RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 GPANK1O95872 356 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 TNFP01375 233 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 NR2F1P10589 423 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 ENGP17813 658 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 TAS2R38P59533 333 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 PLGLAQ15195 96 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 TOMM20Q15388 145 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 MLF2Q15773 248 aaPredicted RBP3.13□□□□□ -1.91
CHD9-213ENST00000564845 ABCA11PQ4W5N1 156 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 ANKRD54Q6NXT1 300 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 TSPYL5Q86VY4 417 aaPredicted RBP3.13□□□□□ -1.91
CHD9-213ENST00000564845 PHC2Q8IXK0 858 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 CISD2Q8N5K1 135 aaKnown RBP3.13□□□□□ -1.91
CHD9-213ENST00000564845 OR51L1Q8NGJ5 315 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 OR2AJ1Q8NGZ0 328 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 NFKBIDQ8NI38 313 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.13□□□□□ -1.912e-24■■■■■ 59.8
CHD9-213ENST00000564845 STT3BQ8TCJ2 826 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 TMBIM1Q969X1 311 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 TIMM29Q9BSF4 260 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 DPH7Q9BTV6 452 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 ACOD1A6NK06 481 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 CLDN25C9JDP6 229 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 K7EQS6 105 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 PTTG1O95997 202 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 PAHP00439 452 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 FPR1P21462 350 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 MAPK12P53778 367 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 BLMHQ13867 455 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 WSCD2Q2TBF2 565 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 AGAP6Q5VW22 663 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 TMPPEQ6ZT21 453 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 PDSS2Q86YH6 399 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 PQLC1Q8N2U9 271 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 OR2T33Q8NG76 320 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 OR5T2Q8NGG2 359 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 UTP15Q8TED0 518 aaKnown RBP3.13□□□□□ -1.91
CHD9-213ENST00000564845 ZNF566Q969W8 418 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 RBMXL1Q96E39 390 aaKnown RBP3.13□□□□□ -1.91
CHD9-213ENST00000564845 C11orf24Q96F05 449 aaPredicted RBP3.13□□□□□ -1.91
CHD9-213ENST00000564845 NRSN2Q9GZP1 204 aa3.13□□□□□ -1.91
CHD9-213ENST00000564845 PRSS51A0A1B0GVH4 220 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 FAM183AA6NL82 134 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 M0R3H8 397 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 FLRT2O43155 660 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 ENTPD6O75354 484 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 SOD1P00441 154 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 ANXA4P09525 319 aaPredicted RBP3.12□□□□□ -1.91
CHD9-213ENST00000564845 AOC1P19801 751 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 NPR2P20594 1047 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 SLC7A1P30825 629 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 IDH2P48735 452 aaKnown RBP3.12□□□□□ -1.91
CHD9-213ENST00000564845 SIM1P81133 766 aaPredicted RBP3.12□□□□□ -1.91
CHD9-213ENST00000564845 C5orf22Q49AR2 442 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 TMEM196Q5HYL7 178 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 C9orf64Q5T6V5 341 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 TIGD3Q6B0B8 471 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 TYW3Q6IPR3 259 aaKnown RBP3.12□□□□□ -1.91
CHD9-213ENST00000564845 PODNL1Q6PEZ8 512 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 TMEM107Q6UX40 140 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 TEX26Q8N6G2 289 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 OR52E4Q8NGH9 312 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 COQ8AQ8NI60 647 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 XAGE5Q8WWM1 108 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 RAD9AQ99638 391 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 GAL3ST1Q99999 423 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 TNFRSF10DQ9UBN6 386 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 TBC1D29Q9UFV1 150 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 MN1Q10571 1320 aaPredicted RBP3.12□□□□□ -1.91
CHD9-213ENST00000564845 C2CD4DB7Z1M9 353 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 TNFRSF10CO14798 259 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 SMAD9O15198 467 aaKnown RBP3.12□□□□□ -1.91
CHD9-213ENST00000564845 GRPRP30550 384 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 CCR9P51686 369 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 TAS2R20P59543 309 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 GGTA1PQ4G0N0 100 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 FGD3Q5JSP0 725 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 CDCP2Q5VXM1 449 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 PAQR6Q6TCH4 344 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 ARL14Q8N4G2 192 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.12□□□□□ -1.91
CHD9-213ENST00000564845 UBL7Q96S82 380 aaPredicted RBP3.12□□□□□ -1.91
CHD9-213ENST00000564845 SLC25A21Q9BQT8 299 aaPredicted RBP3.12□□□□□ -1.91
CHD9-213ENST00000564845 SLC6A20Q9NP91 592 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 ABCB10Q9NRK6 738 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 ANAPC1Q9H1A4 1944 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 WASH4PA8MWX3 477 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 WNT11O96014 354 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 MPC1LP0DKB6 136 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 ALAS2P22557 587 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 IMPA1P29218 277 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 AHRP35869 848 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 RAB28P51157 221 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 ATP5IP56385 69 aaPredicted RBP3.12□□□□□ -1.91
CHD9-213ENST00000564845 RPS7P62081 194 aaKnown RBP3.12□□□□□ -1.91
CHD9-213ENST00000564845 ADAM15Q13444 863 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 ENPP2Q13822 863 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 GPR19Q15760 415 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 CCDC58Q4VC31 144 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 AGTRAPQ6RW13 159 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms