RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 CELA3BP08861 270 aa5.54□□□□□ -1.52
HERPUD1-217ENST00000569429 GABRB3P28472 473 aa5.54□□□□□ -1.52
HERPUD1-217ENST00000569429 TYK2P29597 1187 aa5.54□□□□□ -1.52
HERPUD1-217ENST00000569429 GLRXP35754 106 aa5.54□□□□□ -1.52
HERPUD1-217ENST00000569429 RPL4P36578 427 aaKnown RBP5.54□□□□□ -1.52
HERPUD1-217ENST00000569429 TGFBR2P37173 567 aa5.54□□□□□ -1.52
HERPUD1-217ENST00000569429 IER3P46695 156 aa5.54□□□□□ -1.52
HERPUD1-217ENST00000569429 SLC6A9P48067 706 aa5.54□□□□□ -1.52
HERPUD1-217ENST00000569429 UBE2NP61088 152 aaKnown RBP5.54□□□□□ -1.52
HERPUD1-217ENST00000569429 DDX39BQ13838 428 aaKnown RBP5.54□□□□□ -1.52
HERPUD1-217ENST00000569429 MAD2L1BPQ15013 274 aaPredicted RBP5.54□□□□□ -1.52
HERPUD1-217ENST00000569429 NSUN5P1Q3KNT7 163 aa5.54□□□□□ -1.52
HERPUD1-217ENST00000569429 PCGF3Q3KNV8 242 aa5.54□□□□□ -1.52
HERPUD1-217ENST00000569429 GRAMD1BQ3KR37 738 aa5.54□□□□□ -1.52
HERPUD1-217ENST00000569429 TSPO2Q5TGU0 170 aa5.54□□□□□ -1.52
HERPUD1-217ENST00000569429 CLEC6AQ6EIG7 209 aa5.54□□□□□ -1.52
HERPUD1-217ENST00000569429 KRT80Q6KB66 452 aa5.54□□□□□ -1.52
HERPUD1-217ENST00000569429 LRRN1Q6UXK5 716 aa5.54□□□□□ -1.52
HERPUD1-217ENST00000569429 MTDHQ86UE4 582 aaKnown RBP5.54□□□□□ -1.52
HERPUD1-217ENST00000569429 MYPOPQ86VE0 399 aaPredicted RBP5.54□□□□□ -1.52
HERPUD1-217ENST00000569429 GAS2L3Q86XJ1 694 aa5.54□□□□□ -1.52
HERPUD1-217ENST00000569429 MISPQ8IVT2 679 aa5.54□□□□□ -1.52
HERPUD1-217ENST00000569429 POU5F2Q8N7G0 328 aa5.54□□□□□ -1.52
HERPUD1-217ENST00000569429 C2CD4AQ8NCU7 369 aaPredicted RBP5.54□□□□□ -1.52
HERPUD1-217ENST00000569429 OR7G2Q8NG99 324 aa5.54□□□□□ -1.52
HERPUD1-217ENST00000569429 MAGEE2Q8TD90 523 aaPredicted RBP5.54□□□□□ -1.52
HERPUD1-217ENST00000569429 LRTOMTQ8WZ04 291 aa5.54□□□□□ -1.52
HERPUD1-217ENST00000569429 ALG3Q92685 438 aa5.54□□□□□ -1.52
HERPUD1-217ENST00000569429 CNRIP1Q96F85 164 aaPredicted RBP5.54□□□□□ -1.52
HERPUD1-217ENST00000569429 DIRC2Q96SL1 478 aa5.54□□□□□ -1.52
HERPUD1-217ENST00000569429 NOX3Q9HBY0 568 aa5.54□□□□□ -1.52
HERPUD1-217ENST00000569429 TMEM45AQ9NWC5 275 aa5.54□□□□□ -1.52
HERPUD1-217ENST00000569429 PARPBPQ9NWS1 579 aa5.54□□□□□ -1.52
HERPUD1-217ENST00000569429 UBAP1Q9NZ09 502 aa5.54□□□□□ -1.52
HERPUD1-217ENST00000569429 PAK5Q9P286 719 aa5.54□□□□□ -1.52
HERPUD1-217ENST00000569429 PSME2Q9UL46 239 aa5.54□□□□□ -1.52
HERPUD1-217ENST00000569429 GPC6Q9Y625 555 aaPredicted RBP5.54□□□□□ -1.52
HERPUD1-217ENST00000569429 DSPPQ9NZW4 1301 aa5.53□□□□□ -1.52
HERPUD1-217ENST00000569429 MAGEB16A2A368 324 aa5.53□□□□□ -1.52
HERPUD1-217ENST00000569429 NPEPPSL1A6NEC2 478 aa5.53□□□□□ -1.52
HERPUD1-217ENST00000569429 C17orf100A8MU93 164 aa5.53□□□□□ -1.52
HERPUD1-217ENST00000569429 RNASEK-C17orf49H0YIS7 233 aa5.53□□□□□ -1.52
HERPUD1-217ENST00000569429 LHBP01229 141 aa5.53□□□□□ -1.52
HERPUD1-217ENST00000569429 LTA4HP09960 611 aaKnown RBP5.53□□□□□ -1.52
HERPUD1-217ENST00000569429 CCDC175P0C221 793 aa5.53□□□□□ -1.52
HERPUD1-217ENST00000569429 ETS1P14921 441 aa5.53□□□□□ -1.52
HERPUD1-217ENST00000569429 CBR1P16152 277 aa5.53□□□□□ -1.52
HERPUD1-217ENST00000569429 HSPA7P48741 367 aa5.53□□□□□ -1.52
HERPUD1-217ENST00000569429 DIO1P49895 249 aa5.53□□□□□ -1.52
HERPUD1-217ENST00000569429 EFNB2P52799 333 aa5.53□□□□□ -1.52
HERPUD1-217ENST00000569429 PGGT1BP53609 377 aa5.53□□□□□ -1.52
HERPUD1-217ENST00000569429 RWDD2BP57060 319 aa5.53□□□□□ -1.52
HERPUD1-217ENST00000569429 CCL8P80075 99 aa5.53□□□□□ -1.52
HERPUD1-217ENST00000569429 CDK16Q00536 496 aa5.53□□□□□ -1.52
HERPUD1-217ENST00000569429 PAX2Q02962 417 aa5.53□□□□□ -1.52
HERPUD1-217ENST00000569429 TGFBIQ15582 683 aa5.53□□□□□ -1.52
HERPUD1-217ENST00000569429 TRADDQ15628 312 aa5.53□□□□□ -1.52
HERPUD1-217ENST00000569429 OASLQ15646 514 aaKnown RBP5.53□□□□□ -1.52
HERPUD1-217ENST00000569429 CCNG2Q16589 344 aa5.53□□□□□ -1.52
HERPUD1-217ENST00000569429 HFEQ30201 348 aa5.53□□□□□ -1.52
HERPUD1-217ENST00000569429 TCTEX1D4Q5JR98 221 aa5.53□□□□□ -1.52
HERPUD1-217ENST00000569429 GPR157Q5UAW9 335 aa5.53□□□□□ -1.52
HERPUD1-217ENST00000569429 GRHL2Q6ISB3 625 aa5.53□□□□□ -1.52
HERPUD1-217ENST00000569429 C11orf63Q6NUN7 778 aa5.53□□□□□ -1.52
HERPUD1-217ENST00000569429 CASP12Q6UXS9 341 aa5.53□□□□□ -1.52
HERPUD1-217ENST00000569429 TMPPEQ6ZT21 453 aa5.53□□□□□ -1.52
HERPUD1-217ENST00000569429 FRA10AC1Q70Z53 315 aa5.53□□□□□ -1.52
HERPUD1-217ENST00000569429 ADAMTSL2Q86TH1 951 aa5.53□□□□□ -1.52
HERPUD1-217ENST00000569429 PRUNE1Q86TP1 453 aa5.53□□□□□ -1.52
HERPUD1-217ENST00000569429 NDUFA11Q86Y39 141 aa5.53□□□□□ -1.52
HERPUD1-217ENST00000569429 LDLRAD3Q86YD5 345 aa5.53□□□□□ -1.52
HERPUD1-217ENST00000569429 LYG1Q8N1E2 194 aa5.53□□□□□ -1.52
HERPUD1-217ENST00000569429 SDR9C7Q8NEX9 313 aa5.53□□□□□ -1.52
HERPUD1-217ENST00000569429 ATP6V1C2Q8NEY4 427 aa5.53□□□□□ -1.52
HERPUD1-217ENST00000569429 OR1K1Q8NGR3 316 aa5.53□□□□□ -1.52
HERPUD1-217ENST00000569429 B4GALNT2Q8NHY0 566 aa5.53□□□□□ -1.52
HERPUD1-217ENST00000569429 BCL2L2Q92843 193 aaPredicted RBP5.53□□□□□ -1.52
HERPUD1-217ENST00000569429 ESAMQ96AP7 390 aa5.53□□□□□ -1.52
HERPUD1-217ENST00000569429 KLHL29Q96CT2 875 aa5.53□□□□□ -1.52
HERPUD1-217ENST00000569429 RCC1LQ96I51 464 aaKnown RBP5.53□□□□□ -1.52
HERPUD1-217ENST00000569429 RCHY1Q96PM5 261 aa5.53□□□□□ -1.52
HERPUD1-217ENST00000569429 MTERF1Q99551 399 aaKnown RBP5.53□□□□□ -1.52
HERPUD1-217ENST00000569429 FRMD8P1Q9BZ68 369 aaPredicted RBP5.53□□□□□ -1.52
HERPUD1-217ENST00000569429 LAT2Q9GZY6 243 aa5.53□□□□□ -1.52
HERPUD1-217ENST00000569429 VPS11Q9H270 941 aa5.53□□□□□ -1.52
HERPUD1-217ENST00000569429 PATZ1Q9HBE1 687 aaKnown RBP5.53□□□□□ -1.52
HERPUD1-217ENST00000569429 C20orf96Q9NUD7 363 aaPredicted RBP5.53□□□□□ -1.52
HERPUD1-217ENST00000569429 MYEF2Q9P2K5 600 aaKnown RBP5.53□□□□□ -1.52
HERPUD1-217ENST00000569429 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.53□□□□□ -1.52
HERPUD1-217ENST00000569429 FOXJ3Q9UPW0 622 aa5.53□□□□□ -1.52
HERPUD1-217ENST00000569429 USH1CQ9Y6N9 552 aa5.53□□□□□ -1.52
HERPUD1-217ENST00000569429 ZNF780BQ9Y6R6 833 aa5.53□□□□□ -1.52
HERPUD1-217ENST00000569429 ISPDA4D126 451 aa5.52□□□□□ -1.53
HERPUD1-217ENST00000569429 FAM187AA6NFU0 413 aa5.52□□□□□ -1.53
HERPUD1-217ENST00000569429 ADARB2-AS1A8MUL3 147 aa5.52□□□□□ -1.53
HERPUD1-217ENST00000569429 AKR1B10O60218 316 aa5.52□□□□□ -1.53
HERPUD1-217ENST00000569429 GUCY1B2O75343 617 aa5.52□□□□□ -1.53
HERPUD1-217ENST00000569429 SEMA3DO95025 777 aa5.52□□□□□ -1.53
HERPUD1-217ENST00000569429 OXSR1O95747 527 aaPredicted RBP5.52□□□□□ -1.53
HERPUD1-217ENST00000569429 IGHV4-59P01825 116 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms