RNA–Protein interactions for RNA: ENST00000578217.1

SLC46A1-201, Transcript of solute carrier family 46 member 1, humanhuman

TSL 4

Gene SLC46A1, Length 596 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1-201ENST00000578217 ZNF225Q9UK10 706 aa6.87□□□□□ -1.31
SLC46A1-201ENST00000578217 NOSIPQ9Y314 301 aaKnown RBP6.87□□□□□ -1.31
SLC46A1-201ENST00000578217 PCDHB14Q9Y5E9 798 aa6.87□□□□□ -1.31
SLC46A1-201ENST00000578217 NUP214P35658 2090 aaPredicted RBP6.86□□□□□ -1.31
SLC46A1-201ENST00000578217 A0A087WV62 115 aa6.86□□□□□ -1.31
SLC46A1-201ENST00000578217 MYO1GB0I1T2 1018 aa6.86□□□□□ -1.31
SLC46A1-201ENST00000578217 COQ9O75208 318 aa6.86□□□□□ -1.31
SLC46A1-201ENST00000578217 GUCY1B2O75343 617 aa6.86□□□□□ -1.31
SLC46A1-201ENST00000578217 RP2O75695 350 aa6.86□□□□□ -1.31
SLC46A1-201ENST00000578217 KCNK2O95069 426 aa6.86□□□□□ -1.31
SLC46A1-201ENST00000578217 TFP02787 698 aa6.86□□□□□ -1.31
SLC46A1-201ENST00000578217 RNASE1P07998 156 aaKnown RBP6.86□□□□□ -1.31
SLC46A1-201ENST00000578217 STMN1P16949 149 aa6.86□□□□□ -1.31
SLC46A1-201ENST00000578217 TSPAN8P19075 237 aa6.86□□□□□ -1.31
SLC46A1-201ENST00000578217 SLC7A1P30825 629 aa6.86□□□□□ -1.31
SLC46A1-201ENST00000578217 ASMTP46597 345 aa6.86□□□□□ -1.31
SLC46A1-201ENST00000578217 DIO1P49895 249 aa6.86□□□□□ -1.31
SLC46A1-201ENST00000578217 NCBP2P52298 156 aaKnown RBP eCLIP6.86□□□□□ -1.31
SLC46A1-201ENST00000578217 SEC24CP53992 1094 aa6.86□□□□□ -1.31
SLC46A1-201ENST00000578217 SLC29A2Q14542 456 aa6.86□□□□□ -1.31
SLC46A1-201ENST00000578217 SLC9A3R2Q15599 337 aa6.86□□□□□ -1.31
SLC46A1-201ENST00000578217 AVPI1Q5T686 147 aa6.86□□□□□ -1.31
SLC46A1-201ENST00000578217 TSPO2Q5TGU0 170 aa6.86□□□□□ -1.31
SLC46A1-201ENST00000578217 OR7E24Q6IFN5 339 aa6.86□□□□□ -1.31
SLC46A1-201ENST00000578217 LETMD1Q6P1Q0 360 aa6.86□□□□□ -1.31
SLC46A1-201ENST00000578217 ANKRD16Q6P6B7 361 aa6.86□□□□□ -1.31
SLC46A1-201ENST00000578217 UGT2A3Q6UWM9 527 aa6.86□□□□□ -1.31
SLC46A1-201ENST00000578217 ZNF771Q7L3S4 317 aaPredicted RBP6.86□□□□□ -1.31
SLC46A1-201ENST00000578217 JAZF1Q86VZ6 243 aa6.86□□□□□ -1.31
SLC46A1-201ENST00000578217 FBXO36Q8NEA4 188 aa6.86□□□□□ -1.31
SLC46A1-201ENST00000578217 NANPQ8TBE9 248 aa6.86□□□□□ -1.31
SLC46A1-201ENST00000578217 GPR151Q8TDV0 419 aa6.86□□□□□ -1.31
SLC46A1-201ENST00000578217 C16orf78Q8WTQ4 265 aa6.86□□□□□ -1.31
SLC46A1-201ENST00000578217 CKAP2Q8WWK9 683 aa6.86□□□□□ -1.31
SLC46A1-201ENST00000578217 TMIGD2Q96BF3 282 aa6.86□□□□□ -1.31
SLC46A1-201ENST00000578217 ELP4Q96EB1 424 aa6.86□□□□□ -1.31
SLC46A1-201ENST00000578217 TSPAN17Q96FV3 270 aa6.86□□□□□ -1.31
SLC46A1-201ENST00000578217 SLC38A2Q96QD8 506 aa6.86□□□□□ -1.31
SLC46A1-201ENST00000578217 FAIM2Q9BWQ8 316 aa6.86□□□□□ -1.31
SLC46A1-201ENST00000578217 EBPLQ9BY08 206 aa6.86□□□□□ -1.31
SLC46A1-201ENST00000578217 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.86□□□□□ -1.31
SLC46A1-201ENST00000578217 SENP1Q9P0U3 644 aa6.86□□□□□ -1.31
SLC46A1-201ENST00000578217 CARD8Q9Y2G2 431 aa6.86□□□□□ -1.31
SLC46A1-201ENST00000578217 AMDHD2Q9Y303 409 aa6.86□□□□□ -1.31
SLC46A1-201ENST00000578217 STAB2Q8WWQ8 2551 aa6.85□□□□□ -1.31
SLC46A1-201ENST00000578217 ZNF503-AS2A6NEH8 195 aa6.85□□□□□ -1.31
SLC46A1-201ENST00000578217 NKX2-2O95096 273 aa6.85□□□□□ -1.31
SLC46A1-201ENST00000578217 PF4P02776 101 aa6.85□□□□□ -1.31
SLC46A1-201ENST00000578217 GFAPP14136 432 aa6.85□□□□□ -1.31
SLC46A1-201ENST00000578217 NPR2P20594 1047 aa6.85□□□□□ -1.31
SLC46A1-201ENST00000578217 PCGF2P35227 344 aa6.85□□□□□ -1.31
SLC46A1-201ENST00000578217 ARL1P40616 181 aaPredicted RBP6.85□□□□□ -1.31
SLC46A1-201ENST00000578217 EIF1P41567 113 aaKnown RBP6.85□□□□□ -1.31
SLC46A1-201ENST00000578217 SLC1A3P43003 542 aa6.85□□□□□ -1.31
SLC46A1-201ENST00000578217 ALDH18A1P54886 795 aaKnown RBP6.85□□□□□ -1.31
SLC46A1-201ENST00000578217 PRPS1P60891 318 aa6.85□□□□□ -1.31
SLC46A1-201ENST00000578217 TRA2BP62995 288 aaKnown RBP6.85□□□□□ -1.31
SLC46A1-201ENST00000578217 MYBPC1Q00872 1141 aa6.85□□□□□ -1.31
SLC46A1-201ENST00000578217 BAMBIQ13145 260 aa6.85□□□□□ -1.31
SLC46A1-201ENST00000578217 MAD2L1BPQ15013 274 aaPredicted RBP6.85□□□□□ -1.31
SLC46A1-201ENST00000578217 DUSP5Q16690 384 aa6.85□□□□□ -1.31
SLC46A1-201ENST00000578217 TTC19Q6DKK2 380 aaPredicted RBP6.85□□□□□ -1.31
SLC46A1-201ENST00000578217 CCBE1Q6UXH8 406 aaPredicted RBP6.85□□□□□ -1.31
SLC46A1-201ENST00000578217 LINGO2Q7L985 606 aa6.85□□□□□ -1.31
SLC46A1-201ENST00000578217 ZNF551Q7Z340 670 aaPredicted RBP6.85□□□□□ -1.31
SLC46A1-201ENST00000578217 RIBC1Q8N443 379 aaPredicted RBP6.85□□□□□ -1.31
SLC46A1-201ENST00000578217 OR4F6Q8NGB9 312 aa6.85□□□□□ -1.31
SLC46A1-201ENST00000578217 FAM110DQ8TAY7 271 aaPredicted RBP6.85□□□□□ -1.31
SLC46A1-201ENST00000578217 APIPQ96GX9 242 aa6.85□□□□□ -1.31
SLC46A1-201ENST00000578217 ARL5BQ96KC2 179 aa6.85□□□□□ -1.31
SLC46A1-201ENST00000578217 AMDHD1Q96NU7 426 aa6.85□□□□□ -1.31
SLC46A1-201ENST00000578217 GPR78Q96P69 363 aa6.85□□□□□ -1.31
SLC46A1-201ENST00000578217 BBS4Q96RK4 519 aa6.85□□□□□ -1.31
SLC46A1-201ENST00000578217 RBBP8Q99708 897 aa6.85□□□□□ -1.31
SLC46A1-201ENST00000578217 BAG1Q99933 345 aaPredicted RBP6.85□□□□□ -1.31
SLC46A1-201ENST00000578217 KATNB1Q9BVA0 655 aa6.85□□□□□ -1.31
SLC46A1-201ENST00000578217 TRIM5Q9C035 493 aa6.85□□□□□ -1.31
SLC46A1-201ENST00000578217 NELFAQ9H3P2 528 aa6.85□□□□□ -1.31
SLC46A1-201ENST00000578217 ZNF665Q9H7R5 613 aa6.85□□□□□ -1.31
SLC46A1-201ENST00000578217 NTN4Q9HB63 628 aa6.85□□□□□ -1.31
SLC46A1-201ENST00000578217 DYNLRB1Q9NP97 96 aa6.85□□□□□ -1.31
SLC46A1-201ENST00000578217 DDX18Q9NVP1 670 aaKnown RBP6.85□□□□□ -1.31
SLC46A1-201ENST00000578217 GIN1Q9NXP7 522 aa6.85□□□□□ -1.31
SLC46A1-201ENST00000578217 AHSPQ9NZD4 102 aa6.85□□□□□ -1.31
SLC46A1-201ENST00000578217 CPSF2Q9P2I0 782 aaKnown RBP6.85□□□□□ -1.31
SLC46A1-201ENST00000578217 MYEF2Q9P2K5 600 aaKnown RBP6.85□□□□□ -1.31
SLC46A1-201ENST00000578217 FBXO9Q9UK97 447 aaPredicted RBP6.85□□□□□ -1.31
SLC46A1-201ENST00000578217 PCTPQ9UKL6 214 aa6.85□□□□□ -1.31
SLC46A1-201ENST00000578217 MMP24Q9Y5R2 645 aa6.85□□□□□ -1.31
SLC46A1-201ENST00000578217 DYNC2H1Q8NCM8 4307 aaKnown RBP6.84□□□□□ -1.31
SLC46A1-201ENST00000578217 DNAH9Q9NYC9 4486 aa6.84□□□□□ -1.31
SLC46A1-201ENST00000578217 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.84□□□□□ -1.31
SLC46A1-201ENST00000578217 A0A0G2JMP0 313 aa6.84□□□□□ -1.31
SLC46A1-201ENST00000578217 A0A0X1KG70 313 aa6.84□□□□□ -1.31
SLC46A1-201ENST00000578217 MDFIC2A0A1B0GVS7 189 aa6.84□□□□□ -1.31
SLC46A1-201ENST00000578217 GJE1A6NN92 205 aa6.84□□□□□ -1.31
SLC46A1-201ENST00000578217 PPIHO43447 177 aaKnown RBP6.84□□□□□ -1.31
SLC46A1-201ENST00000578217 PCDH7O60245 1069 aa6.84□□□□□ -1.31
SLC46A1-201ENST00000578217 SKAP2O75563 359 aaPredicted RBP6.84□□□□□ -1.31
SLC46A1-201ENST00000578217 KCNH1O95259 989 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms