RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 GPR68Q15743 365 aa10.2□□□□□ -0.78
CTDNEP1-212ENST00000576613 CARTPTQ16568 116 aa10.2□□□□□ -0.78
CTDNEP1-212ENST00000576613 IQCCQ4KMZ1 466 aa10.2□□□□□ -0.78
CTDNEP1-212ENST00000576613 KLHL24Q6TFL4 600 aa10.2□□□□□ -0.78
CTDNEP1-212ENST00000576613 CASP12Q6UXS9 341 aa10.2□□□□□ -0.78
CTDNEP1-212ENST00000576613 EIF3MQ7L2H7 374 aaKnown RBP10.2□□□□□ -0.78
CTDNEP1-212ENST00000576613 DDIASQ8IXT1 998 aa10.2□□□□□ -0.78
CTDNEP1-212ENST00000576613 RFLNBQ8N5W9 214 aa10.2□□□□□ -0.78
CTDNEP1-212ENST00000576613 OR7A2PQ8NGA2 310 aa10.2□□□□□ -0.78
CTDNEP1-212ENST00000576613 FBXO17Q96EF6 278 aa10.2□□□□□ -0.78
CTDNEP1-212ENST00000576613 SDF2Q99470 211 aa10.2□□□□□ -0.78
CTDNEP1-212ENST00000576613 PRPF18Q99633 342 aaKnown RBP10.2□□□□□ -0.78
CTDNEP1-212ENST00000576613 ACER3Q9NUN7 267 aa10.2□□□□□ -0.78
CTDNEP1-212ENST00000576613 PARPBPQ9NWS1 579 aa10.2□□□□□ -0.78
CTDNEP1-212ENST00000576613 UPB1Q9UBR1 384 aa10.2□□□□□ -0.78
CTDNEP1-212ENST00000576613 CHRNA9Q9UGM1 479 aa10.2□□□□□ -0.78
CTDNEP1-212ENST00000576613 DCTN4Q9UJW0 460 aa10.2□□□□□ -0.78
CTDNEP1-212ENST00000576613 SLC9A8Q9Y2E8 581 aa10.2□□□□□ -0.78
CTDNEP1-212ENST00000576613 HDGFL3Q9Y3E1 203 aa10.2□□□□□ -0.78
CTDNEP1-212ENST00000576613 KCNE3Q9Y6H6 103 aa10.2□□□□□ -0.78
CTDNEP1-212ENST00000576613 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.2□□□□□ -0.781e-7■□□□□ 8.6
CTDNEP1-212ENST00000576613 ATP6V1G2-DDX39BF2Z307 99 aa10.19□□□□□ -0.78
CTDNEP1-212ENST00000576613 CFLARO15519 480 aa10.19□□□□□ -0.78
CTDNEP1-212ENST00000576613 PLIN3O60664 434 aa10.19□□□□□ -0.78
CTDNEP1-212ENST00000576613 LYPLA1O75608 230 aaPredicted RBP10.19□□□□□ -0.78
CTDNEP1-212ENST00000576613 URI1O94763 535 aaPredicted RBP10.19□□□□□ -0.78
CTDNEP1-212ENST00000576613 C6orf47O95873 294 aa10.19□□□□□ -0.78
CTDNEP1-212ENST00000576613 WNT11O96014 354 aa10.19□□□□□ -0.78
CTDNEP1-212ENST00000576613 LAMP1P11279 417 aa10.19□□□□□ -0.78
CTDNEP1-212ENST00000576613 ZNF23P17027 643 aa10.19□□□□□ -0.78
CTDNEP1-212ENST00000576613 SOAT1P35610 550 aa10.19□□□□□ -0.78
CTDNEP1-212ENST00000576613 CLK1P49759 484 aaKnown RBP10.19□□□□□ -0.78
CTDNEP1-212ENST00000576613 PRPS1P60891 318 aa10.19□□□□□ -0.78
CTDNEP1-212ENST00000576613 RUNX1T1Q06455 604 aa10.19□□□□□ -0.78
CTDNEP1-212ENST00000576613 ZNF141Q15928 474 aa10.19□□□□□ -0.78
CTDNEP1-212ENST00000576613 SWI5Q1ZZU3 235 aa10.19□□□□□ -0.78
CTDNEP1-212ENST00000576613 CR1LQ2VPA4 569 aa10.19□□□□□ -0.78
CTDNEP1-212ENST00000576613 KANK2Q63ZY3 851 aa10.19□□□□□ -0.78
CTDNEP1-212ENST00000576613 SLC46A3Q7Z3Q1 461 aa10.19□□□□□ -0.78
CTDNEP1-212ENST00000576613 WDR31Q8NA23 367 aa10.19□□□□□ -0.78
CTDNEP1-212ENST00000576613 NOA1Q8NC60 698 aaKnown RBP10.19□□□□□ -0.78
CTDNEP1-212ENST00000576613 MNS1Q8NEH6 495 aa10.19□□□□□ -0.78
CTDNEP1-212ENST00000576613 OR52E4Q8NGH9 312 aa10.19□□□□□ -0.78
CTDNEP1-212ENST00000576613 OR5D16Q8NGK9 328 aa10.19□□□□□ -0.78
CTDNEP1-212ENST00000576613 ZNF563Q8TA94 476 aa10.19□□□□□ -0.78
CTDNEP1-212ENST00000576613 MZB1Q8WU39 189 aa10.19□□□□□ -0.78
CTDNEP1-212ENST00000576613 OIT3Q8WWZ8 545 aa10.19□□□□□ -0.78
CTDNEP1-212ENST00000576613 SORCS2Q96PQ0 1159 aa10.19□□□□□ -0.78
CTDNEP1-212ENST00000576613 KCNS3Q9BQ31 491 aa10.19□□□□□ -0.78
CTDNEP1-212ENST00000576613 CCDC106Q9BWC9 280 aa10.19□□□□□ -0.78
CTDNEP1-212ENST00000576613 TUBB1Q9H4B7 451 aa10.19□□□□□ -0.78
CTDNEP1-212ENST00000576613 SLC17A5Q9NRA2 495 aa10.19□□□□□ -0.78
CTDNEP1-212ENST00000576613 MID2Q9UJV3 735 aa10.19□□□□□ -0.78
CTDNEP1-212ENST00000576613 MOKQ9UQ07 419 aa10.19□□□□□ -0.78
CTDNEP1-212ENST00000576613 DNAJC15Q9Y5T4 150 aa10.19□□□□□ -0.78
CTDNEP1-212ENST00000576613 ARFGEF3Q5TH69 2177 aa10.18□□□□□ -0.78
CTDNEP1-212ENST00000576613 IGHV4-61A0A0C4DH41 118 aa10.18□□□□□ -0.78
CTDNEP1-212ENST00000576613 A0A1W2PPM1 405 aa10.18□□□□□ -0.78
CTDNEP1-212ENST00000576613 PDLIM1O00151 329 aa10.18□□□□□ -0.78
CTDNEP1-212ENST00000576613 EIF1BO60739 113 aaKnown RBP10.18□□□□□ -0.78
CTDNEP1-212ENST00000576613 UGT2B17O75795 530 aa10.18□□□□□ -0.78
CTDNEP1-212ENST00000576613 NTF4P34130 210 aa10.18□□□□□ -0.78
CTDNEP1-212ENST00000576613 CRHR1P34998 444 aa10.18□□□□□ -0.78
CTDNEP1-212ENST00000576613 FOXG1P55316 489 aaPredicted RBP10.18□□□□□ -0.78
CTDNEP1-212ENST00000576613 OR2B6P58173 313 aa10.18□□□□□ -0.78
CTDNEP1-212ENST00000576613 PTGR1Q14914 329 aa10.18□□□□□ -0.78
CTDNEP1-212ENST00000576613 C9orf135Q5VTT2 229 aa10.18□□□□□ -0.78
CTDNEP1-212ENST00000576613 C16orf62Q7Z3J2 963 aa10.18□□□□□ -0.78
CTDNEP1-212ENST00000576613 GRINAQ7Z429 371 aa10.18□□□□□ -0.78
CTDNEP1-212ENST00000576613 MEX3DQ86XN8 651 aaKnown RBP10.18□□□□□ -0.78
CTDNEP1-212ENST00000576613 C17orf53Q8N3J3 647 aaPredicted RBP10.18□□□□□ -0.78
CTDNEP1-212ENST00000576613 OR5AK3PQ8NH89 298 aa10.18□□□□□ -0.78
CTDNEP1-212ENST00000576613 TWIST2Q8WVJ9 160 aa10.18□□□□□ -0.78
CTDNEP1-212ENST00000576613 ARL5BQ96KC2 179 aa10.18□□□□□ -0.78
CTDNEP1-212ENST00000576613 PPP3R2Q96LZ3 170 aa10.18□□□□□ -0.78
CTDNEP1-212ENST00000576613 FOXN4Q96NZ1 517 aa10.18□□□□□ -0.78
CTDNEP1-212ENST00000576613 VRK1Q99986 396 aaPredicted RBP10.18□□□□□ -0.78
CTDNEP1-212ENST00000576613 BHLHE41Q9C0J9 482 aaPredicted RBP10.18□□□□□ -0.78
CTDNEP1-212ENST00000576613 C12orf65Q9H3J6 166 aaKnown RBP10.18□□□□□ -0.78
CTDNEP1-212ENST00000576613 CTPS2Q9NRF8 586 aa10.18□□□□□ -0.78
CTDNEP1-212ENST00000576613 EXD2Q9NVH0 621 aa10.18□□□□□ -0.78
CTDNEP1-212ENST00000576613 TMEM181Q9P2C4 612 aa10.18□□□□□ -0.78
CTDNEP1-212ENST00000576613 FBXO9Q9UK97 447 aaPredicted RBP10.18□□□□□ -0.78
CTDNEP1-212ENST00000576613 MKLN1Q9UL63 735 aa10.18□□□□□ -0.78
CTDNEP1-212ENST00000576613 TRAPPC4Q9Y296 219 aa10.18□□□□□ -0.78
CTDNEP1-212ENST00000576613 SLC35A3Q9Y2D2 325 aa10.18□□□□□ -0.78
CTDNEP1-212ENST00000576613 COPEO14579 308 aa10.17□□□□□ -0.78
CTDNEP1-212ENST00000576613 PIP5K1BO14986 540 aa10.17□□□□□ -0.78
CTDNEP1-212ENST00000576613 FCMRO60667 390 aa10.17□□□□□ -0.78
CTDNEP1-212ENST00000576613 ERCC1P07992 297 aaPredicted RBP10.17□□□□□ -0.78
CTDNEP1-212ENST00000576613 PRPS1L1P21108 318 aa10.17□□□□□ -0.78
CTDNEP1-212ENST00000576613 MATN1P21941 496 aa10.17□□□□□ -0.78
CTDNEP1-212ENST00000576613 MPGP29372 298 aa10.17□□□□□ -0.78
CTDNEP1-212ENST00000576613 SERPINF1P36955 418 aa10.17□□□□□ -0.78
CTDNEP1-212ENST00000576613 SRP14P37108 136 aaKnown RBP10.17□□□□□ -0.78
CTDNEP1-212ENST00000576613 RPS26P62854 115 aaKnown RBP10.17□□□□□ -0.78
CTDNEP1-212ENST00000576613 H3F3AP84243 136 aa10.17□□□□□ -0.78
CTDNEP1-212ENST00000576613 SLC25A3Q00325 362 aa10.17□□□□□ -0.78
CTDNEP1-212ENST00000576613 MST1LQ2TV78 715 aa10.17□□□□□ -0.78
CTDNEP1-212ENST00000576613 ARHGAP11BQ3KRB8 267 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms