RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 RINLQ6ZS11 566 aa6.25□□□□□ -1.41
SMG6-209ENST00000571442 ESPNLQ6ZVH7 1005 aa6.25□□□□□ -1.41
SMG6-209ENST00000571442 ATG4DQ86TL0 474 aaPredicted RBP6.25□□□□□ -1.41
SMG6-209ENST00000571442 ARMC8Q8IUR7 673 aa6.25□□□□□ -1.41
SMG6-209ENST00000571442 P3H2Q8IVL5 708 aa6.25□□□□□ -1.41
SMG6-209ENST00000571442 MICU2Q8IYU8 434 aa6.25□□□□□ -1.41
SMG6-209ENST00000571442 CADM2Q8N3J6 435 aa6.25□□□□□ -1.41
SMG6-209ENST00000571442 RNF148Q8N7C7 305 aa6.25□□□□□ -1.41
SMG6-209ENST00000571442 CCDC197Q8NCU1 140 aa6.25□□□□□ -1.41
SMG6-209ENST00000571442 RBM15BQ8NDT2 890 aaKnown RBP6.25□□□□□ -1.41
SMG6-209ENST00000571442 OR2T12Q8NG77 320 aa6.25□□□□□ -1.41
SMG6-209ENST00000571442 OR6T1Q8NGN1 323 aa6.25□□□□□ -1.41
SMG6-209ENST00000571442 LILRB4Q8NHJ6 448 aa6.25□□□□□ -1.41
SMG6-209ENST00000571442 VANGL1Q8TAA9 524 aaPredicted RBP6.25□□□□□ -1.41
SMG6-209ENST00000571442 ABHD3Q8WU67 409 aa6.25□□□□□ -1.41
SMG6-209ENST00000571442 OSTF1Q92882 214 aa6.25□□□□□ -1.41
SMG6-209ENST00000571442 WNT2BQ93097 391 aa6.25□□□□□ -1.41
SMG6-209ENST00000571442 INTS12Q96CB8 462 aaKnown RBP6.25□□□□□ -1.41
SMG6-209ENST00000571442 CMTM5Q96DZ9 223 aa6.25□□□□□ -1.41
SMG6-209ENST00000571442 LRRC37BQ96QE4 947 aa6.25□□□□□ -1.41
SMG6-209ENST00000571442 OR5B2Q96R09 309 aa6.25□□□□□ -1.41
SMG6-209ENST00000571442 RNF122Q9H9V4 155 aa6.25□□□□□ -1.41
SMG6-209ENST00000571442 EFCAB1Q9HAE3 211 aa6.25□□□□□ -1.41
SMG6-209ENST00000571442 MRGBPQ9NV56 204 aa6.25□□□□□ -1.41
SMG6-209ENST00000571442 TMEM181Q9P2C4 612 aa6.25□□□□□ -1.41
SMG6-209ENST00000571442 CHRNA9Q9UGM1 479 aa6.25□□□□□ -1.41
SMG6-209ENST00000571442 TAGLN3Q9UI15 199 aa6.25□□□□□ -1.41
SMG6-209ENST00000571442 IFT52Q9Y366 437 aa6.25□□□□□ -1.41
SMG6-209ENST00000571442 TMED7Q9Y3B3 224 aa6.25□□□□□ -1.41
SMG6-209ENST00000571442 LRBAP50851 2863 aa6.25□□□□□ -1.41
SMG6-209ENST00000571442 CELSR2Q9HCU4 2923 aa6.25□□□□□ -1.41
SMG6-209ENST00000571442 TEP1Q99973 2627 aaKnown RBP6.25□□□□□ -1.41
SMG6-209ENST00000571442 PRR14LQ5THK1 2151 aa6.24□□□□□ -1.41
SMG6-209ENST00000571442 A0A1W2PNV4 684 aa6.24□□□□□ -1.41
SMG6-209ENST00000571442 ELOVL7A1L3X0 281 aa6.24□□□□□ -1.41
SMG6-209ENST00000571442 PRSS44E7EML9 344 aa6.24□□□□□ -1.41
SMG6-209ENST00000571442 SMAD9O15198 467 aaKnown RBP6.24□□□□□ -1.41
SMG6-209ENST00000571442 DCTN3O75935 186 aa6.24□□□□□ -1.41
SMG6-209ENST00000571442 CGAP01215 116 aa6.24□□□□□ -1.41
SMG6-209ENST00000571442 FESP07332 822 aa6.24□□□□□ -1.41
SMG6-209ENST00000571442 TMIGD3P0DMS9 266 aaPredicted RBP6.24□□□□□ -1.41
SMG6-209ENST00000571442 AGAP20933 346 aa6.24□□□□□ -1.41
SMG6-209ENST00000571442 BMP5P22003 454 aa6.24□□□□□ -1.41
SMG6-209ENST00000571442 HTR1EP28566 365 aa6.24□□□□□ -1.41
SMG6-209ENST00000571442 CHRNB4P30926 498 aa6.24□□□□□ -1.41
SMG6-209ENST00000571442 KDELR2P33947 212 aa6.24□□□□□ -1.41
SMG6-209ENST00000571442 NTF4P34130 210 aa6.24□□□□□ -1.41
SMG6-209ENST00000571442 APOBEC1P41238 236 aaKnown RBP6.24□□□□□ -1.41
SMG6-209ENST00000571442 SLC1A3P43003 542 aa6.24□□□□□ -1.41
SMG6-209ENST00000571442 OR1E2P47887 323 aa6.24□□□□□ -1.41
SMG6-209ENST00000571442 DIO1P49895 249 aa6.24□□□□□ -1.41
SMG6-209ENST00000571442 POLR2HP52434 150 aaKnown RBP6.24□□□□□ -1.41
SMG6-209ENST00000571442 SMSP52788 366 aa6.24□□□□□ -1.41
SMG6-209ENST00000571442 EEFSECP57772 596 aaKnown RBP6.24□□□□□ -1.41
SMG6-209ENST00000571442 SIRPAP78324 504 aa6.24□□□□□ -1.41
SMG6-209ENST00000571442 MYBPHQ13203 477 aa6.24□□□□□ -1.41
SMG6-209ENST00000571442 VEZF1Q14119 521 aa6.24□□□□□ -1.41
SMG6-209ENST00000571442 KRT72Q14CN4 511 aa6.24□□□□□ -1.41
SMG6-209ENST00000571442 OR1Q1Q15612 314 aa6.24□□□□□ -1.41
SMG6-209ENST00000571442 SGCBQ16585 318 aa6.24□□□□□ -1.41
SMG6-209ENST00000571442 LRRC23Q53EV4 343 aaPredicted RBP6.24□□□□□ -1.41
SMG6-209ENST00000571442 GKAP1Q5VSY0 366 aaPredicted RBP6.24□□□□□ -1.41
SMG6-209ENST00000571442 WBP2NLQ6ICG8 309 aa6.24□□□□□ -1.41
SMG6-209ENST00000571442 PPP4R4Q6NUP7 873 aa6.24□□□□□ -1.41
SMG6-209ENST00000571442 C3orf33Q6P1S2 294 aa6.24□□□□□ -1.41
SMG6-209ENST00000571442 MTFR2Q6P444 385 aa6.24□□□□□ -1.41
SMG6-209ENST00000571442 TMPPEQ6ZT21 453 aa6.24□□□□□ -1.41
SMG6-209ENST00000571442 ZNF550Q7Z398 422 aa6.24□□□□□ -1.41
SMG6-209ENST00000571442 P4HA3Q7Z4N8 544 aa6.24□□□□□ -1.41
SMG6-209ENST00000571442 BTLAQ7Z6A9 289 aa6.24□□□□□ -1.41
SMG6-209ENST00000571442 TSEN54Q7Z6J9 526 aaKnown RBP6.24□□□□□ -1.41
SMG6-209ENST00000571442 VTCN1Q7Z7D3 282 aa6.24□□□□□ -1.41
SMG6-209ENST00000571442 ZNF440Q8IYI8 595 aa6.24□□□□□ -1.41
SMG6-209ENST00000571442 FAM86B1Q8N7N1 296 aa6.24□□□□□ -1.41
SMG6-209ENST00000571442 ACBD4Q8NC06 268 aa6.24□□□□□ -1.41
SMG6-209ENST00000571442 BCAS4Q8TDM0 211 aa6.24□□□□□ -1.41
SMG6-209ENST00000571442 TMEM234Q8WY98 164 aa6.24□□□□□ -1.41
SMG6-209ENST00000571442 STARD4Q96DR4 205 aa6.24□□□□□ -1.41
SMG6-209ENST00000571442 DTNBP1Q96EV8 351 aa6.24□□□□□ -1.41
SMG6-209ENST00000571442 ZNF300Q96RE9 604 aaPredicted RBP6.24□□□□□ -1.41
SMG6-209ENST00000571442 ZNF607Q96SK3 696 aa6.24□□□□□ -1.41
SMG6-209ENST00000571442 SH3GL1Q99961 368 aa6.24□□□□□ -1.41
SMG6-209ENST00000571442 HOPXQ9BPY8 73 aaPredicted RBP6.24□□□□□ -1.41
SMG6-209ENST00000571442 PTDSS2Q9BVG9 487 aa6.24□□□□□ -1.41
SMG6-209ENST00000571442 ALG2Q9H553 416 aa6.24□□□□□ -1.41
SMG6-209ENST00000571442 JKAMPQ9P055 326 aa6.24□□□□□ -1.41
SMG6-209ENST00000571442 SEC14L4Q9UDX3 406 aa6.24□□□□□ -1.41
SMG6-209ENST00000571442 CD300AQ9UGN4 299 aa6.24□□□□□ -1.41
SMG6-209ENST00000571442 EGFL7Q9UHF1 273 aa6.24□□□□□ -1.41
SMG6-209ENST00000571442 ZNF232Q9UNY5 417 aa6.24□□□□□ -1.41
SMG6-209ENST00000571442 ZNF175Q9Y473 711 aa6.24□□□□□ -1.41
SMG6-209ENST00000571442 PKDREJQ9NTG1 2253 aa6.23□□□□□ -1.41
SMG6-209ENST00000571442 A0A0B4J2E0 115 aa6.23□□□□□ -1.41
SMG6-209ENST00000571442 A0A1B0GX12 115 aa6.23□□□□□ -1.41
SMG6-209ENST00000571442 CPSF4LA6NMK7 179 aaKnown RBP6.23□□□□□ -1.41
SMG6-209ENST00000571442 ENO4A6NNW6 628 aa6.23□□□□□ -1.41
SMG6-209ENST00000571442 HSPB2A8KAH6 182 aa6.23□□□□□ -1.41
SMG6-209ENST00000571442 FTCDNL1E5RQL4 147 aa6.23□□□□□ -1.41
SMG6-209ENST00000571442 LRRN3E7EW58 273 aa6.23□□□□□ -1.41
SMG6-209ENST00000571442 J3KTA2 159 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms