RNA–Protein interactions for RNA: ENST00000563939.2

CBFB-204, Transcript of core-binding factor subunit beta, humanhuman

TSL 4

Gene CBFB, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBFB-204ENST00000563939 IFT52Q9Y366 437 aa17.11■□□□□ 0.33
CBFB-204ENST00000563939 HEATR5AQ86XA9 2040 aa17.1■□□□□ 0.33
CBFB-204ENST00000563939 EVPLLA8MZ36 301 aa17.1■□□□□ 0.33
CBFB-204ENST00000563939 SMAD9O15198 467 aaKnown RBP17.1■□□□□ 0.33
CBFB-204ENST00000563939 FESP07332 822 aa17.1■□□□□ 0.33
CBFB-204ENST00000563939 HOXB9P17482 250 aaPredicted RBP17.1■□□□□ 0.33
CBFB-204ENST00000563939 KLK2P20151 261 aa17.1■□□□□ 0.33
CBFB-204ENST00000563939 CLK1P49759 484 aaKnown RBP17.1■□□□□ 0.33
CBFB-204ENST00000563939 OR2B6P58173 313 aa17.1■□□□□ 0.33
CBFB-204ENST00000563939 COPZ1P61923 177 aa17.1■□□□□ 0.33
CBFB-204ENST00000563939 SF3A3Q12874 501 aaKnown RBP eCLIP17.1■□□□□ 0.335e-6■■■■■ 39.5
CBFB-204ENST00000563939 ZSWIM7Q19AV6 140 aa17.1■□□□□ 0.33
CBFB-204ENST00000563939 ZNF311Q5JNZ3 666 aa17.1■□□□□ 0.33
CBFB-204ENST00000563939 GCNT6Q5T4J0 391 aa17.1■□□□□ 0.33
CBFB-204ENST00000563939 MTDHQ86UE4 582 aaKnown RBP17.1■□□□□ 0.33
CBFB-204ENST00000563939 CADM2Q8N3J6 435 aa17.1■□□□□ 0.33
CBFB-204ENST00000563939 STON2Q8WXE9 905 aa17.1■□□□□ 0.33
CBFB-204ENST00000563939 ARL5BQ96KC2 179 aa17.1■□□□□ 0.33
CBFB-204ENST00000563939 TACO1Q9BSH4 297 aaKnown RBP17.1■□□□□ 0.33
CBFB-204ENST00000563939 OSGIN1Q9UJX0 560 aa17.1■□□□□ 0.33
CBFB-204ENST00000563939 NDUFAF1Q9Y375 327 aa17.1■□□□□ 0.33
CBFB-204ENST00000563939 HDGFL3Q9Y3E1 203 aa17.1■□□□□ 0.33
CBFB-204ENST00000563939 DSPPQ9NZW4 1301 aa17.1■□□□□ 0.33
CBFB-204ENST00000563939 OTOGQ6ZRI0 2925 aa17.1■□□□□ 0.33
CBFB-204ENST00000563939 FAAHO00519 579 aa17.09■□□□□ 0.33
CBFB-204ENST00000563939 ANGPT2O15123 496 aa17.09■□□□□ 0.33
CBFB-204ENST00000563939 CYTIPO60759 359 aa17.09■□□□□ 0.33
CBFB-204ENST00000563939 GOSR1O95249 250 aa17.09■□□□□ 0.33
CBFB-204ENST00000563939 PGM3O95394 542 aa17.09■□□□□ 0.33
CBFB-204ENST00000563939 HRGP04196 525 aa17.09■□□□□ 0.33
CBFB-204ENST00000563939 THBS1P07996 1170 aa17.09■□□□□ 0.33
CBFB-204ENST00000563939 VIMP08670 466 aaKnown RBP17.09■□□□□ 0.33
CBFB-204ENST00000563939 TROVE2P10155 538 aaKnown RBP eCLIP17.09■□□□□ 0.33
CBFB-204ENST00000563939 BMP2P12643 396 aa17.09■□□□□ 0.33
CBFB-204ENST00000563939 CXCR1P25024 350 aa17.09■□□□□ 0.33
CBFB-204ENST00000563939 CCKARP32238 428 aa17.09■□□□□ 0.33
CBFB-204ENST00000563939 IST1P53990 364 aa17.09■□□□□ 0.33
CBFB-204ENST00000563939 METTL21CQ5VZV1 264 aa17.09■□□□□ 0.33
CBFB-204ENST00000563939 STAC2Q6ZMT1 411 aa17.09■□□□□ 0.33
CBFB-204ENST00000563939 NFKBIDQ8NI38 313 aa17.09■□□□□ 0.33
CBFB-204ENST00000563939 BBS10Q8TAM1 723 aa17.09■□□□□ 0.33
CBFB-204ENST00000563939 DDIT4LQ96D03 193 aa17.09■□□□□ 0.33
CBFB-204ENST00000563939 SPATA9Q9BWV2 254 aa17.09■□□□□ 0.33
CBFB-204ENST00000563939 BCL2L10Q9HD36 194 aa17.09■□□□□ 0.33
CBFB-204ENST00000563939 ST6GALNAC2Q9UJ37 374 aa17.09■□□□□ 0.33
CBFB-204ENST00000563939 LEF1Q9UJU2 399 aaPredicted RBP17.09■□□□□ 0.33
CBFB-204ENST00000563939 SPG11Q96JI7 2443 aa17.08■□□□□ 0.33
CBFB-204ENST00000563939 TMEM72A0PK05 275 aa17.08■□□□□ 0.32
CBFB-204ENST00000563939 PMS2P2O95744 297 aa17.08■□□□□ 0.32
CBFB-204ENST00000563939 PRG2P13727 222 aa17.08■□□□□ 0.32
CBFB-204ENST00000563939 DNASE1P24855 282 aa17.08■□□□□ 0.32
CBFB-204ENST00000563939 ACAA2P42765 397 aaKnown RBP17.08■□□□□ 0.32
CBFB-204ENST00000563939 ART1P52961 327 aa17.08■□□□□ 0.32
CBFB-204ENST00000563939 CDK6Q00534 326 aa17.08■□□□□ 0.32
CBFB-204ENST00000563939 PRAMEF8Q5VWM4 474 aa17.08■□□□□ 0.32
CBFB-204ENST00000563939 PRAMEF7Q5VXH5 474 aa17.08■□□□□ 0.32
CBFB-204ENST00000563939 ALKBH2Q6NS38 261 aa17.08■□□□□ 0.32
CBFB-204ENST00000563939 DLEU7Q6UYE1 221 aa17.08■□□□□ 0.32
CBFB-204ENST00000563939 PIK3IP1Q96FE7 263 aa17.08■□□□□ 0.32
CBFB-204ENST00000563939 PSD2Q9BQI7 771 aa17.08■□□□□ 0.32
CBFB-204ENST00000563939 TMEM120AQ9BXJ8 343 aa17.08■□□□□ 0.32
CBFB-204ENST00000563939 ADAM19Q9H013 955 aa17.08■□□□□ 0.32
CBFB-204ENST00000563939 BCO1Q9HAY6 547 aa17.08■□□□□ 0.32
CBFB-204ENST00000563939 CCM2LQ9NUG4 571 aaPredicted RBP17.08■□□□□ 0.32
CBFB-204ENST00000563939 TMEM181Q9P2C4 612 aa17.08■□□□□ 0.32
CBFB-204ENST00000563939 CORO2BQ9UQ03 480 aa17.08■□□□□ 0.32
CBFB-204ENST00000563939 PLEKHA6Q9Y2H5 1048 aa17.08■□□□□ 0.32
CBFB-204ENST00000563939 CSMD2Q7Z408 3487 aa17.07■□□□□ 0.32
CBFB-204ENST00000563939 ZNF208O43345 1280 aa17.07■□□□□ 0.32
CBFB-204ENST00000563939 PPP3CBP16298 524 aa17.07■□□□□ 0.32
CBFB-204ENST00000563939 RNF220Q5VTB9 566 aa17.07■□□□□ 0.32
CBFB-204ENST00000563939 WBP2NLQ6ICG8 309 aa17.07■□□□□ 0.32
CBFB-204ENST00000563939 REEP3Q6NUK4 255 aa17.07■□□□□ 0.32
CBFB-204ENST00000563939 TFAP2EQ6VUC0 442 aa17.07■□□□□ 0.32
CBFB-204ENST00000563939 C22orf34Q6ZV56 151 aa17.07■□□□□ 0.32
CBFB-204ENST00000563939 GALNT5Q7Z7M9 940 aa17.07■□□□□ 0.32
CBFB-204ENST00000563939 CXorf67Q86X51 503 aaPredicted RBP17.07■□□□□ 0.32
CBFB-204ENST00000563939 KRT73Q86Y46 540 aa17.07■□□□□ 0.32
CBFB-204ENST00000563939 ZNF100Q8IYN0 542 aa17.07■□□□□ 0.32
CBFB-204ENST00000563939 C10orf111Q8N326 155 aa17.07■□□□□ 0.32
CBFB-204ENST00000563939 ZNF300Q96RE9 604 aaPredicted RBP17.07■□□□□ 0.32
CBFB-204ENST00000563939 HDHD5Q9BXW7 423 aa17.07■□□□□ 0.32
CBFB-204ENST00000563939 ACTR6Q9GZN1 396 aa17.07■□□□□ 0.32
CBFB-204ENST00000563939 ZNF385DQ9H6B1 395 aa17.07■□□□□ 0.32
CBFB-204ENST00000563939 FGFR1OP2Q9NVK5 253 aa17.07■□□□□ 0.32
CBFB-204ENST00000563939 ING1Q9UK53 422 aaPredicted RBP17.07■□□□□ 0.32
CBFB-204ENST00000563939 TRAPPC4Q9Y296 219 aa17.07■□□□□ 0.32
CBFB-204ENST00000563939 GPR52Q9Y2T5 361 aa17.07■□□□□ 0.32
CBFB-204ENST00000563939 CSMD1Q96PZ7 3565 aa17.07■□□□□ 0.32
CBFB-204ENST00000563939 ANKRD17O75179 2603 aaKnown RBP17.07■□□□□ 0.32
CBFB-204ENST00000563939 CCDC168Q8NDH2 2452 aa17.07■□□□□ 0.32
CBFB-204ENST00000563939 TRBV5-3A0A0A0MS03 114 aa17.06■□□□□ 0.32
CBFB-204ENST00000563939 ZNF724A8MTY0 619 aa17.06■□□□□ 0.32
CBFB-204ENST00000563939 ADAP00813 363 aa17.06■□□□□ 0.32
CBFB-204ENST00000563939 ARAFP10398 606 aa17.06■□□□□ 0.32
CBFB-204ENST00000563939 ETS2P15036 469 aa17.06■□□□□ 0.32
CBFB-204ENST00000563939 GPX2P18283 190 aa17.06■□□□□ 0.32
CBFB-204ENST00000563939 FPR1P21462 350 aa17.06■□□□□ 0.32
CBFB-204ENST00000563939 CRYGSP22914 178 aa17.06■□□□□ 0.32
CBFB-204ENST00000563939 SLC6A2P23975 617 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms