RNA–Protein interactions for RNA: ENST00000566581.5

LPCAT4-206, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 1 (best)

Gene LPCAT4, Length 915 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-206ENST00000566581 DNPH1O43598 174 aa11.25□□□□□ -0.61
LPCAT4-206ENST00000566581 PMS2P2O95744 297 aa11.25□□□□□ -0.61
LPCAT4-206ENST00000566581 THBS1P07996 1170 aa11.25□□□□□ -0.61
LPCAT4-206ENST00000566581 UQCRBP14927 111 aa11.25□□□□□ -0.61
LPCAT4-206ENST00000566581 PSMB1P20618 241 aaKnown RBP11.25□□□□□ -0.61
LPCAT4-206ENST00000566581 DNASE1P24855 282 aa11.25□□□□□ -0.61
LPCAT4-206ENST00000566581 SLC1A3P43003 542 aa11.25□□□□□ -0.61
LPCAT4-206ENST00000566581 DIO1P49895 249 aa11.25□□□□□ -0.61
LPCAT4-206ENST00000566581 ART1P52961 327 aa11.25□□□□□ -0.61
LPCAT4-206ENST00000566581 RASGEF1BQ0VAM2 473 aa11.25□□□□□ -0.61
LPCAT4-206ENST00000566581 PDK3Q15120 406 aa11.25□□□□□ -0.61
LPCAT4-206ENST00000566581 EXOC3L2Q2M3D2 409 aa11.25□□□□□ -0.61
LPCAT4-206ENST00000566581 SLC2A7Q6PXP3 512 aa11.25□□□□□ -0.61
LPCAT4-206ENST00000566581 HMGN2P46Q86SG4 172 aa11.25□□□□□ -0.61
LPCAT4-206ENST00000566581 MTDHQ86UE4 582 aaKnown RBP11.25□□□□□ -0.61
LPCAT4-206ENST00000566581 OR52P1PQ8NH57 321 aa11.25□□□□□ -0.61
LPCAT4-206ENST00000566581 MBD6Q96DN6 1003 aa11.25□□□□□ -0.61
LPCAT4-206ENST00000566581 FOXC2Q99958 501 aa11.25□□□□□ -0.61
LPCAT4-206ENST00000566581 PSD2Q9BQI7 771 aa11.25□□□□□ -0.61
LPCAT4-206ENST00000566581 SIKE1Q9BRV8 207 aa11.25□□□□□ -0.61
LPCAT4-206ENST00000566581 HDHD5Q9BXW7 423 aa11.25□□□□□ -0.61
LPCAT4-206ENST00000566581 KLHL4Q9C0H6 718 aa11.25□□□□□ -0.61
LPCAT4-206ENST00000566581 ADAM19Q9H013 955 aa11.25□□□□□ -0.61
LPCAT4-206ENST00000566581 RABEP2Q9H5N1 569 aa11.25□□□□□ -0.61
LPCAT4-206ENST00000566581 BCL2L10Q9HD36 194 aa11.25□□□□□ -0.61
LPCAT4-206ENST00000566581 A4GALTQ9NPC4 353 aa11.25□□□□□ -0.61
LPCAT4-206ENST00000566581 ING1Q9UK53 422 aaPredicted RBP11.25□□□□□ -0.61
LPCAT4-206ENST00000566581 TRAPPC4Q9Y296 219 aa11.25□□□□□ -0.61
LPCAT4-206ENST00000566581 GPR52Q9Y2T5 361 aa11.25□□□□□ -0.61
LPCAT4-206ENST00000566581 A0A1W2PPR1 153 aa11.24□□□□□ -0.61
LPCAT4-206ENST00000566581 SIAH2O43255 324 aa11.24□□□□□ -0.61
LPCAT4-206ENST00000566581 ZNF208O43345 1280 aa11.24□□□□□ -0.61
LPCAT4-206ENST00000566581 EDF1O60869 148 aaKnown RBP11.24□□□□□ -0.61
LPCAT4-206ENST00000566581 BCHEP06276 602 aa11.24□□□□□ -0.61
LPCAT4-206ENST00000566581 TFPIP10646 304 aa11.24□□□□□ -0.61
LPCAT4-206ENST00000566581 PPIBP23284 216 aaKnown RBP11.24□□□□□ -0.61
LPCAT4-206ENST00000566581 ACAA2P42765 397 aaKnown RBP11.24□□□□□ -0.61
LPCAT4-206ENST00000566581 POLR2HP52434 150 aaKnown RBP11.24□□□□□ -0.61
LPCAT4-206ENST00000566581 EPS8Q12929 822 aa11.24□□□□□ -0.61
LPCAT4-206ENST00000566581 SQLEQ14534 574 aa11.24□□□□□ -0.61
LPCAT4-206ENST00000566581 LARS2Q15031 903 aaKnown RBP11.24□□□□□ -0.61
LPCAT4-206ENST00000566581 LIN52Q52LA3 116 aa11.24□□□□□ -0.61
LPCAT4-206ENST00000566581 AGKQ53H12 422 aa11.24□□□□□ -0.61
LPCAT4-206ENST00000566581 RNF220Q5VTB9 566 aa11.24□□□□□ -0.61
LPCAT4-206ENST00000566581 PAMR1Q6UXH9 720 aa11.24□□□□□ -0.61
LPCAT4-206ENST00000566581 TFAP2EQ6VUC0 442 aa11.24□□□□□ -0.61
LPCAT4-206ENST00000566581 C22orf34Q6ZV56 151 aa11.24□□□□□ -0.61
LPCAT4-206ENST00000566581 NUFIP2Q7Z417 695 aaKnown RBP11.24□□□□□ -0.61
LPCAT4-206ENST00000566581 GABRG1Q8N1C3 465 aa11.24□□□□□ -0.61
LPCAT4-206ENST00000566581 TMEM19Q96HH6 336 aa11.24□□□□□ -0.61
LPCAT4-206ENST00000566581 ARL5BQ96KC2 179 aa11.24□□□□□ -0.61
LPCAT4-206ENST00000566581 ARMC7Q9H6L4 198 aa11.24□□□□□ -0.61
LPCAT4-206ENST00000566581 C12orf49Q9H741 205 aa11.24□□□□□ -0.61
LPCAT4-206ENST00000566581 CCM2LQ9NUG4 571 aaPredicted RBP11.24□□□□□ -0.61
LPCAT4-206ENST00000566581 RLIMQ9NVW2 624 aa11.24□□□□□ -0.61
LPCAT4-206ENST00000566581 SLC25A37Q9NYZ2 338 aa11.24□□□□□ -0.61
LPCAT4-206ENST00000566581 OSGIN1Q9UJX0 560 aa11.24□□□□□ -0.61
LPCAT4-206ENST00000566581 IFT52Q9Y366 437 aa11.24□□□□□ -0.61
LPCAT4-206ENST00000566581 NIPBLQ6KC79 2804 aaeCLIP11.23□□□□□ -0.61
LPCAT4-206ENST00000566581 IGKV3D-15A0A087WSY6 115 aa11.23□□□□□ -0.61
LPCAT4-206ENST00000566581 TRBV5-3A0A0A0MS03 114 aa11.23□□□□□ -0.61
LPCAT4-206ENST00000566581 TMED7-TICAM2A0A0A6YYA0 188 aa11.23□□□□□ -0.61
LPCAT4-206ENST00000566581 IGHV3-15A0A0B4J1V0 119 aa11.23□□□□□ -0.61
LPCAT4-206ENST00000566581 A0A1W2PP18 115 aa11.23□□□□□ -0.61
LPCAT4-206ENST00000566581 NR5A2O00482 541 aa11.23□□□□□ -0.61
LPCAT4-206ENST00000566581 AP3D1O14617 1153 aa11.23□□□□□ -0.61
LPCAT4-206ENST00000566581 GCM2O75603 506 aaPredicted RBP11.23□□□□□ -0.61
LPCAT4-206ENST00000566581 CNOT4O95628 575 aaKnown RBP11.23□□□□□ -0.61
LPCAT4-206ENST00000566581 RAF1P04049 648 aa11.23□□□□□ -0.61
LPCAT4-206ENST00000566581 ETS2P15036 469 aa11.23□□□□□ -0.61
LPCAT4-206ENST00000566581 GPX2P18283 190 aa11.23□□□□□ -0.61
LPCAT4-206ENST00000566581 TACR3P29371 465 aa11.23□□□□□ -0.61
LPCAT4-206ENST00000566581 OR3A2P47893 321 aa11.23□□□□□ -0.61
LPCAT4-206ENST00000566581 H3F3AP84243 136 aa11.23□□□□□ -0.61
LPCAT4-206ENST00000566581 P2RY6Q15077 328 aa11.23□□□□□ -0.61
LPCAT4-206ENST00000566581 PAGE3Q5JUK9 113 aa11.23□□□□□ -0.61
LPCAT4-206ENST00000566581 METTL21CQ5VZV1 264 aa11.23□□□□□ -0.61
LPCAT4-206ENST00000566581 ANKRD34AQ69YU3 496 aa11.23□□□□□ -0.61
LPCAT4-206ENST00000566581 ZNF836Q6ZNA1 936 aa11.23□□□□□ -0.61
LPCAT4-206ENST00000566581 ZNF550Q7Z398 422 aa11.23□□□□□ -0.61
LPCAT4-206ENST00000566581 VRK2Q86Y07 508 aa11.23□□□□□ -0.61
LPCAT4-206ENST00000566581 MSRB3Q8IXL7 192 aa11.23□□□□□ -0.61
LPCAT4-206ENST00000566581 CLIP4Q8N3C7 705 aa11.23□□□□□ -0.61
LPCAT4-206ENST00000566581 STEAP2Q8NFT2 490 aa11.23□□□□□ -0.61
LPCAT4-206ENST00000566581 TSPEARQ8WU66 669 aa11.23□□□□□ -0.61
LPCAT4-206ENST00000566581 SLC35B4Q969S0 331 aa11.23□□□□□ -0.61
LPCAT4-206ENST00000566581 DDIT4LQ96D03 193 aa11.23□□□□□ -0.61
LPCAT4-206ENST00000566581 ZHX1-C8orf76Q96EF9 292 aa11.23□□□□□ -0.61
LPCAT4-206ENST00000566581 ALPK1Q96QP1 1244 aa11.23□□□□□ -0.61
LPCAT4-206ENST00000566581 USB1Q9BQ65 265 aaKnown RBP11.23□□□□□ -0.61
LPCAT4-206ENST00000566581 SPATA9Q9BWV2 254 aa11.23□□□□□ -0.61
LPCAT4-206ENST00000566581 VAPAQ9P0L0 249 aa11.23□□□□□ -0.61
LPCAT4-206ENST00000566581 SLAMF8Q9P0V8 285 aa11.23□□□□□ -0.61
LPCAT4-206ENST00000566581 TMEM181Q9P2C4 612 aa11.23□□□□□ -0.61
LPCAT4-206ENST00000566581 TRIM33Q9UPN9 1127 aa11.23□□□□□ -0.61
LPCAT4-206ENST00000566581 ZNF443Q9Y2A4 671 aaPredicted RBP11.23□□□□□ -0.61
LPCAT4-206ENST00000566581 PLEKHA6Q9Y2H5 1048 aa11.23□□□□□ -0.61
LPCAT4-206ENST00000566581 TMED7Q9Y3B3 224 aa11.23□□□□□ -0.61
LPCAT4-206ENST00000566581 ZNF469Q96JG9 3925 aaPredicted RBP11.23□□□□□ -0.61
LPCAT4-206ENST00000566581 ZNF814B7Z6K7 855 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms