RNA–Protein interactions for RNA: ENST00000578985.5

IFT20-208, Transcript of intraflagellar transport 20, humanhuman

TSL 3 BASIC

Gene IFT20, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-208ENST00000578985 PLXDC2Q6UX71 529 aa13.82□□□□□ -0.2
IFT20-208ENST00000578985 RANBP3LQ86VV4 465 aaPredicted RBP13.82□□□□□ -0.2
IFT20-208ENST00000578985 CCDC71Q8IV32 467 aaPredicted RBP13.82□□□□□ -0.2
IFT20-208ENST00000578985 C9orf106Q8NAJ2 232 aa13.82□□□□□ -0.2
IFT20-208ENST00000578985 RBM15BQ8NDT2 890 aaKnown RBP13.82□□□□□ -0.2
IFT20-208ENST00000578985 OR52E4Q8NGH9 312 aa13.82□□□□□ -0.2
IFT20-208ENST00000578985 MBD3L2Q8NHZ7 208 aaPredicted RBP13.82□□□□□ -0.2
IFT20-208ENST00000578985 ASB5Q8WWX0 329 aa13.82□□□□□ -0.2
IFT20-208ENST00000578985 PROX1Q92786 737 aa13.82□□□□□ -0.2
IFT20-208ENST00000578985 SDCCAG3Q96C92 435 aa13.82□□□□□ -0.2
IFT20-208ENST00000578985 TM9SF2Q99805 663 aa13.82□□□□□ -0.2
IFT20-208ENST00000578985 WFDC6Q9BQY6 131 aa13.82□□□□□ -0.2
IFT20-208ENST00000578985 ZNF559Q9BR84 538 aa13.82□□□□□ -0.2
IFT20-208ENST00000578985 PRR14Q9BWN1 585 aa13.82□□□□□ -0.2
IFT20-208ENST00000578985 TRIM2Q9C040 744 aa13.82□□□□□ -0.2
IFT20-208ENST00000578985 PAQR5Q9NXK6 330 aaPredicted RBP13.82□□□□□ -0.2
IFT20-208ENST00000578985 RPS6KB2Q9UBS0 482 aa13.82□□□□□ -0.2
IFT20-208ENST00000578985 Q9UFV3 132 aa13.82□□□□□ -0.2
IFT20-208ENST00000578985 TESQ9UGI8 421 aaKnown RBP13.82□□□□□ -0.2
IFT20-208ENST00000578985 PACSIN3Q9UKS6 424 aa13.82□□□□□ -0.2
IFT20-208ENST00000578985 BAG5Q9UL15 447 aa13.82□□□□□ -0.2
IFT20-208ENST00000578985 RNF6Q9Y252 685 aa13.82□□□□□ -0.2
IFT20-208ENST00000578985 ZNF175Q9Y473 711 aa13.82□□□□□ -0.2
IFT20-208ENST00000578985 CACNA1CQ13936 2221 aa13.82□□□□□ -0.2
IFT20-208ENST00000578985 USP9XQ93008 2570 aaPredicted RBP13.81□□□□□ -0.2
IFT20-208ENST00000578985 A0A1W2PNR3 127 aa13.81□□□□□ -0.2
IFT20-208ENST00000578985 TMEM72A0PK05 275 aa13.81□□□□□ -0.2
IFT20-208ENST00000578985 UBOX5O94941 541 aa13.81□□□□□ -0.2
IFT20-208ENST00000578985 SYNGR4O95473 234 aa13.81□□□□□ -0.2
IFT20-208ENST00000578985 TGM6O95932 706 aa13.81□□□□□ -0.2
IFT20-208ENST00000578985 IL2RAP01589 272 aa13.81□□□□□ -0.2
IFT20-208ENST00000578985 CXCR1P25024 350 aa13.81□□□□□ -0.2
IFT20-208ENST00000578985 HTR2AP28223 471 aa13.81□□□□□ -0.2
IFT20-208ENST00000578985 HTR1EP28566 365 aa13.81□□□□□ -0.2
IFT20-208ENST00000578985 CPOXP36551 454 aa13.81□□□□□ -0.2
IFT20-208ENST00000578985 PON3Q15166 354 aa13.81□□□□□ -0.2
IFT20-208ENST00000578985 SYT14P1Q58G82 188 aa13.81□□□□□ -0.2
IFT20-208ENST00000578985 RINLQ6ZS11 566 aa13.81□□□□□ -0.2
IFT20-208ENST00000578985 RNF148Q8N7C7 305 aa13.81□□□□□ -0.2
IFT20-208ENST00000578985 VANGL1Q8TAA9 524 aaPredicted RBP13.81□□□□□ -0.2
IFT20-208ENST00000578985 C3orf49Q96BT1 292 aa13.81□□□□□ -0.2
IFT20-208ENST00000578985 OR5B2Q96R09 309 aa13.81□□□□□ -0.2
IFT20-208ENST00000578985 MCHR1Q99705 422 aa13.81□□□□□ -0.2
IFT20-208ENST00000578985 TMEM27Q9HBJ8 222 aa13.81□□□□□ -0.2
IFT20-208ENST00000578985 TIGARQ9NQ88 270 aa13.81□□□□□ -0.2
IFT20-208ENST00000578985 SLC9A8Q9Y2E8 581 aa13.81□□□□□ -0.2
IFT20-208ENST00000578985 A0A1B0GWA3 101 aa13.8□□□□□ -0.2
IFT20-208ENST00000578985 ZNF208O43345 1280 aa13.8□□□□□ -0.2
IFT20-208ENST00000578985 TPST2O60704 377 aa13.8□□□□□ -0.2
IFT20-208ENST00000578985 RCBTB2O95199 551 aa13.8□□□□□ -0.2
IFT20-208ENST00000578985 HSD17B1P14061 328 aa13.8□□□□□ -0.2
IFT20-208ENST00000578985 NCK1P16333 377 aa13.8□□□□□ -0.2
IFT20-208ENST00000578985 GGT1P19440 569 aa13.8□□□□□ -0.2
IFT20-208ENST00000578985 CHRNB4P30926 498 aa13.8□□□□□ -0.2
IFT20-208ENST00000578985 CLK1P49759 484 aaKnown RBP13.8□□□□□ -0.2
IFT20-208ENST00000578985 MAP2K6P52564 334 aa13.8□□□□□ -0.2
IFT20-208ENST00000578985 OR1Q1Q15612 314 aa13.8□□□□□ -0.2
IFT20-208ENST00000578985 NPTX1Q15818 432 aa13.8□□□□□ -0.2
IFT20-208ENST00000578985 PPP4R4Q6NUP7 873 aa13.8□□□□□ -0.2
IFT20-208ENST00000578985 ATG4DQ86TL0 474 aaPredicted RBP13.8□□□□□ -0.2
IFT20-208ENST00000578985 CARM1Q86X55 608 aa13.8□□□□□ -0.2
IFT20-208ENST00000578985 LSMEM1Q8N8F7 131 aa13.8□□□□□ -0.2
IFT20-208ENST00000578985 FAM156AQ8NDB6 213 aa13.8□□□□□ -0.2
IFT20-208ENST00000578985 OR4D11Q8NGI4 311 aa13.8□□□□□ -0.2
IFT20-208ENST00000578985 OR6T1Q8NGN1 323 aa13.8□□□□□ -0.2
IFT20-208ENST00000578985 FNDC9Q8TBE3 224 aa13.8□□□□□ -0.2
IFT20-208ENST00000578985 FAM162AQ96A26 154 aa13.8□□□□□ -0.2
IFT20-208ENST00000578985 TPD52L3Q96J77 140 aa13.8□□□□□ -0.2
IFT20-208ENST00000578985 ZFP3Q96NJ6 502 aa13.8□□□□□ -0.2
IFT20-208ENST00000578985 PRRG4Q9BZD6 226 aa13.8□□□□□ -0.2
IFT20-208ENST00000578985 OR11A1Q9GZK7 315 aa13.8□□□□□ -0.2
IFT20-208ENST00000578985 COQ10BQ9H8M1 238 aa13.8□□□□□ -0.2
IFT20-208ENST00000578985 ADPRHL2Q9NX46 363 aa13.8□□□□□ -0.2
IFT20-208ENST00000578985 SELENONQ9NZV5 590 aa13.8□□□□□ -0.2
IFT20-208ENST00000578985 CD300AQ9UGN4 299 aa13.8□□□□□ -0.2
IFT20-208ENST00000578985 EGFL7Q9UHF1 273 aa13.8□□□□□ -0.2
IFT20-208ENST00000578985 MCTS1Q9ULC4 181 aaKnown RBP13.8□□□□□ -0.2
IFT20-208ENST00000578985 ICE1Q9Y2F5 2266 aa13.8□□□□□ -0.2
IFT20-208ENST00000578985 TMEM229AB2RXF0 380 aa13.79□□□□□ -0.2
IFT20-208ENST00000578985 FMO6PO60774 539 aa13.79□□□□□ -0.2
IFT20-208ENST00000578985 GMNNO75496 209 aa13.79□□□□□ -0.2
IFT20-208ENST00000578985 TMIGD3P0DMS9 266 aaPredicted RBP13.79□□□□□ -0.2
IFT20-208ENST00000578985 FCGR2AP12318 317 aa13.79□□□□□ -0.2
IFT20-208ENST00000578985 TCN1P20061 433 aaPredicted RBP13.79□□□□□ -0.2
IFT20-208ENST00000578985 TNFRSF1BP20333 461 aa13.79□□□□□ -0.2
IFT20-208ENST00000578985 CTSSP25774 331 aa13.79□□□□□ -0.2
IFT20-208ENST00000578985 RAC3P60763 192 aa13.79□□□□□ -0.2
IFT20-208ENST00000578985 SELENOWP63302 87 aa13.79□□□□□ -0.2
IFT20-208ENST00000578985 CDSNQ15517 529 aa13.79□□□□□ -0.2
IFT20-208ENST00000578985 SPATS1Q496A3 300 aa13.79□□□□□ -0.2
IFT20-208ENST00000578985 GLYATQ6IB77 296 aa13.79□□□□□ -0.2
IFT20-208ENST00000578985 OR2A2Q6IF42 318 aa13.79□□□□□ -0.2
IFT20-208ENST00000578985 TMPPEQ6ZT21 453 aa13.79□□□□□ -0.2
IFT20-208ENST00000578985 RBM45Q8IUH3 476 aaKnown RBP13.79□□□□□ -0.2
IFT20-208ENST00000578985 NAXEQ8NCW5 288 aa13.79□□□□□ -0.2
IFT20-208ENST00000578985 LILRB4Q8NHJ6 448 aa13.79□□□□□ -0.2
IFT20-208ENST00000578985 DNAJA4Q8WW22 397 aaPredicted RBP13.79□□□□□ -0.2
IFT20-208ENST00000578985 LZICQ8WZA0 190 aa13.79□□□□□ -0.2
IFT20-208ENST00000578985 CPNE4Q96A23 557 aaPredicted RBP13.79□□□□□ -0.2
IFT20-208ENST00000578985 INTS12Q96CB8 462 aaKnown RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms