RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 HTR3AP46098 478 aa8.56□□□□□ -1.04
NPLOC4-212ENST00000573328 PTH2RP49190 550 aa8.56□□□□□ -1.04
NPLOC4-212ENST00000573328 OR2B6P58173 313 aa8.56□□□□□ -1.04
NPLOC4-212ENST00000573328 P2RY6Q15077 328 aa8.56□□□□□ -1.04
NPLOC4-212ENST00000573328 TAB1Q15750 504 aa8.56□□□□□ -1.04
NPLOC4-212ENST00000573328 GSTA3Q16772 222 aa8.56□□□□□ -1.04
NPLOC4-212ENST00000573328 PDCD4Q53EL6 469 aaKnown RBP8.56□□□□□ -1.04
NPLOC4-212ENST00000573328 COX20Q5RI15 118 aa8.56□□□□□ -1.04
NPLOC4-212ENST00000573328 C6orf10Q5SRN2 563 aa8.56□□□□□ -1.04
NPLOC4-212ENST00000573328 MRPL2Q5T653 305 aaKnown RBP8.56□□□□□ -1.04
NPLOC4-212ENST00000573328 ABLIM2Q6H8Q1 611 aa8.56□□□□□ -1.04
NPLOC4-212ENST00000573328 CLEC9AQ6UXN8 241 aa8.56□□□□□ -1.04
NPLOC4-212ENST00000573328 LRRC74BQ6ZQY2 392 aa8.56□□□□□ -1.04
NPLOC4-212ENST00000573328 Q6ZT83 130 aa8.56□□□□□ -1.04
NPLOC4-212ENST00000573328 KRTAP1-3Q8IUG1 177 aa8.56□□□□□ -1.04
NPLOC4-212ENST00000573328 CMIPQ8IY22 773 aa8.56□□□□□ -1.04
NPLOC4-212ENST00000573328 PEX5LQ8IYB4 626 aa8.56□□□□□ -1.04
NPLOC4-212ENST00000573328 PIGXQ8TBF5 258 aa8.56□□□□□ -1.04
NPLOC4-212ENST00000573328 PIWIL2Q8TC59 973 aaKnown RBP8.56□□□□□ -1.04
NPLOC4-212ENST00000573328 HSD17B8Q92506 261 aa8.56□□□□□ -1.04
NPLOC4-212ENST00000573328 CNOT9Q92600 299 aaKnown RBP8.56□□□□□ -1.04
NPLOC4-212ENST00000573328 AKAP1Q92667 903 aaKnown RBP eCLIP8.56□□□□□ -1.04
NPLOC4-212ENST00000573328 DDIT4LQ96D03 193 aa8.56□□□□□ -1.04
NPLOC4-212ENST00000573328 ZG16BQ96DA0 208 aa8.56□□□□□ -1.04
NPLOC4-212ENST00000573328 SMR3AQ99954 134 aa8.56□□□□□ -1.04
NPLOC4-212ENST00000573328 CCDC106Q9BWC9 280 aa8.56□□□□□ -1.04
NPLOC4-212ENST00000573328 POTEKPQ9BYX7 375 aa8.56□□□□□ -1.04
NPLOC4-212ENST00000573328 OR11A1Q9GZK7 315 aa8.56□□□□□ -1.04
NPLOC4-212ENST00000573328 SLC38A1Q9H2H9 487 aa8.56□□□□□ -1.04
NPLOC4-212ENST00000573328 RMND5AQ9H871 391 aa8.56□□□□□ -1.04
NPLOC4-212ENST00000573328 TMBIM4Q9HC24 238 aa8.56□□□□□ -1.04
NPLOC4-212ENST00000573328 LAMP3Q9UQV4 416 aa8.56□□□□□ -1.04
NPLOC4-212ENST00000573328 NOSIPQ9Y314 301 aaKnown RBP8.56□□□□□ -1.04
NPLOC4-212ENST00000573328 HDGFL3Q9Y3E1 203 aa8.56□□□□□ -1.04
NPLOC4-212ENST00000573328 USF3Q68DE3 2245 aa8.56□□□□□ -1.04
NPLOC4-212ENST00000573328 TMED7-TICAM2A0A0A6YYA0 188 aa8.55□□□□□ -1.04
NPLOC4-212ENST00000573328 CIB4A0PJX0 185 aa8.55□□□□□ -1.04
NPLOC4-212ENST00000573328 AGAP5A6NIR3 686 aa8.55□□□□□ -1.04
NPLOC4-212ENST00000573328 ZNF724A8MTY0 619 aa8.55□□□□□ -1.04
NPLOC4-212ENST00000573328 ZNF814B7Z6K7 855 aa8.55□□□□□ -1.04
NPLOC4-212ENST00000573328 H7C1Q1 480 aa8.55□□□□□ -1.04
NPLOC4-212ENST00000573328 UBDO15205 165 aa8.55□□□□□ -1.04
NPLOC4-212ENST00000573328 PMS2P2O95744 297 aa8.55□□□□□ -1.04
NPLOC4-212ENST00000573328 IGHV3-9P01782 118 aa8.55□□□□□ -1.04
NPLOC4-212ENST00000573328 DBIP07108 87 aaKnown RBP8.55□□□□□ -1.04
NPLOC4-212ENST00000573328 ETFAP13804 333 aa8.55□□□□□ -1.04
NPLOC4-212ENST00000573328 FKBP2P26885 142 aaKnown RBP8.55□□□□□ -1.04
NPLOC4-212ENST00000573328 MAGEA8P43361 318 aa8.55□□□□□ -1.04
NPLOC4-212ENST00000573328 POLR2HP52434 150 aaKnown RBP8.55□□□□□ -1.04
NPLOC4-212ENST00000573328 CRISP3P54108 245 aa8.55□□□□□ -1.04
NPLOC4-212ENST00000573328 SLC18A1P54219 525 aa8.55□□□□□ -1.04
NPLOC4-212ENST00000573328 DSTNP60981 165 aa8.55□□□□□ -1.04
NPLOC4-212ENST00000573328 STX1BP61266 288 aa8.55□□□□□ -1.04
NPLOC4-212ENST00000573328 PPA1Q15181 289 aa8.55□□□□□ -1.04
NPLOC4-212ENST00000573328 LIN52Q52LA3 116 aa8.55□□□□□ -1.04
NPLOC4-212ENST00000573328 CASP12Q6UXS9 341 aa8.55□□□□□ -1.04
NPLOC4-212ENST00000573328 MTDHQ86UE4 582 aaKnown RBP8.55□□□□□ -1.04
NPLOC4-212ENST00000573328 MIER2Q8N344 545 aa8.55□□□□□ -1.04
NPLOC4-212ENST00000573328 ZNF611Q8N823 705 aa8.55□□□□□ -1.04
NPLOC4-212ENST00000573328 OR9I1Q8NGQ6 314 aa8.55□□□□□ -1.04
NPLOC4-212ENST00000573328 FBXW5Q969U6 566 aa8.55□□□□□ -1.04
NPLOC4-212ENST00000573328 APH1AQ96BI3 265 aa8.55□□□□□ -1.04
NPLOC4-212ENST00000573328 TLCD1Q96CP7 247 aa8.55□□□□□ -1.04
NPLOC4-212ENST00000573328 MUCL1Q96DR8 90 aa8.55□□□□□ -1.04
NPLOC4-212ENST00000573328 ITCHQ96J02 903 aa8.55□□□□□ -1.04
NPLOC4-212ENST00000573328 ARL5BQ96KC2 179 aa8.55□□□□□ -1.04
NPLOC4-212ENST00000573328 BDH2Q9BUT1 245 aa8.55□□□□□ -1.04
NPLOC4-212ENST00000573328 MTHFD2LQ9H903 347 aaPredicted RBP8.55□□□□□ -1.04
NPLOC4-212ENST00000573328 CALML5Q9NZT1 146 aa8.55□□□□□ -1.04
NPLOC4-212ENST00000573328 ZIM2Q9NZV7 527 aa8.55□□□□□ -1.04
NPLOC4-212ENST00000573328 ING1Q9UK53 422 aaPredicted RBP8.55□□□□□ -1.04
NPLOC4-212ENST00000573328 TMED7Q9Y3B3 224 aa8.55□□□□□ -1.04
NPLOC4-212ENST00000573328 CADP27708 2225 aa8.55□□□□□ -1.04
NPLOC4-212ENST00000573328 NAV3Q8IVL0 2385 aa8.54□□□□□ -1.04
NPLOC4-212ENST00000573328 A0A1W2PP18 115 aa8.54□□□□□ -1.04
NPLOC4-212ENST00000573328 TMEM72A0PK05 275 aa8.54□□□□□ -1.04
NPLOC4-212ENST00000573328 CFAP73A6NFT4 308 aa8.54□□□□□ -1.04
NPLOC4-212ENST00000573328 CCT8L1PA6NM43 557 aa8.54□□□□□ -1.04
NPLOC4-212ENST00000573328 FAM171A2A8MVW0 826 aa8.54□□□□□ -1.04
NPLOC4-212ENST00000573328 GPR171O14626 319 aa8.54□□□□□ -1.04
NPLOC4-212ENST00000573328 POLR3GO15318 223 aaPredicted RBP8.54□□□□□ -1.04
NPLOC4-212ENST00000573328 DNPH1O43598 174 aa8.54□□□□□ -1.04
NPLOC4-212ENST00000573328 ADAM11O75078 769 aa8.54□□□□□ -1.04
NPLOC4-212ENST00000573328 MRPL33O75394 65 aaKnown RBP8.54□□□□□ -1.04
NPLOC4-212ENST00000573328 RAD51DO75771 328 aa8.54□□□□□ -1.04
NPLOC4-212ENST00000573328 GKN3PP0CG01 181 aa8.54□□□□□ -1.04
NPLOC4-212ENST00000573328 GGT1P19440 569 aa8.54□□□□□ -1.04
NPLOC4-212ENST00000573328 NCF2P19878 526 aaPredicted RBP8.54□□□□□ -1.04
NPLOC4-212ENST00000573328 RPS4Y1P22090 263 aaKnown RBP8.54□□□□□ -1.04
NPLOC4-212ENST00000573328 CXCR1P25024 350 aa8.54□□□□□ -1.04
NPLOC4-212ENST00000573328 EDNRAP25101 427 aa8.54□□□□□ -1.04
NPLOC4-212ENST00000573328 TACR3P29371 465 aa8.54□□□□□ -1.04
NPLOC4-212ENST00000573328 SLC1A3P43003 542 aa8.54□□□□□ -1.04
NPLOC4-212ENST00000573328 CLK1P49759 484 aaKnown RBP8.54□□□□□ -1.04
NPLOC4-212ENST00000573328 POLR2JP52435 117 aaKnown RBP8.54□□□□□ -1.04
NPLOC4-212ENST00000573328 ATP5J2P56134 94 aa8.54□□□□□ -1.04
NPLOC4-212ENST00000573328 COPZ1P61923 177 aa8.54□□□□□ -1.04
NPLOC4-212ENST00000573328 RPS4XP62701 263 aaKnown RBP8.54□□□□□ -1.04
NPLOC4-212ENST00000573328 SLC35A1P78382 337 aa8.54□□□□□ -1.04
NPLOC4-212ENST00000573328 PLAURQ03405 335 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms