RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.73■□□□□ 0.43
SHCBP1-203ENST00000564272 HMGB1P1B2RPK0 211 aaPredicted RBP17.73■□□□□ 0.43
SHCBP1-203ENST00000564272 NUDT7P0C024 238 aa17.73■□□□□ 0.43
SHCBP1-203ENST00000564272 HOXB9P17482 250 aaPredicted RBP17.73■□□□□ 0.43
SHCBP1-203ENST00000564272 CRISP3P54108 245 aa17.73■□□□□ 0.43
SHCBP1-203ENST00000564272 PPP2R2AP63151 447 aa17.73■□□□□ 0.43
SHCBP1-203ENST00000564272 EPS8Q12929 822 aa17.73■□□□□ 0.43
SHCBP1-203ENST00000564272 LIN52Q52LA3 116 aa17.73■□□□□ 0.43
SHCBP1-203ENST00000564272 TGIF2LYQ8IUE0 185 aa17.73■□□□□ 0.43
SHCBP1-203ENST00000564272 FUNDC1Q8IVP5 155 aa17.73■□□□□ 0.43
SHCBP1-203ENST00000564272 OR52P1PQ8NH57 321 aa17.73■□□□□ 0.43
SHCBP1-203ENST00000564272 PMM1Q92871 262 aa17.73■□□□□ 0.43
SHCBP1-203ENST00000564272 S100PBPQ96BU1 408 aa17.73■□□□□ 0.43
SHCBP1-203ENST00000564272 INTS9Q9NV88 658 aaKnown RBP17.73■□□□□ 0.43
SHCBP1-203ENST00000564272 ARGLU1Q9NWB6 273 aaPredicted RBP17.73■□□□□ 0.43
SHCBP1-203ENST00000564272 CALML5Q9NZT1 146 aa17.73■□□□□ 0.43
SHCBP1-203ENST00000564272 PRSS50Q9UI38 385 aa17.73■□□□□ 0.43
SHCBP1-203ENST00000564272 OSGIN1Q9UJX0 560 aa17.73■□□□□ 0.43
SHCBP1-203ENST00000564272 TMED7-TICAM2A0A0A6YYA0 188 aa17.72■□□□□ 0.43
SHCBP1-203ENST00000564272 TMEM72A0PK05 275 aa17.72■□□□□ 0.43
SHCBP1-203ENST00000564272 CDHR4A6H8M9 788 aa17.72■□□□□ 0.43
SHCBP1-203ENST00000564272 CFAP73A6NFT4 308 aa17.72■□□□□ 0.43
SHCBP1-203ENST00000564272 ZNF814B7Z6K7 855 aa17.72■□□□□ 0.43
SHCBP1-203ENST00000564272 KLF4O43474 513 aa17.72■□□□□ 0.43
SHCBP1-203ENST00000564272 ADAP00813 363 aa17.72■□□□□ 0.43
SHCBP1-203ENST00000564272 GKN3PP0CG01 181 aa17.72■□□□□ 0.43
SHCBP1-203ENST00000564272 TACR3P29371 465 aa17.72■□□□□ 0.43
SHCBP1-203ENST00000564272 POLR2HP52434 150 aaKnown RBP17.72■□□□□ 0.43
SHCBP1-203ENST00000564272 BEX5Q5H9J7 111 aa17.72■□□□□ 0.43
SHCBP1-203ENST00000564272 ALKBH2Q6NS38 261 aa17.72■□□□□ 0.43
SHCBP1-203ENST00000564272 MTDHQ86UE4 582 aaKnown RBP17.72■□□□□ 0.43
SHCBP1-203ENST00000564272 MSRB3Q8IXL7 192 aa17.72■□□□□ 0.43
SHCBP1-203ENST00000564272 THOC1Q96FV9 657 aaKnown RBP17.72■□□□□ 0.43
SHCBP1-203ENST00000564272 OR10A4Q9H209 315 aa17.72■□□□□ 0.43
SHCBP1-203ENST00000564272 VIPAS39Q9H9C1 493 aa17.72■□□□□ 0.43
SHCBP1-203ENST00000564272 SLC25A37Q9NYZ2 338 aa17.72■□□□□ 0.43
SHCBP1-203ENST00000564272 CCDC167Q9P0B6 97 aa17.72■□□□□ 0.43
SHCBP1-203ENST00000564272 ZNF443Q9Y2A4 671 aaPredicted RBP17.72■□□□□ 0.43
SHCBP1-203ENST00000564272 TMED7Q9Y3B3 224 aa17.72■□□□□ 0.43
SHCBP1-203ENST00000564272 HDGFL3Q9Y3E1 203 aa17.72■□□□□ 0.43
SHCBP1-203ENST00000564272 A0A096LPI6 279 aa17.71■□□□□ 0.43
SHCBP1-203ENST00000564272 ZNF724A8MTY0 619 aa17.71■□□□□ 0.43
SHCBP1-203ENST00000564272 CLIC1O00299 241 aa17.71■□□□□ 0.43
SHCBP1-203ENST00000564272 FAAHO00519 579 aa17.71■□□□□ 0.43
SHCBP1-203ENST00000564272 PMS2P2O95744 297 aa17.71■□□□□ 0.43
SHCBP1-203ENST00000564272 SLC1A3P43003 542 aa17.71■□□□□ 0.43
SHCBP1-203ENST00000564272 HTR3AP46098 478 aa17.71■□□□□ 0.43
SHCBP1-203ENST00000564272 OR3A2P47893 321 aa17.71■□□□□ 0.43
SHCBP1-203ENST00000564272 RGNQ15493 299 aa17.71■□□□□ 0.43
SHCBP1-203ENST00000564272 SFRP5Q5T4F7 317 aa17.71■□□□□ 0.43
SHCBP1-203ENST00000564272 BLOC1S3Q6QNY0 202 aa17.71■□□□□ 0.43
SHCBP1-203ENST00000564272 STEAP2Q8NFT2 490 aa17.71■□□□□ 0.43
SHCBP1-203ENST00000564272 CKAP2Q8WWK9 683 aa17.71■□□□□ 0.43
SHCBP1-203ENST00000564272 MAL2Q969L2 176 aa17.71■□□□□ 0.43
SHCBP1-203ENST00000564272 SPDL1Q96EA4 605 aa17.71■□□□□ 0.43
SHCBP1-203ENST00000564272 ZHX1-C8orf76Q96EF9 292 aa17.71■□□□□ 0.43
SHCBP1-203ENST00000564272 TMUB1Q9BVT8 246 aa17.71■□□□□ 0.43
SHCBP1-203ENST00000564272 RAI1Q7Z5J4 1906 aaPredicted RBP17.7■□□□□ 0.42
SHCBP1-203ENST00000564272 ZC3H12DA2A288 527 aaKnown RBP17.7■□□□□ 0.42
SHCBP1-203ENST00000564272 RAMP1O60894 148 aa17.7■□□□□ 0.42
SHCBP1-203ENST00000564272 SASH3O75995 380 aa17.7■□□□□ 0.42
SHCBP1-203ENST00000564272 CD99P14209 185 aa17.7■□□□□ 0.42
SHCBP1-203ENST00000564272 UQCRBP14927 111 aa17.7■□□□□ 0.42
SHCBP1-203ENST00000564272 IL32P24001 234 aa17.7■□□□□ 0.42
SHCBP1-203ENST00000564272 OR2B6P58173 313 aa17.7■□□□□ 0.42
SHCBP1-203ENST00000564272 ADAM8P78325 824 aa17.7■□□□□ 0.42
SHCBP1-203ENST00000564272 FOXD4Q12950 439 aaPredicted RBP17.7■□□□□ 0.42
SHCBP1-203ENST00000564272 RNF220Q5VTB9 566 aa17.7■□□□□ 0.42
SHCBP1-203ENST00000564272 GALNT5Q7Z7M9 940 aa17.7■□□□□ 0.42
SHCBP1-203ENST00000564272 ZNF440Q8IYI8 595 aa17.7■□□□□ 0.42
SHCBP1-203ENST00000564272 CLIP4Q8N3C7 705 aa17.7■□□□□ 0.42
SHCBP1-203ENST00000564272 KISS1RQ969F8 398 aaPredicted RBP17.7■□□□□ 0.42
SHCBP1-203ENST00000564272 PLPPR2Q96GM1 343 aa17.7■□□□□ 0.42
SHCBP1-203ENST00000564272 A4GALTQ9NPC4 353 aa17.7■□□□□ 0.42
SHCBP1-203ENST00000564272 SLC52A3Q9NQ40 469 aa17.7■□□□□ 0.42
SHCBP1-203ENST00000564272 BEX4Q9NWD9 120 aaPredicted RBP17.7■□□□□ 0.42
SHCBP1-203ENST00000564272 THUMPD1Q9NXG2 353 aaKnown RBP17.7■□□□□ 0.42
SHCBP1-203ENST00000564272 SLAMF8Q9P0V8 285 aa17.7■□□□□ 0.42
SHCBP1-203ENST00000564272 CHST2Q9Y4C5 530 aa17.7■□□□□ 0.42
SHCBP1-203ENST00000564272 MAP1AP78559 2803 aaPredicted RBP17.69■□□□□ 0.42
SHCBP1-203ENST00000564272 IGKV3D-15A0A087WSY6 115 aa17.69■□□□□ 0.42
SHCBP1-203ENST00000564272 TMEM247A6NEH6 219 aa17.69■□□□□ 0.42
SHCBP1-203ENST00000564272 ZNF716A6NP11 495 aa17.69■□□□□ 0.42
SHCBP1-203ENST00000564272 ZNF208O43345 1280 aa17.69■□□□□ 0.42
SHCBP1-203ENST00000564272 PRG2P13727 222 aa17.69■□□□□ 0.42
SHCBP1-203ENST00000564272 FKBP2P26885 142 aaKnown RBP17.69■□□□□ 0.42
SHCBP1-203ENST00000564272 ACAA2P42765 397 aaKnown RBP17.69■□□□□ 0.42
SHCBP1-203ENST00000564272 CLK1P49759 484 aaKnown RBP17.69■□□□□ 0.42
SHCBP1-203ENST00000564272 FADDQ13158 208 aa17.69■□□□□ 0.42
SHCBP1-203ENST00000564272 SQLEQ14534 574 aa17.69■□□□□ 0.42
SHCBP1-203ENST00000564272 ACKR1Q16570 336 aa17.69■□□□□ 0.42
SHCBP1-203ENST00000564272 AGKQ53H12 422 aa17.69■□□□□ 0.42
SHCBP1-203ENST00000564272 PAGE3Q5JUK9 113 aa17.69■□□□□ 0.42
SHCBP1-203ENST00000564272 LRIF1Q5T3J3 769 aa17.69■□□□□ 0.42
SHCBP1-203ENST00000564272 Q6ZT83 130 aa17.69■□□□□ 0.42
SHCBP1-203ENST00000564272 CCDC103Q8IW40 242 aa17.69■□□□□ 0.42
SHCBP1-203ENST00000564272 CADM2Q8N3J6 435 aa17.69■□□□□ 0.42
SHCBP1-203ENST00000564272 WFDC11Q8NEX6 87 aa17.69■□□□□ 0.42
SHCBP1-203ENST00000564272 PIGXQ8TBF5 258 aa17.69■□□□□ 0.42
SHCBP1-203ENST00000564272 DDIT4LQ96D03 193 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms