RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 FBXL4Q9UKA2 621 aa12.88□□□□□ -0.35
VPS33B-208ENST00000574755 ATXN7L1Q9ULK2 861 aaPredicted RBP12.88□□□□□ -0.35
VPS33B-208ENST00000574755 CAB39Q9Y376 341 aaPredicted RBP12.88□□□□□ -0.35
VPS33B-208ENST00000574755 PI4KAP42356 2102 aa12.88□□□□□ -0.35
VPS33B-208ENST00000574755 DAPL1A0PJW8 107 aa12.87□□□□□ -0.35
VPS33B-208ENST00000574755 CDC14CA4D256 554 aa12.87□□□□□ -0.35
VPS33B-208ENST00000574755 AGRPO00253 132 aa12.87□□□□□ -0.35
VPS33B-208ENST00000574755 ZNF264O43296 627 aa12.87□□□□□ -0.35
VPS33B-208ENST00000574755 MRPL3P09001 348 aaKnown RBP12.87□□□□□ -0.35
VPS33B-208ENST00000574755 SDC2P34741 201 aa12.87□□□□□ -0.35
VPS33B-208ENST00000574755 ADH7P40394 386 aa12.87□□□□□ -0.35
VPS33B-208ENST00000574755 TGM4P49221 684 aa12.87□□□□□ -0.35
VPS33B-208ENST00000574755 ZNF181Q2M3W8 571 aa12.87□□□□□ -0.35
VPS33B-208ENST00000574755 FNDC7Q5VTL7 733 aa12.87□□□□□ -0.35
VPS33B-208ENST00000574755 HLA-DQA1Q5Y7H0 255 aa12.87□□□□□ -0.35
VPS33B-208ENST00000574755 WBP2NLQ6ICG8 309 aa12.87□□□□□ -0.35
VPS33B-208ENST00000574755 LYSMD2Q8IV50 215 aa12.87□□□□□ -0.35
VPS33B-208ENST00000574755 TMEM99Q8N816 258 aa12.87□□□□□ -0.35
VPS33B-208ENST00000574755 MINDY2Q8NBR6 621 aa12.87□□□□□ -0.35
VPS33B-208ENST00000574755 OR10H4Q8NGA5 316 aa12.87□□□□□ -0.35
VPS33B-208ENST00000574755 OR5M3Q8NGP4 307 aa12.87□□□□□ -0.35
VPS33B-208ENST00000574755 NUDT9Q9BW91 350 aa12.87□□□□□ -0.35
VPS33B-208ENST00000574755 ISG20L2Q9H9L3 353 aaKnown RBP12.87□□□□□ -0.35
VPS33B-208ENST00000574755 COPS7AQ9UBW8 275 aa12.87□□□□□ -0.35
VPS33B-208ENST00000574755 ICAM5Q9UMF0 924 aa12.87□□□□□ -0.35
VPS33B-208ENST00000574755 FUOMA2VDF0 154 aa12.87□□□□□ -0.35
VPS33B-208ENST00000574755 CPED1A4D0V7 1026 aa12.87□□□□□ -0.35
VPS33B-208ENST00000574755 ELOA3DA6NLF2 546 aaPredicted RBP12.87□□□□□ -0.35
VPS33B-208ENST00000574755 PPM1BO75688 479 aa12.87□□□□□ -0.35
VPS33B-208ENST00000574755 GYPBP06028 91 aa12.87□□□□□ -0.35
VPS33B-208ENST00000574755 TGM1P22735 817 aa12.87□□□□□ -0.35
VPS33B-208ENST00000574755 EPHA8P29322 1005 aaPredicted RBP12.87□□□□□ -0.35
VPS33B-208ENST00000574755 RPL4P36578 427 aaKnown RBP12.87□□□□□ -0.35
VPS33B-208ENST00000574755 ETV6P41212 452 aa12.87□□□□□ -0.35
VPS33B-208ENST00000574755 RANBP1P43487 201 aa12.87□□□□□ -0.35
VPS33B-208ENST00000574755 HNRNPA0Q13151 305 aaKnown RBP12.87□□□□□ -0.35
VPS33B-208ENST00000574755 SKP2Q13309 424 aa12.87□□□□□ -0.35
VPS33B-208ENST00000574755 EBPQ15125 230 aaKnown RBP12.87□□□□□ -0.35
VPS33B-208ENST00000574755 ELOA3BQ3SY89 546 aa12.87□□□□□ -0.35
VPS33B-208ENST00000574755 YOD1Q5VVQ6 348 aaPredicted RBP12.87□□□□□ -0.35
VPS33B-208ENST00000574755 CD200R1LQ6Q8B3 271 aa12.87□□□□□ -0.35
VPS33B-208ENST00000574755 APOOLQ6UXV4 268 aa12.87□□□□□ -0.35
VPS33B-208ENST00000574755 CCDC190Q86UF4 302 aa12.87□□□□□ -0.35
VPS33B-208ENST00000574755 SYT14Q8NB59 555 aa12.87□□□□□ -0.35
VPS33B-208ENST00000574755 C7orf57Q8NEG2 295 aa12.87□□□□□ -0.35
VPS33B-208ENST00000574755 SDR9C7Q8NEX9 313 aa12.87□□□□□ -0.35
VPS33B-208ENST00000574755 ATP6V1C2Q8NEY4 427 aa12.87□□□□□ -0.35
VPS33B-208ENST00000574755 ELOA3Q8NG57 546 aa12.87□□□□□ -0.35
VPS33B-208ENST00000574755 OR52E2Q8NGJ4 325 aa12.87□□□□□ -0.35
VPS33B-208ENST00000574755 OR14A16Q8NHC5 309 aa12.87□□□□□ -0.35
VPS33B-208ENST00000574755 OIT3Q8WWZ8 545 aa12.87□□□□□ -0.35
VPS33B-208ENST00000574755 ART5Q96L15 291 aa12.87□□□□□ -0.35
VPS33B-208ENST00000574755 SLC30A2Q9BRI3 323 aa12.87□□□□□ -0.35
VPS33B-208ENST00000574755 DUSP23Q9BVJ7 150 aa12.87□□□□□ -0.35
VPS33B-208ENST00000574755 VN1R1Q9GZP7 353 aa12.87□□□□□ -0.35
VPS33B-208ENST00000574755 MPDZO75970 2070 aa12.86□□□□□ -0.35
VPS33B-208ENST00000574755 CCDC182A6NF36 153 aa12.86□□□□□ -0.35
VPS33B-208ENST00000574755 MCIDASD6RGH6 385 aa12.86□□□□□ -0.35
VPS33B-208ENST00000574755 OIP5O43482 229 aa12.86□□□□□ -0.35
VPS33B-208ENST00000574755 HNRNPCP07910 306 aaKnown RBP eCLIP12.86□□□□□ -0.35
VPS33B-208ENST00000574755 SLC2A5P22732 501 aa12.86□□□□□ -0.35
VPS33B-208ENST00000574755 GTF2E2P29084 291 aaKnown RBP12.86□□□□□ -0.35
VPS33B-208ENST00000574755 IL12BP29460 328 aa12.86□□□□□ -0.35
VPS33B-208ENST00000574755 FGF9P31371 208 aaPredicted RBP12.86□□□□□ -0.35
VPS33B-208ENST00000574755 TNFSF8P32971 234 aa12.86□□□□□ -0.35
VPS33B-208ENST00000574755 STEAP3Q658P3 488 aa12.86□□□□□ -0.35
VPS33B-208ENST00000574755 DESI1Q6ICB0 168 aa12.86□□□□□ -0.35
VPS33B-208ENST00000574755 TMEM71Q6P5X7 295 aa12.86□□□□□ -0.35
VPS33B-208ENST00000574755 TMPRSS9Q7Z410 1059 aa12.86□□□□□ -0.35
VPS33B-208ENST00000574755 SLC22A16Q86VW1 577 aa12.86□□□□□ -0.35
VPS33B-208ENST00000574755 C9orf40Q8IXQ3 194 aa12.86□□□□□ -0.35
VPS33B-208ENST00000574755 FAM98AQ8NCA5 519 aaKnown RBP12.86□□□□□ -0.35
VPS33B-208ENST00000574755 FAM83FQ8NEG4 500 aaPredicted RBP12.86□□□□□ -0.35
VPS33B-208ENST00000574755 PPP1R14BQ96C90 147 aa12.86□□□□□ -0.35
VPS33B-208ENST00000574755 HDHD5Q9BXW7 423 aa12.86□□□□□ -0.35
VPS33B-208ENST00000574755 CTSFQ9UBX1 484 aa12.86□□□□□ -0.35
VPS33B-208ENST00000574755 CHRNA9Q9UGM1 479 aa12.86□□□□□ -0.35
VPS33B-208ENST00000574755 PCDHGB6Q9Y5F9 930 aa12.86□□□□□ -0.35
VPS33B-208ENST00000574755 IQCMA0A1B0GVH7 501 aa12.86□□□□□ -0.35
VPS33B-208ENST00000574755 ISPDA4D126 451 aa12.86□□□□□ -0.35
VPS33B-208ENST00000574755 ICOSLGO75144 302 aa12.86□□□□□ -0.35
VPS33B-208ENST00000574755 HLA-DPB1P04440 258 aa12.86□□□□□ -0.35
VPS33B-208ENST00000574755 CLEC2LP0C7M8 214 aa12.86□□□□□ -0.35
VPS33B-208ENST00000574755 PNMTP11086 282 aa12.86□□□□□ -0.35
VPS33B-208ENST00000574755 HIST1H1CP16403 213 aaKnown RBP12.86□□□□□ -0.35
VPS33B-208ENST00000574755 BCAP31P51572 246 aa12.86□□□□□ -0.35
VPS33B-208ENST00000574755 NR0B1P51843 470 aaKnown RBP12.86□□□□□ -0.35
VPS33B-208ENST00000574755 DCAF7P61962 342 aa12.86□□□□□ -0.35
VPS33B-208ENST00000574755 GALEQ14376 348 aa12.86□□□□□ -0.35
VPS33B-208ENST00000574755 GXYLT1Q4G148 440 aa12.86□□□□□ -0.35
VPS33B-208ENST00000574755 GUSBP11Q6P575 273 aa12.86□□□□□ -0.35
VPS33B-208ENST00000574755 SHISA6Q6ZSJ9 500 aa12.86□□□□□ -0.35
VPS33B-208ENST00000574755 ZNF554Q86TJ5 538 aa12.86□□□□□ -0.35
VPS33B-208ENST00000574755 OR4K13Q8NH42 304 aa12.86□□□□□ -0.35
VPS33B-208ENST00000574755 SLC19A3Q9BZV2 496 aa12.86□□□□□ -0.35
VPS33B-208ENST00000574755 EXOSC3Q9NQT5 275 aaKnown RBP12.86□□□□□ -0.35
VPS33B-208ENST00000574755 FSCN3Q9NQT6 498 aa12.86□□□□□ -0.35
VPS33B-208ENST00000574755 MUTYHQ9UIF7 546 aa12.86□□□□□ -0.35
VPS33B-208ENST00000574755 ZNF337Q9Y3M9 751 aa12.86□□□□□ -0.35
VPS33B-208ENST00000574755 ADAM18Q9Y3Q7 739 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms