RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 BTBD16Q32M84 506 aa7.05□□□□□ -1.28
ATXN3-249ENST00000564606 CDONQ4KMG0 1287 aa7.05□□□□□ -1.28
ATXN3-249ENST00000564606 DEFB134Q4QY38 66 aa7.05□□□□□ -1.28
ATXN3-249ENST00000564606 PLA1AQ53H76 456 aa7.05□□□□□ -1.28
ATXN3-249ENST00000564606 PRRT3Q5FWE3 981 aa7.05□□□□□ -1.28
ATXN3-249ENST00000564606 ALG10BQ5I7T1 473 aa7.05□□□□□ -1.28
ATXN3-249ENST00000564606 EXOSC6Q5RKV6 272 aaKnown RBP7.05□□□□□ -1.28
ATXN3-249ENST00000564606 TMEM240Q5SV17 173 aa7.05□□□□□ -1.28
ATXN3-249ENST00000564606 COL13A1Q5TAT6 717 aaPredicted RBP7.05□□□□□ -1.28
ATXN3-249ENST00000564606 GPR139Q6DWJ6 353 aa7.05□□□□□ -1.28
ATXN3-249ENST00000564606 ANKRD54Q6NXT1 300 aa7.05□□□□□ -1.28
ATXN3-249ENST00000564606 C5orf46Q6UWT4 87 aa7.05□□□□□ -1.28
ATXN3-249ENST00000564606 TMEM91Q6ZNR0 172 aa7.05□□□□□ -1.28
ATXN3-249ENST00000564606 RNF44Q7L0R7 432 aa7.05□□□□□ -1.28
ATXN3-249ENST00000564606 C11orf74Q86VG3 221 aa7.05□□□□□ -1.28
ATXN3-249ENST00000564606 FAM20CQ8IXL6 584 aa7.05□□□□□ -1.28
ATXN3-249ENST00000564606 SLC35F2Q8IXU6 374 aa7.05□□□□□ -1.28
ATXN3-249ENST00000564606 ZNF295-AS1Q8N0V1 137 aa7.05□□□□□ -1.28
ATXN3-249ENST00000564606 FBXL6Q8N531 539 aa7.05□□□□□ -1.28
ATXN3-249ENST00000564606 FAM71CQ8NEG0 241 aa7.05□□□□□ -1.28
ATXN3-249ENST00000564606 OR6C4Q8NGE1 309 aa7.05□□□□□ -1.28
ATXN3-249ENST00000564606 OR8H1Q8NGG4 311 aa7.05□□□□□ -1.28
ATXN3-249ENST00000564606 C1orf216Q8TAB5 229 aa7.05□□□□□ -1.28
ATXN3-249ENST00000564606 ZNF417Q8TAU3 575 aa7.05□□□□□ -1.28
ATXN3-249ENST00000564606 BAHD1Q8TBE0 780 aaPredicted RBP7.05□□□□□ -1.28
ATXN3-249ENST00000564606 SMIM4Q8WVI0 70 aa7.05□□□□□ -1.28
ATXN3-249ENST00000564606 HGDQ93099 445 aa7.05□□□□□ -1.28
ATXN3-249ENST00000564606 ARMC5Q96C12 935 aa7.05□□□□□ -1.28
ATXN3-249ENST00000564606 NXPE2Q96DL1 559 aa7.05□□□□□ -1.28
ATXN3-249ENST00000564606 SCMH1Q96GD3 660 aa7.05□□□□□ -1.28
ATXN3-249ENST00000564606 RNF170Q96K19 258 aa7.05□□□□□ -1.28
ATXN3-249ENST00000564606 ART5Q96L15 291 aa7.05□□□□□ -1.28
ATXN3-249ENST00000564606 DGAT2Q96PD7 388 aa7.05□□□□□ -1.28
ATXN3-249ENST00000564606 DCLRE1CQ96SD1 692 aaKnown RBP7.05□□□□□ -1.28
ATXN3-249ENST00000564606 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.05□□□□□ -1.28
ATXN3-249ENST00000564606 IRF2BPLQ9H1B7 796 aa7.05□□□□□ -1.28
ATXN3-249ENST00000564606 C8orf33Q9H7E9 229 aaPredicted RBP7.05□□□□□ -1.28
ATXN3-249ENST00000564606 ERVMER34-1Q9H9K5 563 aa7.05□□□□□ -1.28
ATXN3-249ENST00000564606 PLEKHA1Q9HB21 404 aa7.05□□□□□ -1.28
ATXN3-249ENST00000564606 TCF7L1Q9HCS4 588 aa7.05□□□□□ -1.28
ATXN3-249ENST00000564606 BRD7Q9NPI1 651 aa7.05□□□□□ -1.28
ATXN3-249ENST00000564606 MEPEQ9NQ76 525 aaPredicted RBP7.05□□□□□ -1.28
ATXN3-249ENST00000564606 EPHA6Q9UF33 1036 aa7.05□□□□□ -1.28
ATXN3-249ENST00000564606 UBQLN2Q9UHD9 624 aa7.05□□□□□ -1.28
ATXN3-249ENST00000564606 NUP50Q9UKX7 468 aa7.05□□□□□ -1.28
ATXN3-249ENST00000564606 ZNF281Q9Y2X9 895 aa7.05□□□□□ -1.28
ATXN3-249ENST00000564606 HSPB11Q9Y547 144 aa7.05□□□□□ -1.28
ATXN3-249ENST00000564606 MAB21L2Q9Y586 359 aa7.05□□□□□ -1.28
ATXN3-249ENST00000564606 CLCA3PQ9Y6N3 262 aa7.05□□□□□ -1.28
ATXN3-249ENST00000564606 A0A0G2JMP0 313 aa7.04□□□□□ -1.28
ATXN3-249ENST00000564606 A0A0X1KG70 313 aa7.04□□□□□ -1.28
ATXN3-249ENST00000564606 C2orf92A0A1B0GVN3 265 aa7.04□□□□□ -1.28
ATXN3-249ENST00000564606 OR6C74A6NCV1 312 aa7.04□□□□□ -1.28
ATXN3-249ENST00000564606 SNRPGP15A8MWD9 76 aa7.04□□□□□ -1.28
ATXN3-249ENST00000564606 AIPO00170 330 aa7.04□□□□□ -1.28
ATXN3-249ENST00000564606 SOCS6O14544 535 aa7.04□□□□□ -1.28
ATXN3-249ENST00000564606 EEF1E1O43324 174 aaKnown RBP7.04□□□□□ -1.28
ATXN3-249ENST00000564606 GALR3O60755 368 aaPredicted RBP7.04□□□□□ -1.28
ATXN3-249ENST00000564606 KRT33AO76009 404 aa7.04□□□□□ -1.28
ATXN3-249ENST00000564606 RGS11O94810 467 aa7.04□□□□□ -1.28
ATXN3-249ENST00000564606 GLCEO94923 617 aa7.04□□□□□ -1.28
ATXN3-249ENST00000564606 ZIC2O95409 532 aaPredicted RBP7.04□□□□□ -1.28
ATXN3-249ENST00000564606 RENP00797 406 aa7.04□□□□□ -1.28
ATXN3-249ENST00000564606 IL5P05113 134 aa7.04□□□□□ -1.28
ATXN3-249ENST00000564606 TPOP07202 933 aa7.04□□□□□ -1.28
ATXN3-249ENST00000564606 ADRA2AP08913 450 aa7.04□□□□□ -1.28
ATXN3-249ENST00000564606 FAM157BP0CG42 384 aa7.04□□□□□ -1.28
ATXN3-249ENST00000564606 EPXP11678 715 aa7.04□□□□□ -1.28
ATXN3-249ENST00000564606 HOXB2P14652 356 aa7.04□□□□□ -1.28
ATXN3-249ENST00000564606 CPN1P15169 458 aa7.04□□□□□ -1.28
ATXN3-249ENST00000564606 FUT4P22083 530 aa7.04□□□□□ -1.28
ATXN3-249ENST00000564606 GDI1P31150 447 aa7.04□□□□□ -1.28
ATXN3-249ENST00000564606 MAT2AP31153 395 aaKnown RBP7.04□□□□□ -1.28
ATXN3-249ENST00000564606 ADH7P40394 386 aa7.04□□□□□ -1.28
ATXN3-249ENST00000564606 ART1P52961 327 aa7.04□□□□□ -1.28
ATXN3-249ENST00000564606 AP2S1P53680 142 aaPredicted RBP7.04□□□□□ -1.28
ATXN3-249ENST00000564606 ADPRHP54922 357 aa7.04□□□□□ -1.28
ATXN3-249ENST00000564606 SRP54P61011 504 aaKnown RBP7.04□□□□□ -1.28
ATXN3-249ENST00000564606 RAP2BP61225 183 aa7.04□□□□□ -1.28
ATXN3-249ENST00000564606 SIM1P81133 766 aaPredicted RBP7.04□□□□□ -1.28
ATXN3-249ENST00000564606 RASGEF1BQ0VAM2 473 aa7.04□□□□□ -1.28
ATXN3-249ENST00000564606 FGFBP1Q14512 234 aa7.04□□□□□ -1.28
ATXN3-249ENST00000564606 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.04□□□□□ -1.28
ATXN3-249ENST00000564606 PRICKLE4Q2TBC4 344 aa7.04□□□□□ -1.28
ATXN3-249ENST00000564606 TCTE1Q5JU00 501 aa7.04□□□□□ -1.28
ATXN3-249ENST00000564606 C6orf183Q5T699 404 aa7.04□□□□□ -1.28
ATXN3-249ENST00000564606 FHL5Q5TD97 284 aa7.04□□□□□ -1.28
ATXN3-249ENST00000564606 FCRL6Q6DN72 434 aa7.04□□□□□ -1.28
ATXN3-249ENST00000564606 WBP2NLQ6ICG8 309 aa7.04□□□□□ -1.28
ATXN3-249ENST00000564606 FBXO42Q6P3S6 717 aa7.04□□□□□ -1.28
ATXN3-249ENST00000564606 VN1R4Q7Z5H5 301 aa7.04□□□□□ -1.28
ATXN3-249ENST00000564606 SPICQ8N5J4 248 aa7.04□□□□□ -1.28
ATXN3-249ENST00000564606 MEIOBQ8N635 442 aa7.04□□□□□ -1.28
ATXN3-249ENST00000564606 SIRT6Q8N6T7 355 aa7.04□□□□□ -1.28
ATXN3-249ENST00000564606 CSNK1A1LQ8N752 337 aa7.04□□□□□ -1.28
ATXN3-249ENST00000564606 ZFP41Q8N8Y5 198 aa7.04□□□□□ -1.28
ATXN3-249ENST00000564606 AMER3Q8N944 861 aa7.04□□□□□ -1.28
ATXN3-249ENST00000564606 OR4M2Q8NGB6 313 aa7.04□□□□□ -1.28
ATXN3-249ENST00000564606 OR4M1Q8NGD0 313 aa7.04□□□□□ -1.28
ATXN3-249ENST00000564606 OR2T4Q8NH00 348 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms