RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 DYNC2LI1Q8TCX1 351 aa10.19□□□□□ -0.78
SKA2-204ENST00000578519 FGF11Q92914 225 aa10.19□□□□□ -0.78
SKA2-204ENST00000578519 ERMAPQ96PL5 475 aaPredicted RBP10.19□□□□□ -0.78
SKA2-204ENST00000578519 TNFRSF13CQ96RJ3 184 aa10.19□□□□□ -0.78
SKA2-204ENST00000578519 MEPEQ9NQ76 525 aaPredicted RBP10.19□□□□□ -0.78
SKA2-204ENST00000578519 NANSQ9NR45 359 aa10.19□□□□□ -0.78
SKA2-204ENST00000578519 HAO2Q9NYQ3 351 aa10.19□□□□□ -0.78
SKA2-204ENST00000578519 CCDC59Q9P031 241 aaKnown RBP10.19□□□□□ -0.78
SKA2-204ENST00000578519 GPR52Q9Y2T5 361 aa10.19□□□□□ -0.78
SKA2-204ENST00000578519 CAB39Q9Y376 341 aaPredicted RBP10.19□□□□□ -0.78
SKA2-204ENST00000578519 PCDHGA3Q9Y5H0 932 aa10.19□□□□□ -0.78
SKA2-204ENST00000578519 EML5Q05BV3 1969 aa10.18□□□□□ -0.78
SKA2-204ENST00000578519 LOC100506127A0A0U1RQW1 187 aa10.18□□□□□ -0.78
SKA2-204ENST00000578519 PNMA8CA0A1B0GUJ8 204 aa10.18□□□□□ -0.78
SKA2-204ENST00000578519 DAPL1A0PJW8 107 aa10.18□□□□□ -0.78
SKA2-204ENST00000578519 CLDN25C9JDP6 229 aa10.18□□□□□ -0.78
SKA2-204ENST00000578519 ARPC3O15145 178 aa10.18□□□□□ -0.78
SKA2-204ENST00000578519 OR2T1O43869 369 aa10.18□□□□□ -0.78
SKA2-204ENST00000578519 ICOSLGO75144 302 aa10.18□□□□□ -0.78
SKA2-204ENST00000578519 MT-ATP6P00846 226 aa10.18□□□□□ -0.78
SKA2-204ENST00000578519 CPEP16870 476 aa10.18□□□□□ -0.78
SKA2-204ENST00000578519 NR4A1P22736 598 aa10.18□□□□□ -0.78
SKA2-204ENST00000578519 RNF144AP50876 292 aaPredicted RBP10.18□□□□□ -0.78
SKA2-204ENST00000578519 POLR2HP52434 150 aaKnown RBP10.18□□□□□ -0.78
SKA2-204ENST00000578519 LSM3P62310 102 aaKnown RBP10.18□□□□□ -0.78
SKA2-204ENST00000578519 RUNX1T1Q06455 604 aa10.18□□□□□ -0.78
SKA2-204ENST00000578519 ACSM1Q08AH1 577 aa10.18□□□□□ -0.78
SKA2-204ENST00000578519 ITGADQ13349 1161 aa10.18□□□□□ -0.78
SKA2-204ENST00000578519 TPBGQ13641 420 aa10.18□□□□□ -0.78
SKA2-204ENST00000578519 MFSD13AQ14CX5 517 aa10.18□□□□□ -0.78
SKA2-204ENST00000578519 TRAM1Q15629 374 aa10.18□□□□□ -0.78
SKA2-204ENST00000578519 EXT1Q16394 746 aa10.18□□□□□ -0.78
SKA2-204ENST00000578519 ZNF404Q494X3 552 aa10.18□□□□□ -0.78
SKA2-204ENST00000578519 GPR139Q6DWJ6 353 aa10.18□□□□□ -0.78
SKA2-204ENST00000578519 PLBD1Q6P4A8 553 aa10.18□□□□□ -0.78
SKA2-204ENST00000578519 TUBA3EQ6PEY2 450 aa10.18□□□□□ -0.78
SKA2-204ENST00000578519 C16orf87Q6PH81 154 aa10.18□□□□□ -0.78
SKA2-204ENST00000578519 C19orf48Q6RUI8 117 aa10.18□□□□□ -0.78
SKA2-204ENST00000578519 TMPRSS9Q7Z410 1059 aa10.18□□□□□ -0.78
SKA2-204ENST00000578519 MEX3DQ86XN8 651 aaKnown RBP10.18□□□□□ -0.78
SKA2-204ENST00000578519 EGFL6Q8IUX8 553 aa10.18□□□□□ -0.78
SKA2-204ENST00000578519 GPALPP1Q8IXQ4 340 aa10.18□□□□□ -0.78
SKA2-204ENST00000578519 DND1Q8IYX4 353 aaKnown RBP10.18□□□□□ -0.78
SKA2-204ENST00000578519 ZNF321PQ8N8H1 164 aa10.18□□□□□ -0.78
SKA2-204ENST00000578519 GATSQ8NAP1 163 aa10.18□□□□□ -0.78
SKA2-204ENST00000578519 ZSCAN1Q8NBB4 408 aa10.18□□□□□ -0.78
SKA2-204ENST00000578519 OR6S1Q8NH40 331 aa10.18□□□□□ -0.78
SKA2-204ENST00000578519 MCFD2Q8NI22 146 aa10.18□□□□□ -0.78
SKA2-204ENST00000578519 NACC2Q96BF6 587 aa10.18□□□□□ -0.78
SKA2-204ENST00000578519 ARSGQ96EG1 525 aa10.18□□□□□ -0.78
SKA2-204ENST00000578519 OR5M11Q96RB7 305 aa10.18□□□□□ -0.78
SKA2-204ENST00000578519 DEFB126Q9BYW3 111 aa10.18□□□□□ -0.78
SKA2-204ENST00000578519 ADAM19Q9H013 955 aa10.18□□□□□ -0.78
SKA2-204ENST00000578519 FKRPQ9H9S5 495 aa10.18□□□□□ -0.78
SKA2-204ENST00000578519 EXOSC4Q9NPD3 245 aaKnown RBP10.18□□□□□ -0.78
SKA2-204ENST00000578519 FSCN3Q9NQT6 498 aa10.18□□□□□ -0.78
SKA2-204ENST00000578519 SLC22A11Q9NSA0 550 aa10.18□□□□□ -0.78
SKA2-204ENST00000578519 RXFP3Q9NSD7 469 aa10.18□□□□□ -0.78
SKA2-204ENST00000578519 C20orf141Q9NUB4 165 aa10.18□□□□□ -0.78
SKA2-204ENST00000578519 SLC39A1Q9NY26 324 aa10.18□□□□□ -0.78
SKA2-204ENST00000578519 ZNF229Q9UJW7 825 aa10.18□□□□□ -0.78
SKA2-204ENST00000578519 LSM2Q9Y333 95 aaKnown RBP10.18□□□□□ -0.78
SKA2-204ENST00000578519 PEX16Q9Y5Y5 336 aa10.18□□□□□ -0.78
SKA2-204ENST00000578519 TRAV36DV7A0A075B6V5 113 aa10.17□□□□□ -0.78
SKA2-204ENST00000578519 TRAV27A0A087WT01 109 aa10.17□□□□□ -0.78
SKA2-204ENST00000578519 PATE3B3GLJ2 98 aa10.17□□□□□ -0.78
SKA2-204ENST00000578519 TP53I11O14683 189 aa10.17□□□□□ -0.78
SKA2-204ENST00000578519 TRIM3O75382 744 aaPredicted RBP10.17□□□□□ -0.78
SKA2-204ENST00000578519 PPP1R3DO95685 299 aa10.17□□□□□ -0.78
SKA2-204ENST00000578519 IGHA1P01876 353 aa10.17□□□□□ -0.78
SKA2-204ENST00000578519 CD53P19397 219 aa10.17□□□□□ -0.78
SKA2-204ENST00000578519 GALP22466 123 aa10.17□□□□□ -0.78
SKA2-204ENST00000578519 FKBP2P26885 142 aaKnown RBP10.17□□□□□ -0.78
SKA2-204ENST00000578519 TACR3P29371 465 aa10.17□□□□□ -0.78
SKA2-204ENST00000578519 CCKBRP32239 447 aa10.17□□□□□ -0.78
SKA2-204ENST00000578519 EVI2BP34910 448 aa10.17□□□□□ -0.78
SKA2-204ENST00000578519 ETV5P41161 510 aa10.17□□□□□ -0.78
SKA2-204ENST00000578519 CENPAP49450 140 aa10.17□□□□□ -0.78
SKA2-204ENST00000578519 ETV1P50549 477 aa10.17□□□□□ -0.78
SKA2-204ENST00000578519 SLC16A1P53985 500 aa10.17□□□□□ -0.78
SKA2-204ENST00000578519 MLLT10P55197 1068 aa10.17□□□□□ -0.78
SKA2-204ENST00000578519 AQP6Q13520 282 aa10.17□□□□□ -0.78
SKA2-204ENST00000578519 IL10RAQ13651 578 aa10.17□□□□□ -0.78
SKA2-204ENST00000578519 PON3Q15166 354 aa10.17□□□□□ -0.78
SKA2-204ENST00000578519 ANGPT1Q15389 498 aa10.17□□□□□ -0.78
SKA2-204ENST00000578519 CD226Q15762 336 aa10.17□□□□□ -0.78
SKA2-204ENST00000578519 KLHL12Q53G59 568 aa10.17□□□□□ -0.78
SKA2-204ENST00000578519 SLC35F1Q5T1Q4 408 aa10.17□□□□□ -0.78
SKA2-204ENST00000578519 DCAF12Q5T6F0 453 aa10.17□□□□□ -0.78
SKA2-204ENST00000578519 ZNF385CQ66K41 422 aaPredicted RBP10.17□□□□□ -0.78
SKA2-204ENST00000578519 MRPL14Q6P1L8 145 aaKnown RBP10.17□□□□□ -0.78
SKA2-204ENST00000578519 NIPAL3Q6P499 406 aa10.17□□□□□ -0.78
SKA2-204ENST00000578519 DBX2Q6ZNG2 339 aa10.17□□□□□ -0.78
SKA2-204ENST00000578519 PRR23CQ6ZRP0 262 aa10.17□□□□□ -0.78
SKA2-204ENST00000578519 LANCL3Q6ZV70 420 aa10.17□□□□□ -0.78
SKA2-204ENST00000578519 MAMDC2Q7Z304 686 aaPredicted RBP10.17□□□□□ -0.78
SKA2-204ENST00000578519 GRINAQ7Z429 371 aa10.17□□□□□ -0.78
SKA2-204ENST00000578519 BCDIN3DQ7Z5W3 292 aaKnown RBP10.17□□□□□ -0.78
SKA2-204ENST00000578519 JAZF1Q86VZ6 243 aa10.17□□□□□ -0.78
SKA2-204ENST00000578519 PRR22Q8IZ63 422 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms