RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 KLHL9Q9P2J3 617 aa18.6■□□□□ 0.57
CCDC42-203ENST00000581598 BTNL2Q9UIR0 455 aa18.6■□□□□ 0.57
CCDC42-203ENST00000581598 SLC35A3Q9Y2D2 325 aa18.6■□□□□ 0.57
CCDC42-203ENST00000581598 WDR45Q9Y484 360 aa18.6■□□□□ 0.57
CCDC42-203ENST00000581598 NAV3Q8IVL0 2385 aa18.6■□□□□ 0.57
CCDC42-203ENST00000581598 NR5A2O00482 541 aa18.59■□□□□ 0.57
CCDC42-203ENST00000581598 CPSF4O95639 269 aaKnown RBP18.59■□□□□ 0.57
CCDC42-203ENST00000581598 PGRP06401 933 aa18.59■□□□□ 0.57
CCDC42-203ENST00000581598 INHBBP09529 407 aa18.59■□□□□ 0.57
CCDC42-203ENST00000581598 OR12D1P0DN82 309 aa18.59■□□□□ 0.57
CCDC42-203ENST00000581598 PAX1P15863 534 aa18.59■□□□□ 0.57
CCDC42-203ENST00000581598 ENPP1P22413 925 aa18.59■□□□□ 0.57
CCDC42-203ENST00000581598 PGM1P36871 562 aa18.59■□□□□ 0.57
CCDC42-203ENST00000581598 SESN3P58005 492 aa18.59■□□□□ 0.57
CCDC42-203ENST00000581598 TXNL4AP83876 142 aaKnown RBP18.59■□□□□ 0.57
CCDC42-203ENST00000581598 P2RY6Q15077 328 aa18.59■□□□□ 0.57
CCDC42-203ENST00000581598 SFRP5Q5T4F7 317 aa18.59■□□□□ 0.57
CCDC42-203ENST00000581598 TYW3Q6IPR3 259 aaKnown RBP18.59■□□□□ 0.57
CCDC42-203ENST00000581598 ZNF704Q6ZNC4 412 aaPredicted RBP18.59■□□□□ 0.57
CCDC42-203ENST00000581598 MSANTD1Q6ZTZ1 278 aa18.59■□□□□ 0.57
CCDC42-203ENST00000581598 PLEKHM3Q6ZWE6 761 aa18.59■□□□□ 0.57
CCDC42-203ENST00000581598 SNX32Q86XE0 403 aa18.59■□□□□ 0.57
CCDC42-203ENST00000581598 ATP6V1C2Q8NEY4 427 aa18.59■□□□□ 0.57
CCDC42-203ENST00000581598 RP9Q8TA86 221 aaKnown RBP18.59■□□□□ 0.57
CCDC42-203ENST00000581598 SLC25A43Q8WUT9 341 aaPredicted RBP18.59■□□□□ 0.57
CCDC42-203ENST00000581598 XAGE5Q8WWM1 108 aa18.59■□□□□ 0.57
CCDC42-203ENST00000581598 ROPN1LQ96C74 230 aa18.59■□□□□ 0.57
CCDC42-203ENST00000581598 CCDC115Q96NT0 180 aa18.59■□□□□ 0.57
CCDC42-203ENST00000581598 PSD2Q9BQI7 771 aa18.59■□□□□ 0.57
CCDC42-203ENST00000581598 GSX2Q9BZM3 304 aa18.59■□□□□ 0.57
CCDC42-203ENST00000581598 SERINC1Q9NRX5 453 aa18.59■□□□□ 0.57
CCDC42-203ENST00000581598 ARL8BQ9NVJ2 186 aa18.59■□□□□ 0.57
CCDC42-203ENST00000581598 ING1Q9UK53 422 aaPredicted RBP18.59■□□□□ 0.57
CCDC42-203ENST00000581598 A0A1W2PNR3 127 aa18.58■□□□□ 0.56
CCDC42-203ENST00000581598 CYTIPO60759 359 aa18.58■□□□□ 0.56
CCDC42-203ENST00000581598 H6PDO95479 791 aa18.58■□□□□ 0.56
CCDC42-203ENST00000581598 UBTFL6P0CB48 400 aaPredicted RBP18.58■□□□□ 0.56
CCDC42-203ENST00000581598 COX4I1P13073 169 aa18.58■□□□□ 0.56
CCDC42-203ENST00000581598 S100A3P33764 101 aa18.58■□□□□ 0.56
CCDC42-203ENST00000581598 KHKP50053 298 aa18.58■□□□□ 0.56
CCDC42-203ENST00000581598 FUT5Q11128 374 aa18.58■□□□□ 0.56
CCDC42-203ENST00000581598 MAPK14Q16539 360 aa18.58■□□□□ 0.56
CCDC42-203ENST00000581598 TNFAIP8L2Q6P589 184 aaPredicted RBP18.58■□□□□ 0.56
CCDC42-203ENST00000581598 FRRS1Q6ZNA5 592 aa18.58■□□□□ 0.56
CCDC42-203ENST00000581598 WFDC8Q8IUA0 241 aa18.58■□□□□ 0.56
CCDC42-203ENST00000581598 ZNF619Q8N2I2 560 aa18.58■□□□□ 0.56
CCDC42-203ENST00000581598 S100PBPQ96BU1 408 aa18.58■□□□□ 0.56
CCDC42-203ENST00000581598 CMTM5Q96DZ9 223 aa18.58■□□□□ 0.56
CCDC42-203ENST00000581598 PLPPR2Q96GM1 343 aa18.58■□□□□ 0.56
CCDC42-203ENST00000581598 A0A1W2PP18 115 aa18.57■□□□□ 0.56
CCDC42-203ENST00000581598 ZNF724A8MTY0 619 aa18.57■□□□□ 0.56
CCDC42-203ENST00000581598 SMAD9O15198 467 aaKnown RBP18.57■□□□□ 0.56
CCDC42-203ENST00000581598 UBOX5O94941 541 aa18.57■□□□□ 0.56
CCDC42-203ENST00000581598 OR3A2P47893 321 aa18.57■□□□□ 0.56
CCDC42-203ENST00000581598 LRRC74AQ0VAA2 488 aa18.57■□□□□ 0.56
CCDC42-203ENST00000581598 CYLC2Q14093 348 aaPredicted RBP18.57■□□□□ 0.56
CCDC42-203ENST00000581598 COQ5Q5HYK3 327 aa18.57■□□□□ 0.56
CCDC42-203ENST00000581598 ADAM5Q6NVV9 412 aa18.57■□□□□ 0.56
CCDC42-203ENST00000581598 TMPPEQ6ZT21 453 aa18.57■□□□□ 0.56
CCDC42-203ENST00000581598 OLIG3Q7RTU3 272 aa18.57■□□□□ 0.56
CCDC42-203ENST00000581598 POU5F2Q8N7G0 328 aa18.57■□□□□ 0.56
CCDC42-203ENST00000581598 ZNF611Q8N823 705 aa18.57■□□□□ 0.56
CCDC42-203ENST00000581598 RAB8BQ92930 207 aa18.57■□□□□ 0.56
CCDC42-203ENST00000581598 SLC35A5Q9BS91 424 aa18.57■□□□□ 0.56
CCDC42-203ENST00000581598 EXOSC3Q9NQT5 275 aaKnown RBP18.57■□□□□ 0.56
CCDC42-203ENST00000581598 TAGLN3Q9UI15 199 aa18.57■□□□□ 0.56
CCDC42-203ENST00000581598 DNHD1Q96M86 4753 aa18.57■□□□□ 0.56
CCDC42-203ENST00000581598 CCDC154A6NI56 674 aa18.56■□□□□ 0.56
CCDC42-203ENST00000581598 BBIP1A8MTZ0 92 aa18.56■□□□□ 0.56
CCDC42-203ENST00000581598 FAM171A2A8MVW0 826 aa18.56■□□□□ 0.56
CCDC42-203ENST00000581598 ZNF814B7Z6K7 855 aa18.56■□□□□ 0.56
CCDC42-203ENST00000581598 EBAG9O00559 213 aa18.56■□□□□ 0.56
CCDC42-203ENST00000581598 FBP2O00757 339 aa18.56■□□□□ 0.56
CCDC42-203ENST00000581598 HS3ST1O14792 307 aa18.56■□□□□ 0.56
CCDC42-203ENST00000581598 CYP7B1O75881 506 aa18.56■□□□□ 0.56
CCDC42-203ENST00000581598 FKBP2P26885 142 aaKnown RBP18.56■□□□□ 0.56
CCDC42-203ENST00000581598 CHI3L1P36222 383 aaPredicted RBP18.56■□□□□ 0.56
CCDC42-203ENST00000581598 APOBEC1P41238 236 aaKnown RBP18.56■□□□□ 0.56
CCDC42-203ENST00000581598 CASP9P55211 416 aa18.56■□□□□ 0.56
CCDC42-203ENST00000581598 CSNK2A1P68400 391 aaPredicted RBP18.56■□□□□ 0.56
CCDC42-203ENST00000581598 MERTKQ12866 999 aa18.56■□□□□ 0.56
CCDC42-203ENST00000581598 ITGADQ13349 1161 aa18.56■□□□□ 0.56
CCDC42-203ENST00000581598 SYT14P1Q58G82 188 aa18.56■□□□□ 0.56
CCDC42-203ENST00000581598 Q6ZT83 130 aa18.56■□□□□ 0.56
CCDC42-203ENST00000581598 HSD17B8Q92506 261 aa18.56■□□□□ 0.56
CCDC42-203ENST00000581598 KISS1RQ969F8 398 aaPredicted RBP18.56■□□□□ 0.56
CCDC42-203ENST00000581598 VPS33AQ96AX1 596 aa18.56■□□□□ 0.56
CCDC42-203ENST00000581598 COX4I2Q96KJ9 171 aa18.56■□□□□ 0.56
CCDC42-203ENST00000581598 OR5B2Q96R09 309 aa18.56■□□□□ 0.56
CCDC42-203ENST00000581598 OR52E6Q96RD3 313 aa18.56■□□□□ 0.56
CCDC42-203ENST00000581598 QRSL1Q9H0R6 528 aaKnown RBP18.56■□□□□ 0.56
CCDC42-203ENST00000581598 NGBQ9NPG2 151 aa18.56■□□□□ 0.56
CCDC42-203ENST00000581598 ST6GALNAC1Q9NSC7 600 aaPredicted RBP18.56■□□□□ 0.56
CCDC42-203ENST00000581598 SPIN1Q9Y657 262 aaPredicted RBP18.56■□□□□ 0.56
CCDC42-203ENST00000581598 IGHV3-15A0A0B4J1V0 119 aa18.55■□□□□ 0.56
CCDC42-203ENST00000581598 LOC100653049A0A140TA62 436 aa18.55■□□□□ 0.56
CCDC42-203ENST00000581598 PRAMEF27A3QJZ7 478 aa18.55■□□□□ 0.56
CCDC42-203ENST00000581598 HMGN4O00479 90 aa18.55■□□□□ 0.56
CCDC42-203ENST00000581598 KRT34O76011 436 aa18.55■□□□□ 0.56
CCDC42-203ENST00000581598 CNOT4O95628 575 aaKnown RBP18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms