RNA–Protein interactions for RNA: ENST00000567943.1

FANCA-228, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-228ENST00000567943 PRRC2AP48634 2157 aaKnown RBP22.44■■□□□ 1.18
FANCA-228ENST00000567943 EPS8Q12929 822 aa22.44■■□□□ 1.18
FANCA-228ENST00000567943 SYT14P1Q58G82 188 aa22.44■■□□□ 1.18
FANCA-228ENST00000567943 RUNDC3AQ59EK9 446 aa22.44■■□□□ 1.18
FANCA-228ENST00000567943 RNF220Q5VTB9 566 aa22.44■■□□□ 1.18
FANCA-228ENST00000567943 GTF2IRD2BQ6EKJ0 949 aa22.44■■□□□ 1.18
FANCA-228ENST00000567943 GTF2IRD2Q86UP8 949 aa22.44■■□□□ 1.18
FANCA-228ENST00000567943 ZNF440Q8IYI8 595 aa22.44■■□□□ 1.18
FANCA-228ENST00000567943 CLIP4Q8N3C7 705 aa22.44■■□□□ 1.18
FANCA-228ENST00000567943 OR6K3Q8NGY3 331 aa22.44■■□□□ 1.18
FANCA-228ENST00000567943 RNF128Q8TEB7 428 aa22.44■■□□□ 1.18
FANCA-228ENST00000567943 ABHD3Q8WU67 409 aa22.44■■□□□ 1.18
FANCA-228ENST00000567943 SLC25A43Q8WUT9 341 aaPredicted RBP22.44■■□□□ 1.18
FANCA-228ENST00000567943 GLRX2Q9NS18 164 aa22.44■■□□□ 1.18
FANCA-228ENST00000567943 ELOVL5Q9NYP7 299 aa22.44■■□□□ 1.18
FANCA-228ENST00000567943 CHRNA9Q9UGM1 479 aa22.44■■□□□ 1.18
FANCA-228ENST00000567943 ST6GALNAC2Q9UJ37 374 aa22.44■■□□□ 1.18
FANCA-228ENST00000567943 IFT52Q9Y366 437 aa22.44■■□□□ 1.18
FANCA-228ENST00000567943 SPIN1Q9Y657 262 aaPredicted RBP22.44■■□□□ 1.18
FANCA-228ENST00000567943 TFPIP10646 304 aa22.43■■□□□ 1.18
FANCA-228ENST00000567943 POU2F1P14859 743 aa22.43■■□□□ 1.18
FANCA-228ENST00000567943 UQCRBP14927 111 aa22.43■■□□□ 1.18
FANCA-228ENST00000567943 GPX2P18283 190 aa22.43■■□□□ 1.18
FANCA-228ENST00000567943 CCNA2P20248 432 aa22.43■■□□□ 1.18
FANCA-228ENST00000567943 RAC3P60763 192 aa22.43■■□□□ 1.18
FANCA-228ENST00000567943 CDK6Q00534 326 aa22.43■■□□□ 1.18
FANCA-228ENST00000567943 NFYCQ13952 458 aa22.43■■□□□ 1.18
FANCA-228ENST00000567943 ZNF311Q5JNZ3 666 aa22.43■■□□□ 1.18
FANCA-228ENST00000567943 SPNS3Q6ZMD2 512 aa22.43■■□□□ 1.18
FANCA-228ENST00000567943 FCRLAQ7L513 359 aa22.43■■□□□ 1.18
FANCA-228ENST00000567943 ADGRG3Q86Y34 549 aa22.43■■□□□ 1.18
FANCA-228ENST00000567943 SPATA9Q9BWV2 254 aa22.43■■□□□ 1.18
FANCA-228ENST00000567943 PLEKHF2Q9H8W4 249 aa22.43■■□□□ 1.18
FANCA-228ENST00000567943 KLHL28Q9NXS3 571 aa22.43■■□□□ 1.18
FANCA-228ENST00000567943 IGHV3-15A0A0B4J1V0 119 aa22.42■■□□□ 1.18
FANCA-228ENST00000567943 FAAHO00519 579 aa22.42■■□□□ 1.18
FANCA-228ENST00000567943 KLK2P20151 261 aa22.42■■□□□ 1.18
FANCA-228ENST00000567943 ENPP1P22413 925 aa22.42■■□□□ 1.18
FANCA-228ENST00000567943 AGTR1P30556 359 aa22.42■■□□□ 1.18
FANCA-228ENST00000567943 HTR3AP46098 478 aa22.42■■□□□ 1.18
FANCA-228ENST00000567943 POU4F3Q15319 338 aa22.42■■□□□ 1.18
FANCA-228ENST00000567943 ZSWIM7Q19AV6 140 aa22.42■■□□□ 1.18
FANCA-228ENST00000567943 ANKRD27Q96NW4 1050 aa22.42■■□□□ 1.18
FANCA-228ENST00000567943 CGREF1Q99674 301 aa22.42■■□□□ 1.18
FANCA-228ENST00000567943 SLC39A3Q9BRY0 314 aa22.42■■□□□ 1.18
FANCA-228ENST00000567943 ARMC7Q9H6L4 198 aa22.42■■□□□ 1.18
FANCA-228ENST00000567943 SAR1AQ9NR31 198 aa22.42■■□□□ 1.18
FANCA-228ENST00000567943 KLHL14Q9P2G3 628 aa22.42■■□□□ 1.18
FANCA-228ENST00000567943 NDRG3Q9UGV2 375 aa22.42■■□□□ 1.18
FANCA-228ENST00000567943 ING1Q9UK53 422 aaPredicted RBP22.42■■□□□ 1.18
FANCA-228ENST00000567943 CHST2Q9Y4C5 530 aa22.42■■□□□ 1.18
FANCA-228ENST00000567943 ETS2P15036 469 aa22.41■■□□□ 1.18
FANCA-228ENST00000567943 TACR3P29371 465 aa22.41■■□□□ 1.18
FANCA-228ENST00000567943 ACAA2P42765 397 aaKnown RBP22.41■■□□□ 1.18
FANCA-228ENST00000567943 SLC1A3P43003 542 aa22.41■■□□□ 1.18
FANCA-228ENST00000567943 POLR2HP52434 150 aaKnown RBP22.41■■□□□ 1.18
FANCA-228ENST00000567943 MTPNP58546 118 aa22.41■■□□□ 1.18
FANCA-228ENST00000567943 RNPS1Q15287 305 aaKnown RBP22.41■■□□□ 1.18
FANCA-228ENST00000567943 EXOC3L2Q2M3D2 409 aa22.41■■□□□ 1.18
FANCA-228ENST00000567943 REEP3Q6NUK4 255 aa22.41■■□□□ 1.18
FANCA-228ENST00000567943 TMPPEQ6ZT21 453 aa22.41■■□□□ 1.18
FANCA-228ENST00000567943 ZNF550Q7Z398 422 aa22.41■■□□□ 1.18
FANCA-228ENST00000567943 DNAJA3Q96EY1 480 aa22.41■■□□□ 1.18
FANCA-228ENST00000567943 ZNF317Q96PQ6 595 aaPredicted RBP22.41■■□□□ 1.18
FANCA-228ENST00000567943 OR11A1Q9GZK7 315 aa22.41■■□□□ 1.18
FANCA-228ENST00000567943 TMEM38AQ9H6F2 299 aa22.41■■□□□ 1.18
FANCA-228ENST00000567943 CCM2LQ9NUG4 571 aaPredicted RBP22.41■■□□□ 1.18
FANCA-228ENST00000567943 MRGBPQ9NV56 204 aa22.41■■□□□ 1.18
FANCA-228ENST00000567943 OSGIN1Q9UJX0 560 aa22.41■■□□□ 1.18
FANCA-228ENST00000567943 TMED7-TICAM2A0A0A6YYA0 188 aa22.4■■□□□ 1.18
FANCA-228ENST00000567943 DEFB108AA8MXU0 73 aa22.4■■□□□ 1.18
FANCA-228ENST00000567943 C16orf97H3BN30 126 aa22.4■■□□□ 1.18
FANCA-228ENST00000567943 SULT2B1O00204 365 aa22.4■■□□□ 1.18
FANCA-228ENST00000567943 PRKD3O94806 890 aa22.4■■□□□ 1.18
FANCA-228ENST00000567943 PRG2P13727 222 aa22.4■■□□□ 1.18
FANCA-228ENST00000567943 KCNJ5P48544 419 aa22.4■■□□□ 1.18
FANCA-228ENST00000567943 DIO1P49895 249 aa22.4■■□□□ 1.18
FANCA-228ENST00000567943 KLF10Q13118 480 aa22.4■■□□□ 1.18
FANCA-228ENST00000567943 SCARB2Q14108 478 aa22.4■■□□□ 1.18
FANCA-228ENST00000567943 SELPLGQ14242 412 aa22.4■■□□□ 1.18
FANCA-228ENST00000567943 NINJ1Q92982 152 aa22.4■■□□□ 1.18
FANCA-228ENST00000567943 C6orf203Q9P0P8 240 aaPredicted RBP22.4■■□□□ 1.18
FANCA-228ENST00000567943 PLEKHA6Q9Y2H5 1048 aa22.4■■□□□ 1.18
FANCA-228ENST00000567943 TMED7Q9Y3B3 224 aa22.4■■□□□ 1.18
FANCA-228ENST00000567943 FBP2O00757 339 aa22.39■■□□□ 1.17
FANCA-228ENST00000567943 SMAD9O15198 467 aaKnown RBP22.39■■□□□ 1.17
FANCA-228ENST00000567943 GOSR1O95249 250 aa22.39■■□□□ 1.17
FANCA-228ENST00000567943 SLC6A2P23975 617 aa22.39■■□□□ 1.17
FANCA-228ENST00000567943 ART1P52961 327 aa22.39■■□□□ 1.17
FANCA-228ENST00000567943 CSNK2A1P68400 391 aaPredicted RBP22.39■■□□□ 1.17
FANCA-228ENST00000567943 CAPRIN1Q14444 709 aaKnown RBP22.39■■□□□ 1.17
FANCA-228ENST00000567943 ADRM1Q16186 407 aa22.39■■□□□ 1.17
FANCA-228ENST00000567943 TMEM201Q5SNT2 666 aa22.39■■□□□ 1.17
FANCA-228ENST00000567943 ANKRD34AQ69YU3 496 aa22.39■■□□□ 1.17
FANCA-228ENST00000567943 STAC2Q6ZMT1 411 aa22.39■■□□□ 1.17
FANCA-228ENST00000567943 NUFIP2Q7Z417 695 aaKnown RBP22.39■■□□□ 1.17
FANCA-228ENST00000567943 SERPINA11Q86U17 422 aa22.39■■□□□ 1.17
FANCA-228ENST00000567943 TUSC5Q8IXB3 177 aa22.39■■□□□ 1.17
FANCA-228ENST00000567943 SLC43A2Q8N370 569 aa22.39■■□□□ 1.17
FANCA-228ENST00000567943 CADM2Q8N3J6 435 aa22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms