RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 GTF2IRD2BQ6EKJ0 949 aa8.51□□□□□ -1.05
NPLOC4-219ENST00000576713 EIF3MQ7L2H7 374 aaKnown RBP8.51□□□□□ -1.05
NPLOC4-219ENST00000576713 ADGRE4PQ86SQ3 457 aa8.51□□□□□ -1.05
NPLOC4-219ENST00000576713 GTF2IRD2Q86UP8 949 aa8.51□□□□□ -1.05
NPLOC4-219ENST00000576713 CCDC71Q8IV32 467 aaPredicted RBP8.51□□□□□ -1.05
NPLOC4-219ENST00000576713 LIX1LQ8IVB5 337 aa8.51□□□□□ -1.05
NPLOC4-219ENST00000576713 MISPQ8IVT2 679 aa8.51□□□□□ -1.05
NPLOC4-219ENST00000576713 UBQLNLQ8IYU4 475 aa8.51□□□□□ -1.05
NPLOC4-219ENST00000576713 GTPBP8Q8N3Z3 284 aaPredicted RBP8.51□□□□□ -1.05
NPLOC4-219ENST00000576713 LILRB2Q8N423 598 aa8.51□□□□□ -1.05
NPLOC4-219ENST00000576713 FITM2Q8N6M3 262 aa8.51□□□□□ -1.05
NPLOC4-219ENST00000576713 OR52P1PQ8NH57 321 aa8.51□□□□□ -1.05
NPLOC4-219ENST00000576713 OR5W2Q8NH69 310 aa8.51□□□□□ -1.05
NPLOC4-219ENST00000576713 OR10A6Q8NH74 314 aa8.51□□□□□ -1.05
NPLOC4-219ENST00000576713 WDR60Q8WVS4 1066 aa8.51□□□□□ -1.05
NPLOC4-219ENST00000576713 SMPDL3BQ92485 455 aa8.51□□□□□ -1.05
NPLOC4-219ENST00000576713 SARAFQ96BY9 339 aa8.51□□□□□ -1.05
NPLOC4-219ENST00000576713 ZNF845Q96IR2 970 aaPredicted RBP8.51□□□□□ -1.05
NPLOC4-219ENST00000576713 ADGRG7Q96K78 797 aa8.51□□□□□ -1.05
NPLOC4-219ENST00000576713 ZNF583Q96ND8 569 aa8.51□□□□□ -1.05
NPLOC4-219ENST00000576713 VKORC1Q9BQB6 163 aa8.51□□□□□ -1.05
NPLOC4-219ENST00000576713 TTYH2Q9BSA4 534 aa8.51□□□□□ -1.05
NPLOC4-219ENST00000576713 LAT2Q9GZY6 243 aa8.51□□□□□ -1.05
NPLOC4-219ENST00000576713 NSRP1Q9H0G5 558 aaKnown RBP8.51□□□□□ -1.05
NPLOC4-219ENST00000576713 TP63Q9H3D4 680 aaPredicted RBP8.51□□□□□ -1.05
NPLOC4-219ENST00000576713 TMEM38AQ9H6F2 299 aa8.51□□□□□ -1.05
NPLOC4-219ENST00000576713 BCL2L10Q9HD36 194 aa8.51□□□□□ -1.05
NPLOC4-219ENST00000576713 Q9UFV3 132 aa8.51□□□□□ -1.05
NPLOC4-219ENST00000576713 FREM3P0C091 2139 aa8.51□□□□□ -1.05
NPLOC4-219ENST00000576713 TMEM82A0PJX8 343 aa8.5□□□□□ -1.05
NPLOC4-219ENST00000576713 BBIP1A8MTZ0 92 aa8.5□□□□□ -1.05
NPLOC4-219ENST00000576713 GTPBP1O00178 669 aaKnown RBP8.5□□□□□ -1.05
NPLOC4-219ENST00000576713 NME4O00746 187 aa8.5□□□□□ -1.05
NPLOC4-219ENST00000576713 SEC14L5O43304 696 aa8.5□□□□□ -1.05
NPLOC4-219ENST00000576713 EIF4E2O60573 245 aaKnown RBP8.5□□□□□ -1.05
NPLOC4-219ENST00000576713 TPST2O60704 377 aa8.5□□□□□ -1.05
NPLOC4-219ENST00000576713 NUDT14O95848 222 aa8.5□□□□□ -1.05
NPLOC4-219ENST00000576713 TGM6O95932 706 aa8.5□□□□□ -1.05
NPLOC4-219ENST00000576713 OPN1SWP03999 348 aa8.5□□□□□ -1.05
NPLOC4-219ENST00000576713 DBIP07108 87 aaKnown RBP8.5□□□□□ -1.05
NPLOC4-219ENST00000576713 CD3EP07766 207 aa8.5□□□□□ -1.05
NPLOC4-219ENST00000576713 PABPC4LP0CB38 370 aaKnown RBP8.5□□□□□ -1.05
NPLOC4-219ENST00000576713 PPIBP23284 216 aaKnown RBP8.5□□□□□ -1.05
NPLOC4-219ENST00000576713 RYKP34925 604 aa8.5□□□□□ -1.05
NPLOC4-219ENST00000576713 ACAA2P42765 397 aaKnown RBP8.5□□□□□ -1.05
NPLOC4-219ENST00000576713 ANXA11P50995 505 aaKnown RBP8.5□□□□□ -1.05
NPLOC4-219ENST00000576713 CCR4P51679 360 aa8.5□□□□□ -1.05
NPLOC4-219ENST00000576713 TXNL4AP83876 142 aaKnown RBP8.5□□□□□ -1.05
NPLOC4-219ENST00000576713 HPCAP84074 193 aa8.5□□□□□ -1.05
NPLOC4-219ENST00000576713 DMTNQ08495 405 aa8.5□□□□□ -1.05
NPLOC4-219ENST00000576713 SPTAN1Q13813 2472 aaKnown RBP8.5□□□□□ -1.05
NPLOC4-219ENST00000576713 MMEL1Q495T6 779 aa8.5□□□□□ -1.05
NPLOC4-219ENST00000576713 SLC25A53Q5H9E4 307 aa8.5□□□□□ -1.05
NPLOC4-219ENST00000576713 SERPINA11Q86U17 422 aa8.5□□□□□ -1.05
NPLOC4-219ENST00000576713 SLC15A3Q8IY34 581 aa8.5□□□□□ -1.05
NPLOC4-219ENST00000576713 C9orf106Q8NAJ2 232 aa8.5□□□□□ -1.05
NPLOC4-219ENST00000576713 TNIP2Q8NFZ5 429 aa8.5□□□□□ -1.05
NPLOC4-219ENST00000576713 GPR32P1Q8NGA4 272 aa8.5□□□□□ -1.05
NPLOC4-219ENST00000576713 OR4D11Q8NGI4 311 aa8.5□□□□□ -1.05
NPLOC4-219ENST00000576713 RP9Q8TA86 221 aaKnown RBP8.5□□□□□ -1.05
NPLOC4-219ENST00000576713 DNAJA3Q96EY1 480 aa8.5□□□□□ -1.05
NPLOC4-219ENST00000576713 PTGES2Q9H7Z7 377 aa8.5□□□□□ -1.05
NPLOC4-219ENST00000576713 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.5□□□□□ -1.05
NPLOC4-219ENST00000576713 CLCF1Q9UBD9 225 aa8.5□□□□□ -1.05
NPLOC4-219ENST00000576713 RNF6Q9Y252 685 aa8.5□□□□□ -1.05
NPLOC4-219ENST00000576713 ARL2BPQ9Y2Y0 163 aa8.5□□□□□ -1.05
NPLOC4-219ENST00000576713 HRNRQ86YZ3 2850 aaPredicted RBP8.49□□□□□ -1.05
NPLOC4-219ENST00000576713 NCOA6Q14686 2063 aaPredicted RBP8.49□□□□□ -1.05
NPLOC4-219ENST00000576713 A0A087WZY1 265 aa8.49□□□□□ -1.05
NPLOC4-219ENST00000576713 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.49□□□□□ -1.05
NPLOC4-219ENST00000576713 A0A0J9YW62 118 aa8.49□□□□□ -1.05
NPLOC4-219ENST00000576713 CLCA1A8K7I4 914 aa8.49□□□□□ -1.05
NPLOC4-219ENST00000576713 EVPLLA8MZ36 301 aa8.49□□□□□ -1.05
NPLOC4-219ENST00000576713 H0Y3Z8 333 aa8.49□□□□□ -1.05
NPLOC4-219ENST00000576713 H3BNH8 94 aa8.49□□□□□ -1.05
NPLOC4-219ENST00000576713 C19orf84I3L1E1 186 aa8.49□□□□□ -1.05
NPLOC4-219ENST00000576713 WDR1O75083 606 aa8.49□□□□□ -1.05
NPLOC4-219ENST00000576713 FAM107AO95990 144 aa8.49□□□□□ -1.05
NPLOC4-219ENST00000576713 IFNGR1P15260 489 aa8.49□□□□□ -1.05
NPLOC4-219ENST00000576713 IL7RP16871 459 aa8.49□□□□□ -1.05
NPLOC4-219ENST00000576713 ZNF17P17021 662 aa8.49□□□□□ -1.05
NPLOC4-219ENST00000576713 POU3F2P20265 443 aaPredicted RBP8.49□□□□□ -1.05
NPLOC4-219ENST00000576713 HTR2AP28223 471 aa8.49□□□□□ -1.05
NPLOC4-219ENST00000576713 PCGF2P35227 344 aa8.49□□□□□ -1.05
NPLOC4-219ENST00000576713 SLC6A8P48029 635 aa8.49□□□□□ -1.05
NPLOC4-219ENST00000576713 NUDT2P50583 147 aa8.49□□□□□ -1.05
NPLOC4-219ENST00000576713 ZNF41P51814 821 aaPredicted RBP8.49□□□□□ -1.05
NPLOC4-219ENST00000576713 ZNF136P52737 540 aa8.49□□□□□ -1.05
NPLOC4-219ENST00000576713 SUMO3P55854 103 aaPredicted RBP8.49□□□□□ -1.05
NPLOC4-219ENST00000576713 DLX5P56178 289 aa8.49□□□□□ -1.05
NPLOC4-219ENST00000576713 SESN3P58005 492 aa8.49□□□□□ -1.05
NPLOC4-219ENST00000576713 EPS8Q12929 822 aa8.49□□□□□ -1.05
NPLOC4-219ENST00000576713 FOXF2Q12947 444 aa8.49□□□□□ -1.05
NPLOC4-219ENST00000576713 MAPRE2Q15555 327 aa8.49□□□□□ -1.05
NPLOC4-219ENST00000576713 NPTX1Q15818 432 aa8.49□□□□□ -1.05
NPLOC4-219ENST00000576713 DUSP7Q16829 419 aa8.49□□□□□ -1.05
NPLOC4-219ENST00000576713 CYP51A1Q16850 503 aa8.49□□□□□ -1.05
NPLOC4-219ENST00000576713 GLYR1Q49A26 553 aaPredicted RBP8.49□□□□□ -1.05
NPLOC4-219ENST00000576713 RNF220Q5VTB9 566 aa8.49□□□□□ -1.05
NPLOC4-219ENST00000576713 REEP3Q6NUK4 255 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms