RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-222	ENST00000581708	BEX4	Q9NWD9	120 aa	Predicted RBP	11.21	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	IFT52	Q9Y366	437 aa		11.21	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	CLIC1	O00299	241 aa		11.2	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708	SMAD9	O15198	467 aa	Known RBP	11.2	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708	TMCC2	O75069	709 aa		11.2	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708	ATE1	O95260	518 aa		11.2	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708	TFPI	P10646	304 aa		11.2	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708	ETFA	P13804	333 aa		11.2	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708	RYK	P34925	604 aa		11.2	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708	OR3A2	P47893	321 aa		11.2	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708	IDH2	P48735	452 aa	Known RBP	11.2	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708	AQP5	P55064	265 aa		11.2	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708	PLAUR	Q03405	335 aa		11.2	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708	RGN	Q15493	299 aa		11.2	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708	MAPK11	Q15759	364 aa		11.2	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708	MRPL2	Q5T653	305 aa	Known RBP	11.2	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708	ABLIM2	Q6H8Q1	611 aa		11.2	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	11.2	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708		Q6ZT83	130 aa		11.2	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708	ZNF550	Q7Z398	422 aa		11.2	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708	ADGRG3	Q86Y34	549 aa		11.2	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708	OR9I1	Q8NGQ6	314 aa		11.2	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708	OR52P1P	Q8NH57	321 aa		11.2	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708	PIGX	Q8TBF5	258 aa		11.2	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708	PNPT1	Q8TCS8	783 aa	Known RBP	11.2	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708	SLC38A5	Q8WUX1	472 aa		11.2	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708	CKAP2	Q8WWK9	683 aa		11.2	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708	NRGN	Q92686	78 aa		11.2	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708	VPS33A	Q96AX1	596 aa		11.2	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708	DDIT4L	Q96D03	193 aa		11.2	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708	ADAM19	Q9H013	955 aa		11.2	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708	LIME1	Q9H400	295 aa		11.2	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708	A4GALT	Q9NPC4	353 aa		11.2	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708	NGB	Q9NPG2	151 aa		11.2	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708	CTPS2	Q9NRF8	586 aa		11.2	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708	SLC6A13	Q9NSD5	602 aa		11.2	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708	MRGBP	Q9NV56	204 aa		11.2	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708	ING1	Q9UK53	422 aa	Predicted RBP	11.2	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708	TRIM33	Q9UPN9	1127 aa		11.2	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708	CORO2B	Q9UQ03	480 aa		11.2	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708	PCDHB14	Q9Y5E9	798 aa		11.2	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708	SETD2	Q9BYW2	2564 aa	Predicted RBP	11.19	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708		A0A1W2PNR3	127 aa		11.19	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708	CLDN24	A6NM45	220 aa		11.19	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708	BCAS1	O75363	584 aa	Predicted RBP	11.19	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708	GCM2	O75603	506 aa	Predicted RBP	11.19	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708	C1QC	P02747	245 aa		11.19	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708	ETS2	P15036	469 aa		11.19	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708	HOXB9	P17482	250 aa	Predicted RBP	11.19	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708	SLC16A1	P53985	500 aa		11.19	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708	H3F3A	P84243	136 aa		11.19	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708	EPS8	Q12929	822 aa		11.19	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708	ITGAD	Q13349	1161 aa		11.19	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708	SQLE	Q14534	574 aa		11.19	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708	DEFB113	Q30KQ7	82 aa		11.19	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708	SFRP5	Q5T4F7	317 aa		11.19	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708	C1QTNF12	Q5T7M4	302 aa		11.19	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708	METTL21C	Q5VZV1	264 aa		11.19	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708	C20orf204	Q6ZNR8	217 aa		11.19	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708	NUFIP2	Q7Z417	695 aa	Known RBP	11.19	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708	GALNT5	Q7Z7M9	940 aa		11.19	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708	BBS10	Q8TAM1	723 aa		11.19	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708	TSPEAR	Q8WU66	669 aa		11.19	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708	HSD17B8	Q92506	261 aa		11.19	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708	PIGT	Q969N2	578 aa		11.19	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708	SPDL1	Q96EA4	605 aa		11.19	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708	SPATA9	Q9BWV2	254 aa		11.19	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708	POTEKP	Q9BYX7	375 aa		11.19	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708	ACTR6	Q9GZN1	396 aa		11.19	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708	PIF1	Q9H611	641 aa		11.19	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708	C12orf49	Q9H741	205 aa		11.19	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708	TMEM181	Q9P2C4	612 aa		11.19	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708	PLEKHA6	Q9Y2H5	1048 aa		11.19	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708	MED13L	Q71F56	2210 aa		11.19	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708	PRRC2A	P48634	2157 aa	Known RBP	11.18	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708	FLNA	P21333	2647 aa	Known RBP	11.18	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708	TMED7-TICAM2	A0A0A6YYA0	188 aa		11.18	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708		A0A1W2PP18	115 aa		11.18	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708	KLF4	O43474	513 aa		11.18	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708	BCHE	P06276	602 aa		11.18	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708	THBD	P07204	575 aa		11.18	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708	FES	P07332	822 aa		11.18	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708	CD53	P19397	219 aa		11.18	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708	COPZ1	P61923	177 aa		11.18	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708	SLC35A1	P78382	337 aa		11.18	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708	WBP2NL	Q6ICG8	309 aa		11.18	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708	SLC2A7	Q6PXP3	512 aa		11.18	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708	P2RY8	Q86VZ1	359 aa		11.18	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708	TGIF2LY	Q8IUE0	185 aa		11.18	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708	FUNDC1	Q8IVP5	155 aa		11.18	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708	KISS1R	Q969F8	398 aa	Predicted RBP	11.18	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708	PIK3IP1	Q96FE7	263 aa		11.18	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708	TMEM19	Q96HH6	336 aa		11.18	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708	EBF4	Q9BQW3	602 aa		11.18	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708	NAA11	Q9BSU3	229 aa	Predicted RBP	11.18	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708	SPATA5L1	Q9BVQ7	753 aa		11.18	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708	EVA1A	Q9H8M9	152 aa		11.18	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708	SLC52A3	Q9NQ40	469 aa		11.18	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708	CCDC167	Q9P0B6	97 aa		11.18	□□□□□ -0.62
CDK5RAP3-222	ENST00000581708	C6orf203	Q9P0P8	240 aa	Predicted RBP	11.18	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 31 ms