RNA–Protein interactions for RNA: ENST00000567572.5

CMTM3-214, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-214ENST00000567572 ZNF550Q7Z398 422 aa16.31■□□□□ 0.2
CMTM3-214ENST00000567572 PXKQ7Z7A4 578 aa16.31■□□□□ 0.2
CMTM3-214ENST00000567572 TCTE3Q8IZS6 198 aa16.31■□□□□ 0.2
CMTM3-214ENST00000567572 OR10H4Q8NGA5 316 aa16.31■□□□□ 0.2
CMTM3-214ENST00000567572 NACC2Q96BF6 587 aa16.31■□□□□ 0.2
CMTM3-214ENST00000567572 TGM7Q96PF1 710 aa16.31■□□□□ 0.2
CMTM3-214ENST00000567572 ERVMER34-1Q9H9K5 563 aa16.31■□□□□ 0.2
CMTM3-214ENST00000567572 ADGRL4Q9HBW9 690 aa16.31■□□□□ 0.2
CMTM3-214ENST00000567572 MEPEQ9NQ76 525 aaPredicted RBP16.31■□□□□ 0.2
CMTM3-214ENST00000567572 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.31■□□□□ 0.2
CMTM3-214ENST00000567572 FBXO34Q9NWN3 711 aa16.31■□□□□ 0.2
CMTM3-214ENST00000567572 SERTAD3Q9UJW9 196 aa16.31■□□□□ 0.2
CMTM3-214ENST00000567572 RNF215Q9Y6U7 377 aa16.31■□□□□ 0.2
CMTM3-214ENST00000567572 COL6A3P12111 3177 aa16.31■□□□□ 0.2
CMTM3-214ENST00000567572 LINC00854A0A1B0GVQ3 168 aa16.31■□□□□ 0.2
CMTM3-214ENST00000567572 A0A1B0GVT2 93 aa16.31■□□□□ 0.2
CMTM3-214ENST00000567572 A0A1B0GWA3 101 aa16.31■□□□□ 0.2
CMTM3-214ENST00000567572 SMIM30A4D0T7 59 aa16.31■□□□□ 0.2
CMTM3-214ENST00000567572 A8MU76 341 aa16.31■□□□□ 0.2
CMTM3-214ENST00000567572 SLC43A1O75387 559 aa16.31■□□□□ 0.2
CMTM3-214ENST00000567572 SC5DO75845 299 aa16.31■□□□□ 0.2
CMTM3-214ENST00000567572 SERPINA3P01011 423 aa16.31■□□□□ 0.2
CMTM3-214ENST00000567572 CD1AP06126 327 aa16.31■□□□□ 0.2
CMTM3-214ENST00000567572 CT62P0C5K7 136 aa16.31■□□□□ 0.2
CMTM3-214ENST00000567572 INPP1P49441 399 aa16.31■□□□□ 0.2
CMTM3-214ENST00000567572 CLDN20P56880 219 aa16.31■□□□□ 0.2
CMTM3-214ENST00000567572 EXOSC7Q15024 291 aaKnown RBP16.31■□□□□ 0.2
CMTM3-214ENST00000567572 CDK10Q15131 360 aa16.31■□□□□ 0.2
CMTM3-214ENST00000567572 KLHL12Q53G59 568 aa16.31■□□□□ 0.2
CMTM3-214ENST00000567572 LIX1LQ8IVB5 337 aa16.31■□□□□ 0.2
CMTM3-214ENST00000567572 POMGNT2Q8NAT1 580 aa16.31■□□□□ 0.2
CMTM3-214ENST00000567572 OIT3Q8WWZ8 545 aa16.31■□□□□ 0.2
CMTM3-214ENST00000567572 SENP5Q96HI0 755 aaPredicted RBP16.31■□□□□ 0.2
CMTM3-214ENST00000567572 MFRPQ9BY79 579 aa16.31■□□□□ 0.2
CMTM3-214ENST00000567572 FOLH1BQ9HBA9 442 aa16.31■□□□□ 0.2
CMTM3-214ENST00000567572 DNAJB12Q9NXW2 375 aaKnown RBP16.31■□□□□ 0.2
CMTM3-214ENST00000567572 IGHV5-51A0A0C4DH38 117 aa16.3■□□□□ 0.2
CMTM3-214ENST00000567572 CCDC163A0A0D9SF12 145 aa16.3■□□□□ 0.2
CMTM3-214ENST00000567572 C2orf92A0A1B0GVN3 265 aa16.3■□□□□ 0.2
CMTM3-214ENST00000567572 GXYLT2A0PJZ3 443 aa16.3■□□□□ 0.2
CMTM3-214ENST00000567572 ANKRD61A6NGH8 418 aa16.3■□□□□ 0.2
CMTM3-214ENST00000567572 RHPN2P1A8MT19 583 aa16.3■□□□□ 0.2
CMTM3-214ENST00000567572 FOXS1O43638 330 aa16.3■□□□□ 0.2
CMTM3-214ENST00000567572 ORC5O43913 435 aa16.3■□□□□ 0.2
CMTM3-214ENST00000567572 OR10H2O60403 315 aa16.3■□□□□ 0.2
CMTM3-214ENST00000567572 SSTR4P31391 388 aa16.3■□□□□ 0.2
CMTM3-214ENST00000567572 RFX3P48380 749 aa16.3■□□□□ 0.2
CMTM3-214ENST00000567572 RPS7P62081 194 aaKnown RBP16.3■□□□□ 0.2
CMTM3-214ENST00000567572 ACTA2P62736 377 aa16.3■□□□□ 0.2
CMTM3-214ENST00000567572 ACTG2P63267 376 aa16.3■□□□□ 0.2
CMTM3-214ENST00000567572 GGTLC2Q14390 218 aa16.3■□□□□ 0.2
CMTM3-214ENST00000567572 ZNF141Q15928 474 aa16.3■□□□□ 0.2
CMTM3-214ENST00000567572 ZNF362Q5T0B9 420 aaPredicted RBP16.3■□□□□ 0.2
CMTM3-214ENST00000567572 LINC00114Q6XXX2 140 aa16.3■□□□□ 0.2
CMTM3-214ENST00000567572 VASH1Q7L8A9 365 aaPredicted RBP16.3■□□□□ 0.2
CMTM3-214ENST00000567572 OAFQ86UD1 273 aa16.3■□□□□ 0.2
CMTM3-214ENST00000567572 GATAD2AQ86YP4 633 aa16.3■□□□□ 0.2
CMTM3-214ENST00000567572 SYS1Q8N2H4 156 aa16.3■□□□□ 0.2
CMTM3-214ENST00000567572 OR52R1Q8NGF1 315 aa16.3■□□□□ 0.2
CMTM3-214ENST00000567572 CCNL2Q96S94 520 aaPredicted RBP16.3■□□□□ 0.2
CMTM3-214ENST00000567572 MARVELD1Q9BSK0 173 aa16.3■□□□□ 0.2
CMTM3-214ENST00000567572 HCAR1Q9BXC0 346 aa16.3■□□□□ 0.2
CMTM3-214ENST00000567572 B3GAT2Q9NPZ5 323 aa16.3■□□□□ 0.2
CMTM3-214ENST00000567572 PLCL2Q9UPR0 1127 aa16.3■□□□□ 0.2
CMTM3-214ENST00000567572 RBMX2Q9Y388 322 aaKnown RBP16.3■□□□□ 0.2
CMTM3-214ENST00000567572 NPFFR2Q9Y5X5 522 aa16.3■□□□□ 0.2
CMTM3-214ENST00000567572 A0A0A6YYC8 382 aaPredicted RBP16.29■□□□□ 0.2
CMTM3-214ENST00000567572 FAM240BA0A1B0GVZ2 78 aa16.29■□□□□ 0.2
CMTM3-214ENST00000567572 FAM25AB3EWG3 89 aa16.29■□□□□ 0.2
CMTM3-214ENST00000567572 FAM25CB3EWG5 89 aa16.29■□□□□ 0.2
CMTM3-214ENST00000567572 FAM25GB3EWG6 89 aa16.29■□□□□ 0.2
CMTM3-214ENST00000567572 I3L1I5 382 aaPredicted RBP16.29■□□□□ 0.2
CMTM3-214ENST00000567572 NCR1O76036 304 aa16.29■□□□□ 0.2
CMTM3-214ENST00000567572 NRG3P56975 720 aa16.29■□□□□ 0.2
CMTM3-214ENST00000567572 P2RY14Q15391 338 aa16.29■□□□□ 0.2
CMTM3-214ENST00000567572 ULK3Q6PHR2 472 aa16.29■□□□□ 0.2
CMTM3-214ENST00000567572 TSSK4Q6SA08 328 aa16.29■□□□□ 0.2
CMTM3-214ENST00000567572 SLC25A45Q8N413 288 aa16.29■□□□□ 0.2
CMTM3-214ENST00000567572 CREB3L1Q96BA8 519 aa16.29■□□□□ 0.2
CMTM3-214ENST00000567572 MRPL48Q96GC5 212 aaKnown RBP16.29■□□□□ 0.2
CMTM3-214ENST00000567572 ZDHHC12Q96GR4 267 aa16.29■□□□□ 0.2
CMTM3-214ENST00000567572 ZNF578Q96N58 590 aaPredicted RBP16.29■□□□□ 0.2
CMTM3-214ENST00000567572 G6PC3Q9BUM1 346 aa16.29■□□□□ 0.2
CMTM3-214ENST00000567572 ENKD1Q9H0I2 346 aa16.29■□□□□ 0.2
CMTM3-214ENST00000567572 MED20Q9H944 212 aa16.29■□□□□ 0.2
CMTM3-214ENST00000567572 TMEM165Q9HC07 324 aa16.29■□□□□ 0.2
CMTM3-214ENST00000567572 LRIT1Q9P2V4 623 aa16.29■□□□□ 0.2
CMTM3-214ENST00000567572 EXTL2Q9UBQ6 330 aa16.29■□□□□ 0.2
CMTM3-214ENST00000567572 MRPS33Q9Y291 106 aaKnown RBP16.29■□□□□ 0.2
CMTM3-214ENST00000567572 SIRT4Q9Y6E7 314 aaPredicted RBP16.29■□□□□ 0.2
CMTM3-214ENST00000567572 NPIPA5A0A0B4J1W7 369 aa16.29■□□□□ 0.2
CMTM3-214ENST00000567572 A0A0B4J293 547 aa16.29■□□□□ 0.2
CMTM3-214ENST00000567572 EFCAB7A8K855 629 aa16.29■□□□□ 0.2
CMTM3-214ENST00000567572 NPIPA7E9PJI5 369 aa16.29■□□□□ 0.2
CMTM3-214ENST00000567572 NUDT21O43809 227 aaKnown RBP16.29■□□□□ 0.2
CMTM3-214ENST00000567572 NPIPA8P0DM63 369 aa16.29■□□□□ 0.2
CMTM3-214ENST00000567572 ALAS2P22557 587 aa16.29■□□□□ 0.2
CMTM3-214ENST00000567572 ACAA2P42765 397 aaKnown RBP16.29■□□□□ 0.2
CMTM3-214ENST00000567572 GPR143P51810 404 aa16.29■□□□□ 0.2
CMTM3-214ENST00000567572 IGLV3-21P80748 117 aaPredicted RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms