RNA–Protein interactions for RNA: ENST00000578663.1

CDK5RAP3-209, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 949 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-209ENST00000578663 NSRP1Q9H0G5 558 aaKnown RBP6.31□□□□□ -1.4
CDK5RAP3-209ENST00000578663 OCEL1Q9H607 264 aa6.31□□□□□ -1.4
CDK5RAP3-209ENST00000578663 ZNF385DQ9H6B1 395 aa6.31□□□□□ -1.4
CDK5RAP3-209ENST00000578663 REEP4Q9H6H4 257 aa6.31□□□□□ -1.4
CDK5RAP3-209ENST00000578663 TIGARQ9NQ88 270 aa6.31□□□□□ -1.4
CDK5RAP3-209ENST00000578663 MIEF1Q9NQG6 463 aa6.31□□□□□ -1.4
CDK5RAP3-209ENST00000578663 ING1Q9UK53 422 aaPredicted RBP6.31□□□□□ -1.4
CDK5RAP3-209ENST00000578663 POU2F3Q9UKI9 436 aa6.31□□□□□ -1.4
CDK5RAP3-209ENST00000578663 UTS2RQ9UKP6 389 aa6.31□□□□□ -1.4
CDK5RAP3-209ENST00000578663 A0A0J9YW62 118 aa6.3□□□□□ -1.4
CDK5RAP3-209ENST00000578663 ZNF814B7Z6K7 855 aa6.3□□□□□ -1.4
CDK5RAP3-209ENST00000578663 TNFSF11O14788 317 aa6.3□□□□□ -1.4
CDK5RAP3-209ENST00000578663 PLOD3O60568 738 aa6.3□□□□□ -1.4
CDK5RAP3-209ENST00000578663 TBX19O60806 448 aa6.3□□□□□ -1.4
CDK5RAP3-209ENST00000578663 ERAL1O75616 437 aaKnown RBP6.3□□□□□ -1.4
CDK5RAP3-209ENST00000578663 YES1P07947 543 aa6.3□□□□□ -1.4
CDK5RAP3-209ENST00000578663 ARAFP10398 606 aa6.3□□□□□ -1.4
CDK5RAP3-209ENST00000578663 LAMP1P11279 417 aa6.3□□□□□ -1.4
CDK5RAP3-209ENST00000578663 IDO1P14902 403 aa6.3□□□□□ -1.4
CDK5RAP3-209ENST00000578663 GGT1P19440 569 aa6.3□□□□□ -1.4
CDK5RAP3-209ENST00000578663 NCF2P19878 526 aaPredicted RBP6.3□□□□□ -1.4
CDK5RAP3-209ENST00000578663 PSMA4P25789 261 aaKnown RBP6.3□□□□□ -1.4
CDK5RAP3-209ENST00000578663 CD40P25942 277 aa6.3□□□□□ -1.4
CDK5RAP3-209ENST00000578663 GIFP27352 417 aa6.3□□□□□ -1.4
CDK5RAP3-209ENST00000578663 ELK4P28324 431 aa6.3□□□□□ -1.4
CDK5RAP3-209ENST00000578663 CHN2P52757 468 aa6.3□□□□□ -1.4
CDK5RAP3-209ENST00000578663 PSMD4P55036 377 aaKnown RBP6.3□□□□□ -1.4
CDK5RAP3-209ENST00000578663 CDH15P55291 814 aa6.3□□□□□ -1.4
CDK5RAP3-209ENST00000578663 MRPS35P82673 323 aaKnown RBP6.3□□□□□ -1.4
CDK5RAP3-209ENST00000578663 PRR5P85299 388 aa6.3□□□□□ -1.4
CDK5RAP3-209ENST00000578663 LGALS3BPQ08380 585 aa6.3□□□□□ -1.4
CDK5RAP3-209ENST00000578663 STX5Q13190 355 aa6.3□□□□□ -1.4
CDK5RAP3-209ENST00000578663 HEPACAMQ14CZ8 416 aa6.3□□□□□ -1.4
CDK5RAP3-209ENST00000578663 OCLNQ16625 522 aa6.3□□□□□ -1.4
CDK5RAP3-209ENST00000578663 GSTA3Q16772 222 aa6.3□□□□□ -1.4
CDK5RAP3-209ENST00000578663 IQCCQ4KMZ1 466 aa6.3□□□□□ -1.4
CDK5RAP3-209ENST00000578663 PDCD4Q53EL6 469 aaKnown RBP6.3□□□□□ -1.4
CDK5RAP3-209ENST00000578663 AWAT1Q58HT5 328 aa6.3□□□□□ -1.4
CDK5RAP3-209ENST00000578663 PIGWQ7Z7B1 504 aa6.3□□□□□ -1.4
CDK5RAP3-209ENST00000578663 CPLX4Q7Z7G2 160 aa6.3□□□□□ -1.4
CDK5RAP3-209ENST00000578663 SLC44A2Q8IWA5 706 aaPredicted RBP6.3□□□□□ -1.4
CDK5RAP3-209ENST00000578663 SLC43A2Q8N370 569 aa6.3□□□□□ -1.4
CDK5RAP3-209ENST00000578663 DUSP19Q8WTR2 217 aa6.3□□□□□ -1.4
CDK5RAP3-209ENST00000578663 CIDECQ96AQ7 238 aaPredicted RBP6.3□□□□□ -1.4
CDK5RAP3-209ENST00000578663 C3orf49Q96BT1 292 aa6.3□□□□□ -1.4
CDK5RAP3-209ENST00000578663 PPCDCQ96CD2 204 aa6.3□□□□□ -1.4
CDK5RAP3-209ENST00000578663 CNRIP1Q96F85 164 aaPredicted RBP6.3□□□□□ -1.4
CDK5RAP3-209ENST00000578663 REXO5Q96IC2 774 aaKnown RBP6.3□□□□□ -1.4
CDK5RAP3-209ENST00000578663 KLHL15Q96M94 604 aa6.3□□□□□ -1.4
CDK5RAP3-209ENST00000578663 FOXN4Q96NZ1 517 aa6.3□□□□□ -1.4
CDK5RAP3-209ENST00000578663 JMJD8Q96S16 334 aa6.3□□□□□ -1.4
CDK5RAP3-209ENST00000578663 CCT8L2Q96SF2 557 aa6.3□□□□□ -1.4
CDK5RAP3-209ENST00000578663 SOX7Q9BT81 388 aa6.3□□□□□ -1.4
CDK5RAP3-209ENST00000578663 DPY30Q9C005 99 aa6.3□□□□□ -1.4
CDK5RAP3-209ENST00000578663 BPESC1Q9GZL8 116 aa6.3□□□□□ -1.4
CDK5RAP3-209ENST00000578663 SAP130Q9H0E3 1048 aa6.3□□□□□ -1.4
CDK5RAP3-209ENST00000578663 BCO1Q9HAY6 547 aa6.3□□□□□ -1.4
CDK5RAP3-209ENST00000578663 SLC35C2Q9NQQ7 365 aa6.3□□□□□ -1.4
CDK5RAP3-209ENST00000578663 SDR39U1Q9NRG7 319 aaPredicted RBP6.3□□□□□ -1.4
CDK5RAP3-209ENST00000578663 TAS2R9Q9NYW1 312 aa6.3□□□□□ -1.4
CDK5RAP3-209ENST00000578663 ZIM2Q9NZV7 527 aa6.3□□□□□ -1.4
CDK5RAP3-209ENST00000578663 SH3BP4Q9P0V3 963 aa6.3□□□□□ -1.4
CDK5RAP3-209ENST00000578663 ATP6V1HQ9UI12 483 aa6.3□□□□□ -1.4
CDK5RAP3-209ENST00000578663 OR10H1Q9Y4A9 318 aa6.3□□□□□ -1.4
CDK5RAP3-209ENST00000578663 PCDHGB1Q9Y5G3 927 aa6.3□□□□□ -1.4
CDK5RAP3-209ENST00000578663 ZNF780BQ9Y6R6 833 aa6.3□□□□□ -1.4
CDK5RAP3-209ENST00000578663 HEATR1Q9H583 2144 aaKnown RBP6.29□□□□□ -1.4
CDK5RAP3-209ENST00000578663 MYO1GB0I1T2 1018 aa6.29□□□□□ -1.4
CDK5RAP3-209ENST00000578663 PDPK1O15530 556 aa6.29□□□□□ -1.4
CDK5RAP3-209ENST00000578663 COQ9O75208 318 aa6.29□□□□□ -1.4
CDK5RAP3-209ENST00000578663 LYZL6O75951 148 aa6.29□□□□□ -1.4
CDK5RAP3-209ENST00000578663 LY6HO94772 140 aa6.29□□□□□ -1.4
CDK5RAP3-209ENST00000578663 PRKD3O94806 890 aa6.29□□□□□ -1.4
CDK5RAP3-209ENST00000578663 SLITRK5O94991 958 aa6.29□□□□□ -1.4
CDK5RAP3-209ENST00000578663 PRPS1L1P21108 318 aa6.29□□□□□ -1.4
CDK5RAP3-209ENST00000578663 APOBEC3AP31941 199 aaPredicted RBP6.29□□□□□ -1.4
CDK5RAP3-209ENST00000578663 MRPL19P49406 292 aaKnown RBP6.29□□□□□ -1.4
CDK5RAP3-209ENST00000578663 ATP4BP51164 291 aa6.29□□□□□ -1.4
CDK5RAP3-209ENST00000578663 CARD18P57730 90 aa6.29□□□□□ -1.4
CDK5RAP3-209ENST00000578663 STX1BP61266 288 aa6.29□□□□□ -1.4
CDK5RAP3-209ENST00000578663 PHC1P78364 1004 aa6.29□□□□□ -1.4
CDK5RAP3-209ENST00000578663 PSG6Q00889 435 aa6.29□□□□□ -1.4
CDK5RAP3-209ENST00000578663 DECR1Q16698 335 aa6.29□□□□□ -1.4
CDK5RAP3-209ENST00000578663 SWI5Q1ZZU3 235 aa6.29□□□□□ -1.4
CDK5RAP3-209ENST00000578663 PGS1Q32NB8 556 aa6.29□□□□□ -1.4
CDK5RAP3-209ENST00000578663 PLPPR5Q32ZL2 321 aa6.29□□□□□ -1.4
CDK5RAP3-209ENST00000578663 SPANXN4Q5MJ08 99 aa6.29□□□□□ -1.4
CDK5RAP3-209ENST00000578663 OR4F3Q6IEY1 312 aa6.29□□□□□ -1.4
CDK5RAP3-209ENST00000578663 FCRLAQ7L513 359 aa6.29□□□□□ -1.4
CDK5RAP3-209ENST00000578663 R3HCC1LQ7Z5L2 792 aaKnown RBP6.29□□□□□ -1.4
CDK5RAP3-209ENST00000578663 FUNDC1Q8IVP5 155 aa6.29□□□□□ -1.4
CDK5RAP3-209ENST00000578663 TUSC5Q8IXB3 177 aa6.29□□□□□ -1.4
CDK5RAP3-209ENST00000578663 CCDC116Q8IYX3 515 aa6.29□□□□□ -1.4
CDK5RAP3-209ENST00000578663 MIER2Q8N344 545 aa6.29□□□□□ -1.4
CDK5RAP3-209ENST00000578663 TEX29Q8N6K0 151 aa6.29□□□□□ -1.4
CDK5RAP3-209ENST00000578663 OR9A2Q8NGT5 310 aa6.29□□□□□ -1.4
CDK5RAP3-209ENST00000578663 FAM110BQ8TC76 370 aa6.29□□□□□ -1.4
CDK5RAP3-209ENST00000578663 OSTF1Q92882 214 aa6.29□□□□□ -1.4
CDK5RAP3-209ENST00000578663 TESCQ96BS2 214 aa6.29□□□□□ -1.4
CDK5RAP3-209ENST00000578663 COQ8BQ96D53 544 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms