RNA–Protein interactions for RNA: ENST00000565912.1

CX3CL1-204, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 1 (best) BASIC

Gene CX3CL1, Length 5,796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-204ENST00000565912 SIGLEC6O43699 453 aa12.71□□□□□ -0.37
CX3CL1-204ENST00000565912 PRICKLE3O43900 615 aaPredicted RBP12.71□□□□□ -0.37
CX3CL1-204ENST00000565912 PTGER4P35408 488 aa12.71□□□□□ -0.37
CX3CL1-204ENST00000565912 TRA2BP62995 288 aaKnown RBP12.71□□□□□ -0.37
CX3CL1-204ENST00000565912 ZNF169Q14929 603 aaPredicted RBP12.71□□□□□ -0.37
CX3CL1-204ENST00000565912 SYPL1Q16563 259 aa12.71□□□□□ -0.37
CX3CL1-204ENST00000565912 FAM160A2Q8N612 972 aaPredicted RBP12.71□□□□□ -0.37
CX3CL1-204ENST00000565912 MRPL43Q8N983 215 aaKnown RBP12.71□□□□□ -0.37
CX3CL1-204ENST00000565912 STEAP2Q8NFT2 490 aa12.71□□□□□ -0.37
CX3CL1-204ENST00000565912 BRIX1Q8TDN6 353 aaKnown RBP12.71□□□□□ -0.37
CX3CL1-204ENST00000565912 HHIPL1Q96JK4 782 aa12.71□□□□□ -0.37
CX3CL1-204ENST00000565912 NTMT1Q9BV86 223 aa12.71□□□□□ -0.37
CX3CL1-204ENST00000565912 MYH13Q9UKX3 1938 aa12.71□□□□□ -0.37
CX3CL1-204ENST00000565912 HPGDSO60760 199 aa12.71□□□□□ -0.37
CX3CL1-204ENST00000565912 SEC14L2O76054 403 aa12.71□□□□□ -0.37
CX3CL1-204ENST00000565912 TP53P04637 393 aaPredicted RBP12.71□□□□□ -0.37
CX3CL1-204ENST00000565912 HOXB5P09067 269 aa12.71□□□□□ -0.37
CX3CL1-204ENST00000565912 GPX3P22352 226 aa12.71□□□□□ -0.37
CX3CL1-204ENST00000565912 MAGEA6P43360 314 aa12.71□□□□□ -0.37
CX3CL1-204ENST00000565912 GAB1Q13480 694 aa12.71□□□□□ -0.37
CX3CL1-204ENST00000565912 FAM69AQ5T7M9 428 aa12.71□□□□□ -0.37
CX3CL1-204ENST00000565912 CYP4V2Q6ZWL3 525 aaPredicted RBP12.71□□□□□ -0.37
CX3CL1-204ENST00000565912 TEX19Q8NA77 164 aa12.71□□□□□ -0.37
CX3CL1-204ENST00000565912 ZFAND1Q8TCF1 268 aa12.71□□□□□ -0.37
CX3CL1-204ENST00000565912 TMIGD2Q96BF3 282 aa12.71□□□□□ -0.37
CX3CL1-204ENST00000565912 SIDT1Q9NXL6 827 aaKnown RBP12.71□□□□□ -0.37
CX3CL1-204ENST00000565912 EHFQ9NZC4 300 aa12.71□□□□□ -0.37
CX3CL1-204ENST00000565912 RASD1Q9Y272 281 aa12.71□□□□□ -0.37
CX3CL1-204ENST00000565912 KITLGP21583 273 aa12.71□□□□□ -0.37
CX3CL1-204ENST00000565912 RPE65Q16518 533 aa12.71□□□□□ -0.37
CX3CL1-204ENST00000565912 DCAF12Q5T6F0 453 aa12.71□□□□□ -0.37
CX3CL1-204ENST00000565912 PRAMEF20Q5VT98 475 aa12.71□□□□□ -0.37
CX3CL1-204ENST00000565912 TMEM185AQ8NFB2 350 aa12.71□□□□□ -0.37
CX3CL1-204ENST00000565912 SGK3Q96BR1 496 aa12.71□□□□□ -0.37
CX3CL1-204ENST00000565912 NGBQ9NPG2 151 aa12.71□□□□□ -0.37
CX3CL1-204ENST00000565912 C17orf113A0A1B0GUU1 675 aa12.71□□□□□ -0.38
CX3CL1-204ENST00000565912 TSPAN11A1L157 253 aa12.71□□□□□ -0.38
CX3CL1-204ENST00000565912 CHATP28329 748 aa12.71□□□□□ -0.38
CX3CL1-204ENST00000565912 OPRL1P41146 370 aa12.71□□□□□ -0.38
CX3CL1-204ENST00000565912 CLDN6P56747 220 aa12.71□□□□□ -0.38
CX3CL1-204ENST00000565912 PIWIL3Q7Z3Z3 882 aaKnown RBP12.71□□□□□ -0.38
CX3CL1-204ENST00000565912 LMNTD1Q8N9Z9 388 aa12.71□□□□□ -0.38
CX3CL1-204ENST00000565912 OR2A12Q8NGT7 310 aa12.71□□□□□ -0.38
CX3CL1-204ENST00000565912 HAS2Q92819 552 aa12.71□□□□□ -0.38
CX3CL1-204ENST00000565912 ANKRD60Q9BZ19 345 aa12.71□□□□□ -0.38
CX3CL1-204ENST00000565912 OR51J1Q9H342 316 aa12.71□□□□□ -0.38
CX3CL1-204ENST00000565912 BLACEA4D250 179 aa12.71□□□□□ -0.38
CX3CL1-204ENST00000565912 PAN3Q58A45 887 aaKnown RBP12.71□□□□□ -0.38
CX3CL1-204ENST00000565912 OR1J4Q8NGS1 313 aa12.71□□□□□ -0.38
CX3CL1-204ENST00000565912 FIZ1Q96SL8 496 aa12.71□□□□□ -0.38
CX3CL1-204ENST00000565912 INSM2Q96T92 566 aaPredicted RBP12.71□□□□□ -0.38
CX3CL1-204ENST00000565912 SLC29A1Q99808 456 aa12.71□□□□□ -0.38
CX3CL1-204ENST00000565912 CMSS1Q9BQ75 279 aaKnown RBP12.71□□□□□ -0.38
CX3CL1-204ENST00000565912 NMNAT2Q9BZQ4 307 aa12.71□□□□□ -0.38
CX3CL1-204ENST00000565912 KRBA1A5PL33 1030 aa12.7□□□□□ -0.38
CX3CL1-204ENST00000565912 H0YGG7 62 aa12.7□□□□□ -0.38
CX3CL1-204ENST00000565912 SOCS6O14544 535 aa12.7□□□□□ -0.38
CX3CL1-204ENST00000565912 PRAF2O60831 178 aa12.7□□□□□ -0.38
CX3CL1-204ENST00000565912 IVDP26440 423 aa12.7□□□□□ -0.38
CX3CL1-204ENST00000565912 KCNJ10P78508 379 aa12.7□□□□□ -0.38
CX3CL1-204ENST00000565912 GK3PQ14409 553 aa12.7□□□□□ -0.38
CX3CL1-204ENST00000565912 PGGHGQ32M88 737 aa12.7□□□□□ -0.38
CX3CL1-204ENST00000565912 AGBL5Q8NDL9 886 aa12.7□□□□□ -0.38
CX3CL1-204ENST00000565912 OR11L1Q8NGX0 322 aa12.7□□□□□ -0.38
CX3CL1-204ENST00000565912 TMEM163Q8TC26 289 aa12.7□□□□□ -0.38
CX3CL1-204ENST00000565912 SORCS2Q96PQ0 1159 aa12.7□□□□□ -0.38
CX3CL1-204ENST00000565912 TIMM8AO60220 97 aaPredicted RBP12.7□□□□□ -0.38
CX3CL1-204ENST00000565912 PKLRP30613 574 aa12.7□□□□□ -0.38
CX3CL1-204ENST00000565912 RPL35P42766 123 aaKnown RBP12.7□□□□□ -0.38
CX3CL1-204ENST00000565912 NOVP48745 357 aa12.7□□□□□ -0.38
CX3CL1-204ENST00000565912 CLDN17P56750 224 aa12.7□□□□□ -0.38
CX3CL1-204ENST00000565912 GSCP56915 257 aaPredicted RBP12.7□□□□□ -0.38
CX3CL1-204ENST00000565912 MRPS10P82664 201 aaKnown RBP12.7□□□□□ -0.38
CX3CL1-204ENST00000565912 DUSP7Q16829 419 aa12.7□□□□□ -0.38
CX3CL1-204ENST00000565912 METAP1DQ6UB28 335 aaPredicted RBP12.7□□□□□ -0.38
CX3CL1-204ENST00000565912 NDUFAF7Q7L592 441 aa12.7□□□□□ -0.38
CX3CL1-204ENST00000565912 PM20D2Q8IYS1 436 aa12.7□□□□□ -0.38
CX3CL1-204ENST00000565912 C12orf45Q8N5I9 185 aaPredicted RBP12.7□□□□□ -0.38
CX3CL1-204ENST00000565912 OR4N2Q8NGD1 307 aa12.7□□□□□ -0.38
CX3CL1-204ENST00000565912 OR8J2Q8NGG1 315 aa12.7□□□□□ -0.38
CX3CL1-204ENST00000565912 FBXO27Q8NI29 283 aa12.7□□□□□ -0.38
CX3CL1-204ENST00000565912 SLC25A31Q9H0C2 315 aa12.7□□□□□ -0.38
CX3CL1-204ENST00000565912 METTL9Q9H1A3 318 aa12.7□□□□□ -0.38
CX3CL1-204ENST00000565912 TCHHQ07283 1943 aa12.7□□□□□ -0.38
CX3CL1-204ENST00000565912 HSPB6O14558 160 aa12.7□□□□□ -0.38
CX3CL1-204ENST00000565912 BET1O15155 118 aa12.7□□□□□ -0.38
CX3CL1-204ENST00000565912 GPR137BO60478 399 aa12.7□□□□□ -0.38
CX3CL1-204ENST00000565912 ARAFP10398 606 aa12.7□□□□□ -0.38
CX3CL1-204ENST00000565912 CHRNB1P11230 501 aa12.7□□□□□ -0.38
CX3CL1-204ENST00000565912 TPT1P13693 172 aaKnown RBP12.7□□□□□ -0.38
CX3CL1-204ENST00000565912 EVI2BP34910 448 aa12.7□□□□□ -0.38
CX3CL1-204ENST00000565912 PRLHRP49683 370 aa12.7□□□□□ -0.38
CX3CL1-204ENST00000565912 RUNX2Q13950 521 aa12.7□□□□□ -0.38
CX3CL1-204ENST00000565912 DMBX1Q8NFW5 382 aa12.7□□□□□ -0.38
CX3CL1-204ENST00000565912 PAQR8Q8TEZ7 354 aa12.7□□□□□ -0.38
CX3CL1-204ENST00000565912 UTP23Q9BRU9 249 aaKnown RBP12.7□□□□□ -0.38
CX3CL1-204ENST00000565912 TRAPPC2LQ9UL33 140 aa12.7□□□□□ -0.38
CX3CL1-204ENST00000565912 NME7Q9Y5B8 376 aa12.7□□□□□ -0.38
CX3CL1-204ENST00000565912 SLC22A7Q9Y694 548 aa12.7□□□□□ -0.38
CX3CL1-204ENST00000565912 HIDE1A8MVS5 230 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms