RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 KIFAP3Q92845 792 aa1.06□□□□□ -2.24
SMG1-212ENST00000566328 RIT1Q92963 219 aa1.06□□□□□ -2.24
SMG1-212ENST00000566328 MYLPFQ96A32 169 aa1.06□□□□□ -2.24
SMG1-212ENST00000566328 HPDLQ96IR7 371 aa1.06□□□□□ -2.24
SMG1-212ENST00000566328 ACCSQ96QU6 501 aa1.06□□□□□ -2.24
SMG1-212ENST00000566328 NAP1L4Q99733 375 aaKnown RBP1.06□□□□□ -2.24
SMG1-212ENST00000566328 ADPGKQ9BRR6 497 aa1.06□□□□□ -2.24
SMG1-212ENST00000566328 TMEM175Q9BSA9 504 aa1.06□□□□□ -2.24
SMG1-212ENST00000566328 CRACR2AQ9BSW2 395 aa1.06□□□□□ -2.24
SMG1-212ENST00000566328 CCDC94Q9BW85 323 aaPredicted RBP1.06□□□□□ -2.24
SMG1-212ENST00000566328 HCAR1Q9BXC0 346 aa1.06□□□□□ -2.24
SMG1-212ENST00000566328 MRPL9Q9BYD2 267 aaKnown RBP1.06□□□□□ -2.24
SMG1-212ENST00000566328 NFKBIZQ9BYH8 718 aa1.06□□□□□ -2.24
SMG1-212ENST00000566328 C2orf40Q9H1Z8 148 aa1.06□□□□□ -2.24
SMG1-212ENST00000566328 PARVGQ9HBI0 331 aa1.06□□□□□ -2.24
SMG1-212ENST00000566328 ZFP14Q9HCL3 533 aa1.06□□□□□ -2.24
SMG1-212ENST00000566328 APMAPQ9HDC9 416 aa1.06□□□□□ -2.24
SMG1-212ENST00000566328 GPR173Q9NS66 373 aa1.06□□□□□ -2.24
SMG1-212ENST00000566328 FAM49BQ9NUQ9 324 aa1.06□□□□□ -2.24
SMG1-212ENST00000566328 DUS2Q9NX74 493 aaKnown RBP1.06□□□□□ -2.24
SMG1-212ENST00000566328 RBAKQ9NYW8 714 aaPredicted RBP1.06□□□□□ -2.24
SMG1-212ENST00000566328 EPS15L1Q9UBC2 864 aa1.06□□□□□ -2.24
SMG1-212ENST00000566328 MTRRQ9UBK8 725 aa1.06□□□□□ -2.24
SMG1-212ENST00000566328 CDH7Q9ULB5 785 aa1.06□□□□□ -2.24
SMG1-212ENST00000566328 DUSP12Q9UNI6 340 aa1.06□□□□□ -2.24
SMG1-212ENST00000566328 SCML2Q9UQR0 700 aa1.06□□□□□ -2.24
SMG1-212ENST00000566328 CCL27Q9Y4X3 112 aa1.06□□□□□ -2.24
SMG1-212ENST00000566328 OR1A2Q9Y585 309 aa1.06□□□□□ -2.24
SMG1-212ENST00000566328 SNX10Q9Y5X0 201 aa1.06□□□□□ -2.24
SMG1-212ENST00000566328 DYNC1LI1Q9Y6G9 523 aaKnown RBP1.06□□□□□ -2.24
SMG1-212ENST00000566328 SLCO1B1Q9Y6L6 691 aa1.06□□□□□ -2.24
SMG1-212ENST00000566328 PRRC2CQ9Y520 2896 aaKnown RBP1.06□□□□□ -2.24
SMG1-212ENST00000566328 ANAPC1Q9H1A4 1944 aa1.06□□□□□ -2.24
SMG1-212ENST00000566328 EML5Q05BV3 1969 aa1.06□□□□□ -2.24
SMG1-212ENST00000566328 SHROOM3Q8TF72 1996 aa1.06□□□□□ -2.24
SMG1-212ENST00000566328 PCDH15Q96QU1 1955 aa1.06□□□□□ -2.24
SMG1-212ENST00000566328 KALRNO60229 2985 aa1.06□□□□□ -2.24
SMG1-212ENST00000566328 CLUHO75153 1309 aa1.06□□□□□ -2.24
SMG1-212ENST00000566328 SF3B1O75533 1304 aaKnown RBP eCLIP1.06□□□□□ -2.24
SMG1-212ENST00000566328 CEP250Q9BV73 2442 aa1.06□□□□□ -2.24
SMG1-212ENST00000566328 PIEZO1Q92508 2521 aa1.06□□□□□ -2.24
SMG1-212ENST00000566328 COL5A1P20908 1838 aaPredicted RBP1.05□□□□□ -2.24
SMG1-212ENST00000566328 SPAG17Q6Q759 2223 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 PDCD11Q14690 1871 aaKnown RBP1.05□□□□□ -2.24
SMG1-212ENST00000566328 RALGAPA2Q2PPJ7 1873 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 HELZP42694 1942 aaKnown RBP1.05□□□□□ -2.24
SMG1-212ENST00000566328 GREB1Q4ZG55 1949 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 DENND4CQ5VZ89 1909 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 TICRRQ7Z2Z1 1910 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 CEP192Q8TEP8 1941 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 SYNJ2BP-COX16A0A087WUM0 186 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 A0A087WV48 116 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 A0A0U1RQS6 177 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 SPAARA0A1B0GVQ0 90 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 MACROD2A1Z1Q3 448 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 LRRD1A4D1F6 860 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 FAM149AA5PLN7 773 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 URADA6NGE7 173 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 FAM47DPA6NHR8 397 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 ZNF233A6NK53 670 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 USP27XA6NNY8 438 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 LRRIQ3A6PVS8 624 aaPredicted RBP1.05□□□□□ -2.24
SMG1-212ENST00000566328 YJEFN3A6XGL0 299 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 FAM166BA8MTA8 275 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 A8MXQ7 604 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 SPECC1L-ADORA2AF8WAN1 911 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 SGK1O00141 431 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 IMPA2O14732 288 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 NBR2O15453 112 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 TRAPPC3O43617 180 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 DKC1O60832 514 aaKnown RBP eCLIP1.05□□□□□ -2.24
SMG1-212ENST00000566328 ECI2O75521 394 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 AKAP3O75969 853 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 SIX3O95343 332 aaPredicted RBP1.05□□□□□ -2.24
SMG1-212ENST00000566328 KLF8O95600 359 aaPredicted RBP1.05□□□□□ -2.24
SMG1-212ENST00000566328 HLA-DRAP01903 254 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 RPN1P04843 607 aaKnown RBP1.05□□□□□ -2.24
SMG1-212ENST00000566328 CISD3P0C7P0 127 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 MBL2P11226 248 aaPredicted RBP1.05□□□□□ -2.24
SMG1-212ENST00000566328 TDGF1P13385 188 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 HLA-EP13747 358 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 CMA1P23946 247 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 LONP1P36776 959 aaKnown RBP1.05□□□□□ -2.24
SMG1-212ENST00000566328 OPRD1P41143 372 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 NBL1P41271 181 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 CXCL12P48061 93 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 DHPSP49366 369 aaPredicted RBP1.05□□□□□ -2.24
SMG1-212ENST00000566328 TUFMP49411 452 aaKnown RBP1.05□□□□□ -2.24
SMG1-212ENST00000566328 CSNK1EP49674 416 aaKnown RBP1.05□□□□□ -2.24
SMG1-212ENST00000566328 KLK7P49862 253 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 SGSHP51688 502 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 METAP1P53582 386 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 UCP2P55851 309 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 NUP107P57740 925 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 RPS24P62847 133 aaKnown RBP1.05□□□□□ -2.24
SMG1-212ENST00000566328 CDKL1Q00532 357 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 IL9RQ01113 521 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 SEMG2Q02383 582 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 KDSRQ06136 332 aa1.05□□□□□ -2.24
SMG1-212ENST00000566328 CYP24A1Q07973 514 aa1.05□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms