RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-209ENST00000578329 SYNGR4O95473 234 aa3.89□□□□□ -1.79
PPP4R1-209ENST00000578329 CSTAP01040 98 aa3.89□□□□□ -1.79
PPP4R1-209ENST00000578329 GSNP06396 782 aa3.89□□□□□ -1.79
PPP4R1-209ENST00000578329 BGNP21810 368 aa3.89□□□□□ -1.79
PPP4R1-209ENST00000578329 MATN1P21941 496 aa3.89□□□□□ -1.79
PPP4R1-209ENST00000578329 CD40P25942 277 aa3.89□□□□□ -1.79
PPP4R1-209ENST00000578329 HPCAL1P37235 193 aa3.89□□□□□ -1.79
PPP4R1-209ENST00000578329 NME5P56597 212 aa3.89□□□□□ -1.79
PPP4R1-209ENST00000578329 ABCE1P61221 599 aaKnown RBP3.89□□□□□ -1.79
PPP4R1-209ENST00000578329 RPS4XP62701 263 aaKnown RBP3.89□□□□□ -1.79
PPP4R1-209ENST00000578329 KCNJ10P78508 379 aa3.89□□□□□ -1.79
PPP4R1-209ENST00000578329 HGFACQ04756 655 aa3.89□□□□□ -1.79
PPP4R1-209ENST00000578329 RASGEF1BQ0VAM2 473 aa3.89□□□□□ -1.79
PPP4R1-209ENST00000578329 BST1Q10588 318 aa3.89□□□□□ -1.79
PPP4R1-209ENST00000578329 MERTKQ12866 999 aa3.89□□□□□ -1.79
PPP4R1-209ENST00000578329 BNIP2Q12982 314 aa3.89□□□□□ -1.79
PPP4R1-209ENST00000578329 CHI3L2Q15782 390 aa3.89□□□□□ -1.79
PPP4R1-209ENST00000578329 SWI5Q1ZZU3 235 aa3.89□□□□□ -1.79
PPP4R1-209ENST00000578329 PGS1Q32NB8 556 aa3.89□□□□□ -1.79
PPP4R1-209ENST00000578329 KRTAP24-1Q3LI83 254 aa3.89□□□□□ -1.79
PPP4R1-209ENST00000578329 ELOA3BQ3SY89 546 aa3.89□□□□□ -1.79
PPP4R1-209ENST00000578329 VPS26BQ4G0F5 336 aa3.89□□□□□ -1.79
PPP4R1-209ENST00000578329 TIMM23BQ5SRD1 257 aa3.89□□□□□ -1.79
PPP4R1-209ENST00000578329 PHYHD1Q5SRE7 291 aa3.89□□□□□ -1.79
PPP4R1-209ENST00000578329 FBXW9Q5XUX1 488 aa3.89□□□□□ -1.79
PPP4R1-209ENST00000578329 OGFOD2Q6N063 350 aa3.89□□□□□ -1.79
PPP4R1-209ENST00000578329 PPP4R4Q6NUP7 873 aa3.89□□□□□ -1.79
PPP4R1-209ENST00000578329 CHMP1BQ7LBR1 199 aa3.89□□□□□ -1.79
PPP4R1-209ENST00000578329 SZRD1Q7Z422 152 aa3.89□□□□□ -1.79
PPP4R1-209ENST00000578329 R3HCC1LQ7Z5L2 792 aaKnown RBP3.89□□□□□ -1.79
PPP4R1-209ENST00000578329 MTDHQ86UE4 582 aaKnown RBP3.89□□□□□ -1.79
PPP4R1-209ENST00000578329 RNF130Q86XS8 419 aa3.89□□□□□ -1.79
PPP4R1-209ENST00000578329 VRK2Q86Y07 508 aa3.89□□□□□ -1.79
PPP4R1-209ENST00000578329 HIPK1Q86Z02 1210 aa3.89□□□□□ -1.79
PPP4R1-209ENST00000578329 EPHX4Q8IUS5 362 aa3.89□□□□□ -1.79
PPP4R1-209ENST00000578329 CLIP4Q8N3C7 705 aa3.89□□□□□ -1.79
PPP4R1-209ENST00000578329 MREGQ8N565 214 aa3.89□□□□□ -1.79
PPP4R1-209ENST00000578329 ZNF525Q8N782 197 aa3.89□□□□□ -1.79
PPP4R1-209ENST00000578329 TMEM99Q8N816 258 aa3.89□□□□□ -1.79
PPP4R1-209ENST00000578329 FNDC5Q8NAU1 212 aa3.89□□□□□ -1.79
PPP4R1-209ENST00000578329 TOR1AIP2Q8NFQ8 470 aa3.89□□□□□ -1.79
PPP4R1-209ENST00000578329 STEAP2Q8NFT2 490 aa3.89□□□□□ -1.79
PPP4R1-209ENST00000578329 ELOA3Q8NG57 546 aa3.89□□□□□ -1.79
PPP4R1-209ENST00000578329 OR9I1Q8NGQ6 314 aa3.89□□□□□ -1.79
PPP4R1-209ENST00000578329 OR52N5Q8NH56 324 aa3.89□□□□□ -1.79
PPP4R1-209ENST00000578329 RFWD2Q8NHY2 731 aa3.89□□□□□ -1.79
PPP4R1-209ENST00000578329 ADAMTS15Q8TE58 950 aa3.89□□□□□ -1.79
PPP4R1-209ENST00000578329 TMEM171Q8WVE6 324 aa3.89□□□□□ -1.79
PPP4R1-209ENST00000578329 ST8SIA1Q92185 356 aa3.89□□□□□ -1.79
PPP4R1-209ENST00000578329 HSD17B8Q92506 261 aa3.89□□□□□ -1.79
PPP4R1-209ENST00000578329 KISS1RQ969F8 398 aaPredicted RBP3.89□□□□□ -1.79
PPP4R1-209ENST00000578329 FBXW5Q969U6 566 aa3.89□□□□□ -1.79
PPP4R1-209ENST00000578329 TUBGCP3Q96CW5 907 aa3.89□□□□□ -1.79
PPP4R1-209ENST00000578329 AURKBQ96GD4 344 aaPredicted RBP3.89□□□□□ -1.79
PPP4R1-209ENST00000578329 PRR14Q9BWN1 585 aa3.89□□□□□ -1.79
PPP4R1-209ENST00000578329 NUF2Q9BZD4 464 aa3.89□□□□□ -1.79
PPP4R1-209ENST00000578329 PRRG4Q9BZD6 226 aa3.89□□□□□ -1.79
PPP4R1-209ENST00000578329 HOXD1Q9GZZ0 328 aa3.89□□□□□ -1.79
PPP4R1-209ENST00000578329 IKZF5Q9H5V7 419 aa3.89□□□□□ -1.79
PPP4R1-209ENST00000578329 WDR55Q9H6Y2 383 aaPredicted RBP3.89□□□□□ -1.79
PPP4R1-209ENST00000578329 PPCSQ9HAB8 311 aa3.89□□□□□ -1.79
PPP4R1-209ENST00000578329 MEAF6Q9HAF1 191 aa3.89□□□□□ -1.79
PPP4R1-209ENST00000578329 NOX3Q9HBY0 568 aa3.89□□□□□ -1.79
PPP4R1-209ENST00000578329 AIG1Q9NVV5 245 aa3.89□□□□□ -1.79
PPP4R1-209ENST00000578329 PAQR5Q9NXK6 330 aaPredicted RBP3.89□□□□□ -1.79
PPP4R1-209ENST00000578329 SLC25A37Q9NYZ2 338 aa3.89□□□□□ -1.79
PPP4R1-209ENST00000578329 CISD1Q9NZ45 108 aaKnown RBP3.89□□□□□ -1.79
PPP4R1-209ENST00000578329 B3GAT1Q9P2W7 334 aa3.89□□□□□ -1.79
PPP4R1-209ENST00000578329 MRTO4Q9UKD2 239 aaKnown RBP3.89□□□□□ -1.79
PPP4R1-209ENST00000578329 TRBV5-3A0A0A0MS03 114 aa3.88□□□□□ -1.79
PPP4R1-209ENST00000578329 TMED7-TICAM2A0A0A6YYA0 188 aa3.88□□□□□ -1.79
PPP4R1-209ENST00000578329 IGHV1-18A0A0C4DH31 117 aa3.88□□□□□ -1.79
PPP4R1-209ENST00000578329 IGHV4-61A0A0C4DH41 118 aa3.88□□□□□ -1.79
PPP4R1-209ENST00000578329 PRSS51A0A1B0GVH4 220 aa3.88□□□□□ -1.79
PPP4R1-209ENST00000578329 CDHR4A6H8M9 788 aa3.88□□□□□ -1.79
PPP4R1-209ENST00000578329 LIPT2A6NK58 231 aa3.88□□□□□ -1.79
PPP4R1-209ENST00000578329 TMEM114B3SHH9 223 aa3.88□□□□□ -1.79
PPP4R1-209ENST00000578329 ATP6V1G2-DDX39BF2Z307 99 aa3.88□□□□□ -1.79
PPP4R1-209ENST00000578329 KIF2AO00139 706 aaPredicted RBP3.88□□□□□ -1.79
PPP4R1-209ENST00000578329 SULT2B1O00204 365 aa3.88□□□□□ -1.79
PPP4R1-209ENST00000578329 NR5A2O00482 541 aa3.88□□□□□ -1.79
PPP4R1-209ENST00000578329 FAAHO00519 579 aa3.88□□□□□ -1.79
PPP4R1-209ENST00000578329 FRS3O43559 492 aa3.88□□□□□ -1.79
PPP4R1-209ENST00000578329 SSX4O60224 188 aa3.88□□□□□ -1.79
PPP4R1-209ENST00000578329 TPST1O60507 370 aa3.88□□□□□ -1.79
PPP4R1-209ENST00000578329 TMCC2O75069 709 aa3.88□□□□□ -1.79
PPP4R1-209ENST00000578329 STX11O75558 287 aa3.88□□□□□ -1.79
PPP4R1-209ENST00000578329 UPK3AO75631 287 aa3.88□□□□□ -1.79
PPP4R1-209ENST00000578329 ZNF432O94892 652 aa3.88□□□□□ -1.79
PPP4R1-209ENST00000578329 LYPD3O95274 346 aa3.88□□□□□ -1.79
PPP4R1-209ENST00000578329 PMS2P2O95744 297 aa3.88□□□□□ -1.79
PPP4R1-209ENST00000578329 HSPA4LO95757 839 aa3.88□□□□□ -1.79
PPP4R1-209ENST00000578329 HPRP00739 348 aa3.88□□□□□ -1.79
PPP4R1-209ENST00000578329 PLGP00747 810 aaPredicted RBP3.88□□□□□ -1.79
PPP4R1-209ENST00000578329 THY1P04216 161 aa3.88□□□□□ -1.79
PPP4R1-209ENST00000578329 SERPINE1P05121 402 aa3.88□□□□□ -1.79
PPP4R1-209ENST00000578329 CD3EP07766 207 aa3.88□□□□□ -1.79
PPP4R1-209ENST00000578329 CELA3BP08861 270 aa3.88□□□□□ -1.79
PPP4R1-209ENST00000578329 TFPTP0C1Z6 253 aa3.88□□□□□ -1.79
PPP4R1-209ENST00000578329 GKN3PP0CG01 181 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms