RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 GALNT5Q7Z7M9 940 aa15.67■□□□□ 0.1
NME3-205ENST00000563854 BIVMQ86UB2 503 aa15.67■□□□□ 0.1
NME3-205ENST00000563854 UBE2J2Q8N2K1 259 aa15.67■□□□□ 0.1
NME3-205ENST00000563854 TMEM171Q8WVE6 324 aa15.67■□□□□ 0.1
NME3-205ENST00000563854 POTEKPQ9BYX7 375 aa15.67■□□□□ 0.1
NME3-205ENST00000563854 SLC6A13Q9NSD5 602 aa15.67■□□□□ 0.1
NME3-205ENST00000563854 EMC3Q9P0I2 261 aa15.67■□□□□ 0.1
NME3-205ENST00000563854 P2RX2Q9UBL9 471 aa15.67■□□□□ 0.1
NME3-205ENST00000563854 RAI1Q7Z5J4 1906 aaPredicted RBP15.66■□□□□ 0.1
NME3-205ENST00000563854 TMED7-TICAM2A0A0A6YYA0 188 aa15.66■□□□□ 0.1
NME3-205ENST00000563854 H7C1Q1 480 aa15.66■□□□□ 0.1
NME3-205ENST00000563854 SMAD7O15105 426 aaKnown RBP15.66■□□□□ 0.1
NME3-205ENST00000563854 UBDO15205 165 aa15.66■□□□□ 0.1
NME3-205ENST00000563854 IL6P05231 212 aa15.66■□□□□ 0.1
NME3-205ENST00000563854 BCHEP06276 602 aa15.66■□□□□ 0.1
NME3-205ENST00000563854 ETFAP13804 333 aa15.66■□□□□ 0.1
NME3-205ENST00000563854 PTH2RP49190 550 aa15.66■□□□□ 0.1
NME3-205ENST00000563854 SLC18A1P54219 525 aa15.66■□□□□ 0.1
NME3-205ENST00000563854 TXNL4AP83876 142 aaKnown RBP15.66■□□□□ 0.1
NME3-205ENST00000563854 GTDC1Q4AE62 458 aa15.66■□□□□ 0.1
NME3-205ENST00000563854 C6orf10Q5SRN2 563 aa15.66■□□□□ 0.1
NME3-205ENST00000563854 BEND6Q5SZJ8 279 aaPredicted RBP15.66■□□□□ 0.1
NME3-205ENST00000563854 MRPL2Q5T653 305 aaKnown RBP15.66■□□□□ 0.1
NME3-205ENST00000563854 ABLIM2Q6H8Q1 611 aa15.66■□□□□ 0.1
NME3-205ENST00000563854 ATG4DQ86TL0 474 aaPredicted RBP15.66■□□□□ 0.1
NME3-205ENST00000563854 MTDHQ86UE4 582 aaKnown RBP15.66■□□□□ 0.1
NME3-205ENST00000563854 CMIPQ8IY22 773 aa15.66■□□□□ 0.1
NME3-205ENST00000563854 OR9I1Q8NGQ6 314 aa15.66■□□□□ 0.1
NME3-205ENST00000563854 PIWIL2Q8TC59 973 aaKnown RBP15.66■□□□□ 0.1
NME3-205ENST00000563854 HSD17B8Q92506 261 aa15.66■□□□□ 0.1
NME3-205ENST00000563854 ZNF75CPQ92670 426 aaPredicted RBP15.66■□□□□ 0.1
NME3-205ENST00000563854 AURKBQ96GD4 344 aaPredicted RBP15.66■□□□□ 0.1
NME3-205ENST00000563854 POM121Q96HA1 1249 aa15.66■□□□□ 0.1
NME3-205ENST00000563854 MAELQ96JY0 434 aaKnown RBP15.66■□□□□ 0.1
NME3-205ENST00000563854 ESRP2Q9H6T0 727 aaKnown RBP15.66■□□□□ 0.1
NME3-205ENST00000563854 RMND5AQ9H871 391 aa15.66■□□□□ 0.1
NME3-205ENST00000563854 NGBQ9NPG2 151 aa15.66■□□□□ 0.1
NME3-205ENST00000563854 NOSIPQ9Y314 301 aaKnown RBP15.66■□□□□ 0.1
NME3-205ENST00000563854 TMED7Q9Y3B3 224 aa15.66■□□□□ 0.1
NME3-205ENST00000563854 RNF115Q9Y4L5 304 aa15.66■□□□□ 0.1
NME3-205ENST00000563854 ZNF724A8MTY0 619 aa15.65■□□□□ 0.1
NME3-205ENST00000563854 PMS2P2O95744 297 aa15.65■□□□□ 0.1
NME3-205ENST00000563854 DBIP07108 87 aaKnown RBP15.65■□□□□ 0.1
NME3-205ENST00000563854 CD3EP07766 207 aa15.65■□□□□ 0.1
NME3-205ENST00000563854 UQCRBP14927 111 aa15.65■□□□□ 0.1
NME3-205ENST00000563854 TACR3P29371 465 aa15.65■□□□□ 0.1
NME3-205ENST00000563854 POLR2HP52434 150 aaKnown RBP15.65■□□□□ 0.1
NME3-205ENST00000563854 GSTA3Q16772 222 aa15.65■□□□□ 0.1
NME3-205ENST00000563854 CLEC9AQ6UXN8 241 aa15.65■□□□□ 0.1
NME3-205ENST00000563854 ADGRG3Q86Y34 549 aa15.65■□□□□ 0.1
NME3-205ENST00000563854 PEX5LQ8IYB4 626 aa15.65■□□□□ 0.1
NME3-205ENST00000563854 PIGXQ8TBF5 258 aa15.65■□□□□ 0.1
NME3-205ENST00000563854 VPS33AQ96AX1 596 aa15.65■□□□□ 0.1
NME3-205ENST00000563854 ITCHQ96J02 903 aa15.65■□□□□ 0.1
NME3-205ENST00000563854 TMEM204Q9BSN7 226 aa15.65■□□□□ 0.1
NME3-205ENST00000563854 MTHFD2LQ9H903 347 aaPredicted RBP15.65■□□□□ 0.1
NME3-205ENST00000563854 ZIM2Q9NZV7 527 aa15.65■□□□□ 0.1
NME3-205ENST00000563854 HDGFL3Q9Y3E1 203 aa15.65■□□□□ 0.1
NME3-205ENST00000563854 VPS13CQ709C8 3753 aa15.65■□□□□ 0.1
NME3-205ENST00000563854 DSCAMO60469 2012 aa15.65■□□□□ 0.1
NME3-205ENST00000563854 TMEM72A0PK05 275 aa15.64■□□□□ 0.09
NME3-205ENST00000563854 CFAP73A6NFT4 308 aa15.64■□□□□ 0.09
NME3-205ENST00000563854 TRIM64A6NGJ6 449 aa15.64■□□□□ 0.09
NME3-205ENST00000563854 TRIM64BA6NI03 449 aa15.64■□□□□ 0.09
NME3-205ENST00000563854 IGHV1-2P23083 117 aa15.64■□□□□ 0.09
NME3-205ENST00000563854 HTR3AP46098 478 aa15.64■□□□□ 0.09
NME3-205ENST00000563854 POLR2JP52435 117 aaKnown RBP15.64■□□□□ 0.09
NME3-205ENST00000563854 DSTNP60981 165 aa15.64■□□□□ 0.09
NME3-205ENST00000563854 PPA1Q15181 289 aa15.64■□□□□ 0.09
NME3-205ENST00000563854 RPS26P11Q5JNZ5 115 aaPredicted RBP15.64■□□□□ 0.09
NME3-205ENST00000563854 NCMAPQ5T1S8 102 aa15.64■□□□□ 0.09
NME3-205ENST00000563854 ADAM5Q6NVV9 412 aa15.64■□□□□ 0.09
NME3-205ENST00000563854 VRK2Q86Y07 508 aa15.64■□□□□ 0.09
NME3-205ENST00000563854 CCDC103Q8IW40 242 aa15.64■□□□□ 0.09
NME3-205ENST00000563854 MIER2Q8N344 545 aa15.64■□□□□ 0.09
NME3-205ENST00000563854 CIARTQ8N365 385 aaPredicted RBP15.64■□□□□ 0.09
NME3-205ENST00000563854 CADM2Q8N3J6 435 aa15.64■□□□□ 0.09
NME3-205ENST00000563854 ZNF611Q8N823 705 aa15.64■□□□□ 0.09
NME3-205ENST00000563854 OR52P1PQ8NH57 321 aa15.64■□□□□ 0.09
NME3-205ENST00000563854 NEUROG1Q92886 237 aa15.64■□□□□ 0.09
NME3-205ENST00000563854 APH1AQ96BI3 265 aa15.64■□□□□ 0.09
NME3-205ENST00000563854 DDIT4LQ96D03 193 aa15.64■□□□□ 0.09
NME3-205ENST00000563854 CXorf56Q9H5V9 222 aa15.64■□□□□ 0.09
NME3-205ENST00000563854 CACYBPQ9HB71 228 aaKnown RBP15.64■□□□□ 0.09
NME3-205ENST00000563854 SDR39U1Q9NRG7 319 aaPredicted RBP15.64■□□□□ 0.09
NME3-205ENST00000563854 RLIMQ9NVW2 624 aa15.64■□□□□ 0.09
NME3-205ENST00000563854 OSGIN1Q9UJX0 560 aa15.64■□□□□ 0.09
NME3-205ENST00000563854 LAMP3Q9UQV4 416 aa15.64■□□□□ 0.09
NME3-205ENST00000563854 USH1CQ9Y6N9 552 aa15.64■□□□□ 0.09
NME3-205ENST00000563854 CCT8L1PA6NM43 557 aa15.63■□□□□ 0.09
NME3-205ENST00000563854 ZNF716A6NP11 495 aa15.63■□□□□ 0.09
NME3-205ENST00000563854 RAMP1O60894 148 aa15.63■□□□□ 0.09
NME3-205ENST00000563854 RAD51DO75771 328 aa15.63■□□□□ 0.09
NME3-205ENST00000563854 GKN3PP0CG01 181 aa15.63■□□□□ 0.09
NME3-205ENST00000563854 RPS4Y1P22090 263 aaKnown RBP15.63■□□□□ 0.09
NME3-205ENST00000563854 MAGEA8P43361 318 aa15.63■□□□□ 0.09
NME3-205ENST00000563854 CRISP3P54108 245 aa15.63■□□□□ 0.09
NME3-205ENST00000563854 STX1BP61266 288 aa15.63■□□□□ 0.09
NME3-205ENST00000563854 LTBQ06643 244 aa15.63■□□□□ 0.09
NME3-205ENST00000563854 BSPH1Q075Z2 132 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms