RNA–Protein interactions for RNA: ENST00000573474.5

CCDC40-209, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 554 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-209ENST00000573474 HAS2Q92819 552 aa12.42□□□□□ -0.42
CCDC40-209ENST00000573474 SGTBQ96EQ0 304 aa12.42□□□□□ -0.42
CCDC40-209ENST00000573474 HRASLS5Q96KN8 279 aa12.42□□□□□ -0.42
CCDC40-209ENST00000573474 MRGPRX4Q96LA9 322 aa12.42□□□□□ -0.42
CCDC40-209ENST00000573474 MUS81Q96NY9 551 aa12.42□□□□□ -0.42
CCDC40-209ENST00000573474 SIGLEC12Q96PQ1 595 aa12.42□□□□□ -0.42
CCDC40-209ENST00000573474 PITX2Q99697 317 aa12.42□□□□□ -0.42
CCDC40-209ENST00000573474 DOCK10Q96BY6 2186 aa12.42□□□□□ -0.42
CCDC40-209ENST00000573474 PIEZO1Q92508 2521 aa12.41□□□□□ -0.42
CCDC40-209ENST00000573474 OR5H15A6NDH6 313 aa12.41□□□□□ -0.42
CCDC40-209ENST00000573474 ENO4A6NNW6 628 aa12.41□□□□□ -0.42
CCDC40-209ENST00000573474 H3BN98 237 aa12.41□□□□□ -0.42
CCDC40-209ENST00000573474 CDC42EP2O14613 210 aa12.41□□□□□ -0.42
CCDC40-209ENST00000573474 SUSD5O60279 629 aa12.41□□□□□ -0.42
CCDC40-209ENST00000573474 SLC25A12O75746 678 aa12.41□□□□□ -0.42
CCDC40-209ENST00000573474 CEACAM4O75871 244 aa12.41□□□□□ -0.42
CCDC40-209ENST00000573474 SOX14O95416 240 aa12.41□□□□□ -0.42
CCDC40-209ENST00000573474 CLIC3O95833 236 aa12.41□□□□□ -0.42
CCDC40-209ENST00000573474 POU1F1P28069 291 aa12.41□□□□□ -0.42
CCDC40-209ENST00000573474 EPHA2P29317 976 aa12.41□□□□□ -0.42
CCDC40-209ENST00000573474 PLA2G5P39877 138 aa12.41□□□□□ -0.42
CCDC40-209ENST00000573474 EIF1P41567 113 aaKnown RBP12.41□□□□□ -0.42
CCDC40-209ENST00000573474 DNASE1L1P49184 302 aa12.41□□□□□ -0.42
CCDC40-209ENST00000573474 MAP2K6P52564 334 aa12.41□□□□□ -0.42
CCDC40-209ENST00000573474 DSCR4P56555 118 aaPredicted RBP12.41□□□□□ -0.42
CCDC40-209ENST00000573474 PTGES3Q15185 160 aaKnown RBP12.41□□□□□ -0.42
CCDC40-209ENST00000573474 ZNF691Q5VV52 312 aa12.41□□□□□ -0.42
CCDC40-209ENST00000573474 KRT80Q6KB66 452 aa12.41□□□□□ -0.42
CCDC40-209ENST00000573474 POMZP3Q6PJE2 187 aa12.41□□□□□ -0.42
CCDC40-209ENST00000573474 C5orf46Q6UWT4 87 aa12.41□□□□□ -0.42
CCDC40-209ENST00000573474 CCDC81Q6ZN84 652 aa12.41□□□□□ -0.42
CCDC40-209ENST00000573474 THAP5Q7Z6K1 395 aa12.41□□□□□ -0.42
CCDC40-209ENST00000573474 KIF18BQ86Y91 864 aa12.41□□□□□ -0.42
CCDC40-209ENST00000573474 C8orf59Q8N0T1 100 aaPredicted RBP12.41□□□□□ -0.42
CCDC40-209ENST00000573474 CLDN22Q8N7P3 220 aa12.41□□□□□ -0.42
CCDC40-209ENST00000573474 SETD9Q8NE22 299 aa12.41□□□□□ -0.42
CCDC40-209ENST00000573474 STK35Q8TDR2 534 aa12.41□□□□□ -0.42
CCDC40-209ENST00000573474 ZBTB8AQ96BR9 441 aa12.41□□□□□ -0.42
CCDC40-209ENST00000573474 DTNBP1Q96EV8 351 aa12.41□□□□□ -0.42
CCDC40-209ENST00000573474 JSRP1Q96MG2 331 aaPredicted RBP12.41□□□□□ -0.42
CCDC40-209ENST00000573474 GNRHR2Q96P88 292 aa12.41□□□□□ -0.42
CCDC40-209ENST00000573474 NR1H4Q96RI1 486 aaPredicted RBP12.41□□□□□ -0.42
CCDC40-209ENST00000573474 APOL4Q9BPW4 351 aa12.41□□□□□ -0.42
CCDC40-209ENST00000573474 FAM173AQ9BQD7 235 aa12.41□□□□□ -0.42
CCDC40-209ENST00000573474 UBAP1Q9NZ09 502 aa12.41□□□□□ -0.42
CCDC40-209ENST00000573474 VDAC3Q9Y277 283 aa12.41□□□□□ -0.42
CCDC40-209ENST00000573474 KCNMB2Q9Y691 235 aa12.41□□□□□ -0.42
CCDC40-209ENST00000573474 HSPE1-MOB4S4R3N1 261 aa12.41□□□□□ -0.42
CCDC40-209ENST00000573474 TRAV36DV7A0A075B6V5 113 aa12.4□□□□□ -0.42
CCDC40-209ENST00000573474 A0A0G2JMM0 328 aa12.4□□□□□ -0.42
CCDC40-209ENST00000573474 A0A1W2PPB8 328 aa12.4□□□□□ -0.42
CCDC40-209ENST00000573474 A0A1W2PRS3 328 aa12.4□□□□□ -0.42
CCDC40-209ENST00000573474 TMEM72A0PK05 275 aa12.4□□□□□ -0.42
CCDC40-209ENST00000573474 ZAR1LA6NP61 321 aa12.4□□□□□ -0.42
CCDC40-209ENST00000573474 A8MVM7 634 aa12.4□□□□□ -0.42
CCDC40-209ENST00000573474 KIR3DP1A8MWS1 328 aa12.4□□□□□ -0.42
CCDC40-209ENST00000573474 OR7A10O76100 309 aa12.4□□□□□ -0.42
CCDC40-209ENST00000573474 RCBTB2O95199 551 aa12.4□□□□□ -0.42
CCDC40-209ENST00000573474 SP1P08047 785 aa12.4□□□□□ -0.42
CCDC40-209ENST00000573474 ADRB1P08588 477 aa12.4□□□□□ -0.42
CCDC40-209ENST00000573474 IGFBP1P08833 259 aaPredicted RBP12.4□□□□□ -0.42
CCDC40-209ENST00000573474 SAGP10523 405 aaPredicted RBP12.4□□□□□ -0.42
CCDC40-209ENST00000573474 CCNA2P20248 432 aa12.4□□□□□ -0.42
CCDC40-209ENST00000573474 DPP4P27487 766 aa12.4□□□□□ -0.42
CCDC40-209ENST00000573474 ADH6P28332 368 aa12.4□□□□□ -0.42
CCDC40-209ENST00000573474 GGT2P36268 569 aa12.4□□□□□ -0.42
CCDC40-209ENST00000573474 EIF2S3P41091 472 aaKnown RBP12.4□□□□□ -0.42
CCDC40-209ENST00000573474 SLC9A3P48764 834 aa12.4□□□□□ -0.42
CCDC40-209ENST00000573474 EGR4Q05215 589 aa12.4□□□□□ -0.42
CCDC40-209ENST00000573474 FOXF1Q12946 379 aa12.4□□□□□ -0.42
CCDC40-209ENST00000573474 GLYR1Q49A26 553 aaPredicted RBP12.4□□□□□ -0.42
CCDC40-209ENST00000573474 SLC25A25Q6KCM7 469 aa12.4□□□□□ -0.42
CCDC40-209ENST00000573474 IGFL2Q6UWQ7 119 aa12.4□□□□□ -0.42
CCDC40-209ENST00000573474 Q6ZPB1 254 aaPredicted RBP12.4□□□□□ -0.42
CCDC40-209ENST00000573474 MDS2Q8NDY4 140 aa12.4□□□□□ -0.42
CCDC40-209ENST00000573474 FDCSPQ8NFU4 85 aa12.4□□□□□ -0.42
CCDC40-209ENST00000573474 POC1BQ8TC44 478 aa12.4□□□□□ -0.42
CCDC40-209ENST00000573474 OSTF1Q92882 214 aa12.4□□□□□ -0.42
CCDC40-209ENST00000573474 ZFP64Q9NPA5 681 aa12.4□□□□□ -0.42
CCDC40-209ENST00000573474 SERINC1Q9NRX5 453 aa12.4□□□□□ -0.42
CCDC40-209ENST00000573474 DEPPQ9NTK1 212 aa12.4□□□□□ -0.42
CCDC40-209ENST00000573474 IL20Q9NYY1 176 aa12.4□□□□□ -0.42
CCDC40-209ENST00000573474 CHRNA9Q9UGM1 479 aa12.4□□□□□ -0.42
CCDC40-209ENST00000573474 BOKQ9UMX3 212 aaPredicted RBP12.4□□□□□ -0.42
CCDC40-209ENST00000573474 CDH10Q9Y6N8 788 aa12.4□□□□□ -0.42
CCDC40-209ENST00000573474 AKAP13Q12802 2813 aa12.4□□□□□ -0.42
CCDC40-209ENST00000573474 SPTBN2O15020 2390 aa12.39□□□□□ -0.43
CCDC40-209ENST00000573474 RRP8O43159 456 aaKnown RBP12.39□□□□□ -0.43
CCDC40-209ENST00000573474 ZNF208O43345 1280 aa12.39□□□□□ -0.43
CCDC40-209ENST00000573474 HCN1O60741 890 aa12.39□□□□□ -0.43
CCDC40-209ENST00000573474 PTP4A3O75365 173 aa12.39□□□□□ -0.43
CCDC40-209ENST00000573474 WISP1O95388 367 aa12.39□□□□□ -0.43
CCDC40-209ENST00000573474 CH25HO95992 272 aa12.39□□□□□ -0.43
CCDC40-209ENST00000573474 CD46P15529 392 aa12.39□□□□□ -0.43
CCDC40-209ENST00000573474 HK1P19367 917 aa12.39□□□□□ -0.43
CCDC40-209ENST00000573474 FUT1P19526 365 aa12.39□□□□□ -0.43
CCDC40-209ENST00000573474 FKBP2P26885 142 aaKnown RBP12.39□□□□□ -0.43
CCDC40-209ENST00000573474 GIPRP48546 466 aa12.39□□□□□ -0.43
CCDC40-209ENST00000573474 NUP107P57740 925 aa12.39□□□□□ -0.43
CCDC40-209ENST00000573474 GPR85P60893 370 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms