FBXO16Q8IX29 292 aaPredicted RBP3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 CPNE9Q8IYJ1 553 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 ZNF683Q8IZ20 524 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 OFCC1Q8IZS5 231 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 ELMOD1Q8N336 334 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 HDDC3Q8N4P3 179 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 DNAJC22Q8N4W6 341 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 ATPAF2Q8N5M1 289 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 ATP6V0D2Q8N8Y2 350 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 TMEM178AQ8NBL3 297 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 ZNF555Q8NEP9 628 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 BPIFB6Q8NFQ5 453 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 OR56A4Q8NGH8 313 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 OR4L1Q8NH43 312 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 ITFG1Q8TB96 612 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 DYNC2LI1Q8TCX1 351 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 STARD8Q92502 1023 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 TAMM41Q96BW9 452 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 SMARCD1Q96GM5 515 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 PCED1BQ96HM7 432 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 CDKN2AIPNLQ96HQ2 116 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 CELF6Q96J87 481 aaKnown RBP3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 TEX37Q96LM6 180 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 RNF145Q96MT1 663 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 MBOAT4Q96T53 435 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 PKMYT1Q99640 499 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 SH3GL1Q99961 368 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 MED10Q9BTT4 135 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 CACNG6Q9BXT2 260 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 NXF2Q9GZY0 626 aaKnown RBP3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 ING2Q9H160 280 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 NXF3Q9H4D5 531 aaKnown RBP3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 ATP13A3Q9H7F0 1226 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 IL1RL2Q9HB29 575 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 TMEM165Q9HC07 324 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 TRPV5Q9NQA5 729 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 RGS18Q9NS28 235 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 DCAF13Q9NV06 445 aaKnown RBP3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 NLE1Q9NVX2 485 aaPredicted RBP3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 CNIH4Q9P003 139 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 COX16Q9P0S2 106 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 SPATA7Q9P0W8 599 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 GALPQ9UBC7 116 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 TRPC4Q9UBN4 977 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 DAPK2Q9UIK4 370 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 C3orf18Q9UK00 162 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 ZNF225Q9UK10 706 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 ABT1Q9ULW3 272 aaKnown RBP3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 TPRKBQ9Y3C4 175 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 FIS1Q9Y3D6 152 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 SNX10Q9Y5X0 201 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 CITO14578 2027 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 SCN1AP35498 2009 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 GOLGB1Q14789 3259 aaKnown RBP3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms