RNA–Protein interactions for RNA: ENST00000567698.1

SHCBP1-206, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 2

Gene SHCBP1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-206ENST00000567698 KIF25Q9UIL4 384 aa3.14□□□□□ -1.91
SHCBP1-206ENST00000567698 NDC80O14777 642 aa3.13□□□□□ -1.91
SHCBP1-206ENST00000567698 CXCL13O43927 109 aa3.13□□□□□ -1.91
SHCBP1-206ENST00000567698 NPIPB7O75200 414 aa3.13□□□□□ -1.91
SHCBP1-206ENST00000567698 ATP6V1C1P21283 382 aa3.13□□□□□ -1.91
SHCBP1-206ENST00000567698 CALB2P22676 271 aa3.13□□□□□ -1.91
SHCBP1-206ENST00000567698 LAP3P28838 519 aa3.13□□□□□ -1.91
SHCBP1-206ENST00000567698 ORC2Q13416 577 aaPredicted RBP3.13□□□□□ -1.91
SHCBP1-206ENST00000567698 GRB7Q14451 532 aa3.13□□□□□ -1.91
SHCBP1-206ENST00000567698 ANKDD1AQ495B1 522 aa3.13□□□□□ -1.91
SHCBP1-206ENST00000567698 KRTAP5-4Q6L8H1 288 aa3.13□□□□□ -1.91
SHCBP1-206ENST00000567698 CCDC137Q6PK04 289 aaKnown RBP3.13□□□□□ -1.91
SHCBP1-206ENST00000567698 PRSS41Q7RTY9 318 aa3.13□□□□□ -1.91
SHCBP1-206ENST00000567698 ZNF100Q8IYN0 542 aa3.13□□□□□ -1.91
SHCBP1-206ENST00000567698 C6orf223Q8N319 242 aa3.13□□□□□ -1.91
SHCBP1-206ENST00000567698 NKAPP1Q8N9T2 125 aa3.13□□□□□ -1.91
SHCBP1-206ENST00000567698 SYT14Q8NB59 555 aa3.13□□□□□ -1.91
SHCBP1-206ENST00000567698 NEIL3Q8TAT5 605 aa3.13□□□□□ -1.91
SHCBP1-206ENST00000567698 CTNNBL1Q8WYA6 563 aaPredicted RBP3.13□□□□□ -1.91
SHCBP1-206ENST00000567698 EBF4Q9BQW3 602 aa3.13□□□□□ -1.91
SHCBP1-206ENST00000567698 ERP44Q9BS26 406 aa3.13□□□□□ -1.91
SHCBP1-206ENST00000567698 NXF3Q9H4D5 531 aaKnown RBP3.13□□□□□ -1.91
SHCBP1-206ENST00000567698 SMYD3Q9H7B4 428 aa3.13□□□□□ -1.91
SHCBP1-206ENST00000567698 NUDT15Q9NV35 164 aa3.13□□□□□ -1.91
SHCBP1-206ENST00000567698 PIPOXQ9P0Z9 390 aa3.13□□□□□ -1.91
SHCBP1-206ENST00000567698 PCSK1NQ9UHG2 260 aa3.13□□□□□ -1.91
SHCBP1-206ENST00000567698 PHF11Q9UIL8 331 aa3.13□□□□□ -1.91
SHCBP1-206ENST00000567698 MRPS33Q9Y291 106 aaKnown RBP3.13□□□□□ -1.91
SHCBP1-206ENST00000567698 POLDIP2Q9Y2S7 368 aa3.13□□□□□ -1.91
SHCBP1-206ENST00000567698 PRG3Q9Y2Y8 225 aaPredicted RBP3.13□□□□□ -1.91
SHCBP1-206ENST00000567698 MEMO1Q9Y316 297 aa3.13□□□□□ -1.91
SHCBP1-206ENST00000567698 NEUROG3Q9Y4Z2 214 aa3.13□□□□□ -1.91
SHCBP1-206ENST00000567698 CDH10Q9Y6N8 788 aa3.13□□□□□ -1.91
SHCBP1-206ENST00000567698 CDC42BPBQ9Y5S2 1711 aa3.13□□□□□ -1.91
SHCBP1-206ENST00000567698 NOL3O60936 208 aaKnown RBP3.12□□□□□ -1.91
SHCBP1-206ENST00000567698 RBMY1CP0DJD4 496 aa3.12□□□□□ -1.91
SHCBP1-206ENST00000567698 RPA2P15927 270 aa3.12□□□□□ -1.91
SHCBP1-206ENST00000567698 MGMTP16455 207 aa3.12□□□□□ -1.91
SHCBP1-206ENST00000567698 MDKP21741 143 aaPredicted RBP3.12□□□□□ -1.91
SHCBP1-206ENST00000567698 FGF9P31371 208 aaPredicted RBP3.12□□□□□ -1.91
SHCBP1-206ENST00000567698 CHI3L1P36222 383 aaPredicted RBP3.12□□□□□ -1.91
SHCBP1-206ENST00000567698 DAP3P51398 398 aaKnown RBP3.12□□□□□ -1.91
SHCBP1-206ENST00000567698 ARFIP1P53367 373 aa3.12□□□□□ -1.91
SHCBP1-206ENST00000567698 NUP107P57740 925 aa3.12□□□□□ -1.91
SHCBP1-206ENST00000567698 CBX1P83916 185 aa3.12□□□□□ -1.91
SHCBP1-206ENST00000567698 NSUN5P1Q3KNT7 163 aa3.12□□□□□ -1.91
SHCBP1-206ENST00000567698 C10orf120Q5SQS8 335 aa3.12□□□□□ -1.91
SHCBP1-206ENST00000567698 CASC10Q5T4H9 136 aa3.12□□□□□ -1.91
SHCBP1-206ENST00000567698 OR2G6Q5TZ20 316 aa3.12□□□□□ -1.91
SHCBP1-206ENST00000567698 PPP1R42Q7Z4L9 355 aa3.12□□□□□ -1.91
SHCBP1-206ENST00000567698 VRK2Q86Y07 508 aa3.12□□□□□ -1.91
SHCBP1-206ENST00000567698 NRMQ8IXM6 262 aa3.12□□□□□ -1.91
SHCBP1-206ENST00000567698 CLEC4FQ8N1N0 589 aa3.12□□□□□ -1.91
SHCBP1-206ENST00000567698 LINC01555Q8NAE3 123 aa3.12□□□□□ -1.91
SHCBP1-206ENST00000567698 PIGCQ92535 297 aa3.12□□□□□ -1.91
SHCBP1-206ENST00000567698 DCUN1D4Q92564 292 aa3.12□□□□□ -1.91
SHCBP1-206ENST00000567698 EMG1Q92979 244 aaKnown RBP3.12□□□□□ -1.91
SHCBP1-206ENST00000567698 RPUSD4Q96CM3 377 aaKnown RBP3.12□□□□□ -1.91
SHCBP1-206ENST00000567698 TRIM44Q96DX7 344 aaPredicted RBP3.12□□□□□ -1.91
SHCBP1-206ENST00000567698 TGM7Q96PF1 710 aa3.12□□□□□ -1.91
SHCBP1-206ENST00000567698 GAL3ST1Q99999 423 aa3.12□□□□□ -1.91
SHCBP1-206ENST00000567698 IFT52Q9Y366 437 aa3.12□□□□□ -1.91
SHCBP1-206ENST00000567698 PLEKHG1Q9ULL1 1385 aa3.12□□□□□ -1.91
SHCBP1-206ENST00000567698 A0A1B0GUS0 222 aa3.11□□□□□ -1.91
SHCBP1-206ENST00000567698 PINLYPA6NC86 204 aa3.11□□□□□ -1.91
SHCBP1-206ENST00000567698 TRDCB7Z8K6 153 aa3.11□□□□□ -1.91
SHCBP1-206ENST00000567698 E7ESA3 106 aa3.11□□□□□ -1.91
SHCBP1-206ENST00000567698 GFYI3L273 518 aa3.11□□□□□ -1.91
SHCBP1-206ENST00000567698 K7EQM0 130 aa3.11□□□□□ -1.91
SHCBP1-206ENST00000567698 DCTN6O00399 190 aa3.11□□□□□ -1.91
SHCBP1-206ENST00000567698 MPHOSPH10O00566 681 aaKnown RBP3.11□□□□□ -1.91
SHCBP1-206ENST00000567698 TPM2P07951 284 aa3.11□□□□□ -1.91
SHCBP1-206ENST00000567698 GABRR1P24046 479 aa3.11□□□□□ -1.91
SHCBP1-206ENST00000567698 CD1BP29016 333 aa3.11□□□□□ -1.91
SHCBP1-206ENST00000567698 UGT1A5P35504 534 aa3.11□□□□□ -1.91
SHCBP1-206ENST00000567698 CASP4P49662 377 aa3.11□□□□□ -1.91
SHCBP1-206ENST00000567698 PLK1P53350 603 aa3.11□□□□□ -1.91
SHCBP1-206ENST00000567698 CAPRIN1Q14444 709 aaKnown RBP3.11□□□□□ -1.91
SHCBP1-206ENST00000567698 TRIM16LQ309B1 348 aa3.11□□□□□ -1.91
SHCBP1-206ENST00000567698 TPGS2Q68CL5 300 aa3.11□□□□□ -1.91
SHCBP1-206ENST00000567698 ATL3Q6DD88 541 aa3.11□□□□□ -1.91
SHCBP1-206ENST00000567698 KCNIP4Q6PIL6 250 aa3.11□□□□□ -1.91
SHCBP1-206ENST00000567698 Q6ZVH6 145 aa3.11□□□□□ -1.91
SHCBP1-206ENST00000567698 ARCQ7LC44 396 aa3.11□□□□□ -1.91
SHCBP1-206ENST00000567698 ZNF683Q8IZ20 524 aa3.11□□□□□ -1.91
SHCBP1-206ENST00000567698 TMEM123Q8N131 208 aa3.11□□□□□ -1.91
SHCBP1-206ENST00000567698 SUMF2Q8NBJ7 301 aa3.11□□□□□ -1.91
SHCBP1-206ENST00000567698 ANKRD49Q8WVL7 239 aa3.11□□□□□ -1.91
SHCBP1-206ENST00000567698 TCTEX1D2Q8WW35 142 aa3.11□□□□□ -1.91
SHCBP1-206ENST00000567698 MRPS31Q92665 395 aaKnown RBP3.11□□□□□ -1.91
SHCBP1-206ENST00000567698 THRSPQ92748 146 aa3.11□□□□□ -1.91
SHCBP1-206ENST00000567698 MYDGFQ969H8 173 aa3.11□□□□□ -1.91
SHCBP1-206ENST00000567698 SENP8Q96LD8 212 aa3.11□□□□□ -1.91
SHCBP1-206ENST00000567698 ZNF607Q96SK3 696 aa3.11□□□□□ -1.91
SHCBP1-206ENST00000567698 ASB8Q9H765 288 aa3.11□□□□□ -1.91
SHCBP1-206ENST00000567698 VCPKMTQ9H867 229 aa3.11□□□□□ -1.91
SHCBP1-206ENST00000567698 POPDC2Q9HBU9 364 aa3.11□□□□□ -1.91
SHCBP1-206ENST00000567698 SMOXQ9NWM0 555 aa3.11□□□□□ -1.91
SHCBP1-206ENST00000567698 NEU3Q9UQ49 428 aa3.11□□□□□ -1.91
SHCBP1-206ENST00000567698 MAD1L1Q9Y6D9 718 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms