RNA–Protein interactions for RNA: ENST00000578595.1

SS18-209, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 406 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-209ENST00000578595 SERPINA11Q86U17 422 aa17.43■□□□□ 0.38
SS18-209ENST00000578595 LSRQ86X29 649 aaPredicted RBP17.43■□□□□ 0.38
SS18-209ENST00000578595 ZNF295-AS1Q8N0V1 137 aa17.43■□□□□ 0.38
SS18-209ENST00000578595 C11orf65Q8NCR3 313 aa17.43■□□□□ 0.38
SS18-209ENST00000578595 HIPK4Q8NE63 616 aa17.43■□□□□ 0.38
SS18-209ENST00000578595 ELAC2Q9BQ52 826 aaKnown RBP17.43■□□□□ 0.38
SS18-209ENST00000578595 OR11A1Q9GZK7 315 aa17.43■□□□□ 0.38
SS18-209ENST00000578595 PIF1Q9H611 641 aa17.43■□□□□ 0.38
SS18-209ENST00000578595 TMEM38AQ9H6F2 299 aa17.43■□□□□ 0.38
SS18-209ENST00000578595 RPS6KB2Q9UBS0 482 aa17.43■□□□□ 0.38
SS18-209ENST00000578595 KCNN3Q9UGI6 736 aa17.43■□□□□ 0.38
SS18-209ENST00000578595 APCP25054 2843 aa17.43■□□□□ 0.38
SS18-209ENST00000578595 CREBBPQ92793 2442 aa17.42■□□□□ 0.38
SS18-209ENST00000578595 BBIP1A8MTZ0 92 aa17.42■□□□□ 0.38
SS18-209ENST00000578595 A8MXE2 369 aa17.42■□□□□ 0.38
SS18-209ENST00000578595 FBP2O00757 339 aa17.42■□□□□ 0.38
SS18-209ENST00000578595 FESP07332 822 aa17.42■□□□□ 0.38
SS18-209ENST00000578595 SLC1A3P43003 542 aa17.42■□□□□ 0.38
SS18-209ENST00000578595 DIO1P49895 249 aa17.42■□□□□ 0.38
SS18-209ENST00000578595 SEC24CP53992 1094 aa17.42■□□□□ 0.38
SS18-209ENST00000578595 GYS2P54840 703 aa17.42■□□□□ 0.38
SS18-209ENST00000578595 RNPS1Q15287 305 aaKnown RBP17.42■□□□□ 0.38
SS18-209ENST00000578595 SPATA21Q7Z572 469 aa17.42■□□□□ 0.38
SS18-209ENST00000578595 POU5F2Q8N7G0 328 aa17.42■□□□□ 0.38
SS18-209ENST00000578595 PCYOX1LQ8NBM8 494 aa17.42■□□□□ 0.38
SS18-209ENST00000578595 ACBD4Q8NC06 268 aa17.42■□□□□ 0.38
SS18-209ENST00000578595 OR6K3Q8NGY3 331 aa17.42■□□□□ 0.38
SS18-209ENST00000578595 OR10A6Q8NH74 314 aa17.42■□□□□ 0.38
SS18-209ENST00000578595 LINC01560Q8TB33 94 aa17.42■□□□□ 0.38
SS18-209ENST00000578595 RNF128Q8TEB7 428 aa17.42■□□□□ 0.38
SS18-209ENST00000578595 DDIT4LQ96D03 193 aa17.42■□□□□ 0.38
SS18-209ENST00000578595 C14orf79Q96F83 325 aa17.42■□□□□ 0.38
SS18-209ENST00000578595 GLRX2Q9NS18 164 aa17.42■□□□□ 0.38
SS18-209ENST00000578595 CRIM1Q9NZV1 1036 aa17.42■□□□□ 0.38
SS18-209ENST00000578595 JKAMPQ9P055 326 aa17.42■□□□□ 0.38
SS18-209ENST00000578595 OSGIN1Q9UJX0 560 aa17.42■□□□□ 0.38
SS18-209ENST00000578595 POLQO75417 2590 aa17.42■□□□□ 0.38
SS18-209ENST00000578595 AKAP6Q13023 2319 aa17.41■□□□□ 0.38
SS18-209ENST00000578595 PRORSD1PA6NEY8 169 aa17.41■□□□□ 0.38
SS18-209ENST00000578595 SS18L1O75177 396 aaPredicted RBP17.41■□□□□ 0.38
SS18-209ENST00000578595 SERPINB7O75635 380 aa17.41■□□□□ 0.38
SS18-209ENST00000578595 PRG2P13727 222 aa17.41■□□□□ 0.38
SS18-209ENST00000578595 POU2F1P14859 743 aa17.41■□□□□ 0.38
SS18-209ENST00000578595 OR2B6P58173 313 aa17.41■□□□□ 0.38
SS18-209ENST00000578595 RAC3P60763 192 aa17.41■□□□□ 0.38
SS18-209ENST00000578595 HOXC5Q00444 222 aa17.41■□□□□ 0.38
SS18-209ENST00000578595 WBP2NLQ6ICG8 309 aa17.41■□□□□ 0.38
SS18-209ENST00000578595 CPLX4Q7Z7G2 160 aa17.41■□□□□ 0.38
SS18-209ENST00000578595 STK32CQ86UX6 486 aa17.41■□□□□ 0.38
SS18-209ENST00000578595 ADGRG3Q86Y34 549 aa17.41■□□□□ 0.38
SS18-209ENST00000578595 ARMC8Q8IUR7 673 aa17.41■□□□□ 0.38
SS18-209ENST00000578595 ZNF610Q8N9Z0 462 aa17.41■□□□□ 0.38
SS18-209ENST00000578595 RNF217Q8TC41 542 aa17.41■□□□□ 0.38
SS18-209ENST00000578595 SH3GL1Q99961 368 aa17.41■□□□□ 0.38
SS18-209ENST00000578595 KLHL9Q9P2J3 617 aa17.41■□□□□ 0.38
SS18-209ENST00000578595 DCHS2Q6V1P9 2916 aa17.41■□□□□ 0.38
SS18-209ENST00000578595 ABCA4P78363 2273 aa17.4■□□□□ 0.38
SS18-209ENST00000578595 TMEM72A0PK05 275 aa17.4■□□□□ 0.38
SS18-209ENST00000578595 FAAHO00519 579 aa17.4■□□□□ 0.38
SS18-209ENST00000578595 DYNC1I1O14576 645 aa17.4■□□□□ 0.38
SS18-209ENST00000578595 CCDC22O60826 627 aa17.4■□□□□ 0.38
SS18-209ENST00000578595 PRKD3O94806 890 aa17.4■□□□□ 0.38
SS18-209ENST00000578595 OPN1SWP03999 348 aa17.4■□□□□ 0.38
SS18-209ENST00000578595 AGTR1P30556 359 aa17.4■□□□□ 0.38
SS18-209ENST00000578595 PRKAR1BP31321 381 aa17.4■□□□□ 0.38
SS18-209ENST00000578595 GNGT1P63211 74 aa17.4■□□□□ 0.38
SS18-209ENST00000578595 SORDQ00796 357 aa17.4■□□□□ 0.38
SS18-209ENST00000578595 RASGEF1BQ0VAM2 473 aa17.4■□□□□ 0.38
SS18-209ENST00000578595 TMPPEQ6ZT21 453 aa17.4■□□□□ 0.38
SS18-209ENST00000578595 TUSC5Q8IXB3 177 aa17.4■□□□□ 0.38
SS18-209ENST00000578595 SLC43A2Q8N370 569 aa17.4■□□□□ 0.38
SS18-209ENST00000578595 SLC26A7Q8TE54 656 aa17.4■□□□□ 0.38
SS18-209ENST00000578595 LRRC58Q96CX6 371 aa17.4■□□□□ 0.38
SS18-209ENST00000578595 ARL5BQ96KC2 179 aa17.4■□□□□ 0.38
SS18-209ENST00000578595 ECSITQ9BQ95 431 aa17.4■□□□□ 0.38
SS18-209ENST00000578595 KLHL4Q9C0H6 718 aa17.4■□□□□ 0.38
SS18-209ENST00000578595 GID8Q9NWU2 228 aa17.4■□□□□ 0.38
SS18-209ENST00000578595 KLHL28Q9NXS3 571 aa17.4■□□□□ 0.38
SS18-209ENST00000578595 KLHL13Q9P2N7 655 aa17.4■□□□□ 0.38
SS18-209ENST00000578595 GMEB1Q9Y692 573 aa17.4■□□□□ 0.38
SS18-209ENST00000578595 SMAD9O15198 467 aaKnown RBP17.39■□□□□ 0.37
SS18-209ENST00000578595 CD8BP10966 210 aa17.39■□□□□ 0.37
SS18-209ENST00000578595 FKBP2P26885 142 aaKnown RBP17.39■□□□□ 0.37
SS18-209ENST00000578595 ADSLP30566 484 aaPredicted RBP17.39■□□□□ 0.37
SS18-209ENST00000578595 LSP1P33241 339 aa17.39■□□□□ 0.37
SS18-209ENST00000578595 CD79BP40259 229 aa17.39■□□□□ 0.37
SS18-209ENST00000578595 ACAA2P42765 397 aaKnown RBP17.39■□□□□ 0.37
SS18-209ENST00000578595 RGS8P57771 180 aaPredicted RBP17.39■□□□□ 0.37
SS18-209ENST00000578595 FAM27E3Q08E93 113 aa17.39■□□□□ 0.37
SS18-209ENST00000578595 RBBP4Q09028 425 aa17.39■□□□□ 0.37
SS18-209ENST00000578595 ADRM1Q16186 407 aa17.39■□□□□ 0.37
SS18-209ENST00000578595 RABL3Q5HYI8 236 aa17.39■□□□□ 0.37
SS18-209ENST00000578595 COQ5Q5HYK3 327 aa17.39■□□□□ 0.37
SS18-209ENST00000578595 NANOGP8Q6NSW7 305 aa17.39■□□□□ 0.37
SS18-209ENST00000578595 PTOV1Q86YD1 416 aa17.39■□□□□ 0.37
SS18-209ENST00000578595 FAM222BQ8WU58 562 aa17.39■□□□□ 0.37
SS18-209ENST00000578595 RCN3Q96D15 328 aa17.39■□□□□ 0.37
SS18-209ENST00000578595 KAT8Q9H7Z6 458 aaKnown RBP17.39■□□□□ 0.37
SS18-209ENST00000578595 NANOGQ9H9S0 305 aa17.39■□□□□ 0.37
SS18-209ENST00000578595 MCCC2Q9HCC0 563 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms